Busch Lab

ZMP

lrrtm4l1

Ensembl ID:
ENSDARG00000080015
ZFIN ID:
ZDB-GENE-080327-15
Description:
cDNA, clone cssl:d0341 [Source:UniProtKB/TrEMBL;Acc:A8BB40]
Human Orthologue:
LRRTM4
Human Description:
leucine rich repeat transmembrane neuronal 4 [Source:HGNC Symbol;Acc:19411]
Mouse Orthologue:
Lrrtm4
Mouse Description:
leucine rich repeat transmembrane neuronal 4 Gene [Source:MGI Symbol;Acc:MGI:2389180]

Alleles

There are 6 alleles of this gene:

Allele Name Consequence Status Availability
hu3329 Nonsense Available for shipment Available now
sa11361 Nonsense Available for shipment Available now
sa21708 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
hu3329
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > G
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000113737 Nonsense 187 571 2 3
ENSDART00000141364 Nonsense 187 456 2 2
Genomic Location (Zv9):
Chromosome 10 (position 19369203)
Other Location(s):
Assembly Chromosome Position
GRCz10 10 19381549
GRCz11 10 19338983
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTCCGTGCGTTTTTGGAGTGCCGAAGCTTGGAGTTTCTAGACTTGGGCTA[T/G]AATCGGCTTCGGGTTCTAACTCGCACAGCATTCCTAGGTTTGTCTCGACT
Long Flanking Sequence:
CTCCTGCTGTTCAGTTCTGGGGAACGAATGTGCCCCTATAGCTGTCATTGTGAGGGAAAGATTGTCCACTGTGAGTCGTCTGCCTTCCAGGACGTCCCAGAAAATATTTCAGTTAGTTGCCAAGGTCTGTCTCTGCGCTACAATGACCTGCACACAATGCTCCCTTACCAGTTTGCCCATCTCAACCAGTTGCTTTGGCTTTACCTGGACCACAATCAAATCATGTTCGTTGATAGTCGTGCTTTCCAGGGGGTGCGGCGATTGAAGGAGTTGATCTTGAGCTCGAACAGGATTTCACAGCTCCACAATGTCACATTCCATGGAGTACCTAACCTTCGTAGTCTCGATCTGTCCTATAACAAGTTGCAGGAGTTGCAGCCTGGCCAGTTTTATGGTCTTCGAAAACTGCAAAATCTGCACTTGCGTTCAAATGGGCTTACGGCAATCCCTGTCCGTGCGTTTTTGGAGTGCCGAAGCTTGGAGTTTCTAGACTTGGGCTA[T/G]AATCGGCTTCGGGTTCTAACTCGCACAGCATTCCTAGGTTTGTCTCGACTTATGGAACTCCACCTGGAACACAATCAGTTTTCACGAATCAACTTCTTTCTCTTTCCACGCCTTGCCAACCTTCGAGCCCTTTACCTACAGTGGAACCGTATTCGAGCTGTCAACCAAGGCCTTCCGTGGAGCTGGTATACCCTGCAGAGGCTTGACATCTCTGGCAATGAGATACAGGTACTAGATCCTGTAGTCTTTCAATGCCTTCCCAATCTTCAGGTTCTCAACTTGGAGTCTAACAAACTCGCCAATGTCTCTCAGGAAGTTGTGGCTGCCTGGATCTCACTAACAACTATTAGCCTTGCAGGCAATATGTGGGATTGTGGTCCGGGTATTTGTCCTCTTGTTGTCTGGCTCAAGAATTTCAGAGGCACCAAGGACACTAATATAATCTGCAGCAGTCCCAAACACCTTCAAGGGGAAAAAGTCATTGAGGCTTCAAAGAACTA
Associated Phenotype:
Normal
Stage Entity Quality Tag
Larval:Day 5
ZFS:0000037		 whole organism
ZFA:0001094		 quality
PATO:0000001		 normal
PATO:0000461

Mutation Details

Allele Name:
sa11361
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000113737 Nonsense 229 571 2 3
ENSDART00000141364 Nonsense 229 456 2 2
Genomic Location (Zv9):
Chromosome 10 (position 19369327)
Other Location(s):
Assembly Chromosome Position
GRCz10 10 19381673
GRCz11 10 19339107
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ATCAGTTTTCACGAATCAACTTCTTTCTCTTTCCACGCCTTGCCAACCTT[C/T]GAGCCCTTTACCTACAGTGGAACCGTATTCGAGCTGTCAACCAAGGCCTT
Long Flanking Sequence:
GTCTGTCTCTGCGCTACAATGACCTGCACACAATGCTCCCTTACCAGTTTGCCCATCTCAACCAGTTGCTTTGGCTTTACCTGGACCACAATCAAATCATGTTCGTTGATAGTCGTGCTTTCCAGGGGGTGCGGCGATTGAAGGAGTTGATCTTGAGCTCGAACAGGATTTCACAGCTCCACAATGTCACATTCCATGGAGTACCTAACCTTCGTAGTCTCGATCTGTCCTATAACAAGTTGCAGGAGTTGCAGCCTGGCCAGTTTTATGGTCTTCGAAAACTGCAAAATCTGCACTTGCGTTCAAATGGGCTTACGGCAATCCCTGTCCGTGCGTTTTTGGAGTGCCGAAGCTTGGAGTTTCTAGACTTGGGCTATAATCGGCTTCGGGTTCTAACTCGCACAGCATTCCTAGGTTTGTCTCGACTTATGGAACTCCACCTGGAACACAATCAGTTTTCACGAATCAACTTCTTTCTCTTTCCACGCCTTGCCAACCTT[C/T]GAGCCCTTTACCTACAGTGGAACCGTATTCGAGCTGTCAACCAAGGCCTTCCGTGGAGCTGGTATACCCTGCAGAGGCTTGACATCTCTGGCAATGAGATACAGGTACTAGATCCTGTAGTCTTTCAATGCCTTCCCAATCTTCAGGTTCTCAACTTGGAGTCTAACAAACTCGCCAATGTCTCTCAGGAAGTTGTGGCTGCCTGGATCTCACTAACAACTATTAGCCTTGCAGGCAATATGTGGGATTGTGGTCCGGGTATTTGTCCTCTTGTTGTCTGGCTCAAGAATTTCAGAGGCACCAAGGACACTAATATAATCTGCAGCAGTCCCAAACACCTTCAAGGGGAAAAAGTCATTGAGGCTTCAAAGAACTACATTGACTGTGATGATTATGAAATTACCGCTCAATCTCCTTTGTATCTGCAGACGTTTGATCCAAATTATGACCTTGCTCTTGAACCAACTGAACCAACAATGGCTCCTACCACACCGCCACCA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa21708
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000113737 Nonsense 357 571 2 3
ENSDART00000141364 Nonsense 357 456 2 2
Genomic Location (Zv9):
Chromosome 10 (position 19369713)
Other Location(s):
Assembly Chromosome Position
GRCz10 10 19382059
GRCz11 10 19339493
KASP Assay ID:
2260-3115.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CACCTTCAAGGGGAAAAAGTCATTGAGGCTTCAAAGAACTACATTGACTG[T/A]GATGATTATGAAATTACCGCTCAATCTCCTTTGTATCTGCAGACGTTTGA
Long Flanking Sequence:
CGGGTTCTAACTCGCACAGCATTCCTAGGTTTGTCTCGACTTATGGAACTCCACCTGGAACACAATCAGTTTTCACGAATCAACTTCTTTCTCTTTCCACGCCTTGCCAACCTTCGAGCCCTTTACCTACAGTGGAACCGTATTCGAGCTGTCAACCAAGGCCTTCCGTGGAGCTGGTATACCCTGCAGAGGCTTGACATCTCTGGCAATGAGATACAGGTACTAGATCCTGTAGTCTTTCAATGCCTTCCCAATCTTCAGGTTCTCAACTTGGAGTCTAACAAACTCGCCAATGTCTCTCAGGAAGTTGTGGCTGCCTGGATCTCACTAACAACTATTAGCCTTGCAGGCAATATGTGGGATTGTGGTCCGGGTATTTGTCCTCTTGTTGTCTGGCTCAAGAATTTCAGAGGCACCAAGGACACTAATATAATCTGCAGCAGTCCCAAACACCTTCAAGGGGAAAAAGTCATTGAGGCTTCAAAGAACTACATTGACTG[T/A]GATGATTATGAAATTACCGCTCAATCTCCTTTGTATCTGCAGACGTTTGATCCAAATTATGACCTTGCTCTTGAACCAACTGAACCAACAATGGCTCCTACCACACCGCCACCACCCCTGCCATCCCCCGCCTCAGAGGCACCTTTTCCTCCTCCCCAGCCTCGCCCACCTCATCGCCCCACCTTTCCCAGTCGTACAAACACAGATCCCAGAGACTCTCATCAACGGACACCTTCATCTTTTGACAGCTCATTAGTGACACCAGTTCCTGAGCAAGACAACGTGTCATTTCACAAAGTGGTTATGGGTGGTGTGGCACTATTCTTCTCAGTGTCCCTTGTTTTGTCAGTAATATATGTCTCCTGCAAACGTTACCCTGGCGCCACTCGGCTGTTGCAGCAGAGTTCAGTGGGCCGAAAGCGAAGGAAAAAAAGTCAGGAGCCAGAGCAGAACCTGAGCTCCCAGCTCCAGGAATATTACATGAGCTACAACCCCGCCGC
Associated Phenotype:
Not determined