ZMP
zgc:112257
Ensembl ID:
ZFIN ID:
Description:
hypothetical protein LOC553696 [Source:RefSeq peptide;Acc:NP_001018506]
Human Orthologues:
AC108938.4, LIMS1, LIMS3
Human Descriptions:
LIM and senescent cell antigen-like domains 1 [Source:HGNC Symbol;Acc:6616]
LIM and senescent cell antigen-like domains 3 [Source:HGNC Symbol;Acc:30047]
LIM and senescent cell antigen-like-containing domain protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9H
LIM and senescent cell antigen-like domains 3 [Source:HGNC Symbol;Acc:30047]
LIM and senescent cell antigen-like-containing domain protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9H
Mouse Orthologue:
Lims1
Mouse Description:
LIM and senescent cell antigen-like domains 1 Gene [Source:MGI Symbol;Acc:MGI:1195263]
Alleles
There are 2 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa44697 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa34535 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa44697
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000006099 | Nonsense | 257 | 377 | 6 | 11 |
ENSDART00000147882 | Nonsense | 213 | 333 | 5 | 10 |
Genomic Location (Zv9):
Chromosome 9 (position 426946)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 9 | 119278 |
GRCz11 | 9 | 97847 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTGCAGGAGACCAGTGGAGGGACGAGTGGTCAACGCCATGGGGAAACAGT[G/A]GCACGTGGAGGTACACACACACACACACACGCACACGCACGCACACACAG
Long Flanking Sequence:
CAGCCGTCAGAAGGCTCTCTCTCTGGGCAAACACGTCTGCCAGAAGTGCCTGTGTGTGGTGGAGGAGCCGCTGATGTACCGGAGCGACCCGTACCACCCCGACCACTTCAACTGCAGCCACTGCGGGTCTGTGTGTGTGTGTGTGTATTGGTGTATCGTGCTGCTGATCTCCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATTGGTGTATCGTGCTGCTGATCTCCTGTGTGTGTGTGTGTGTGTGTGTGTGTATTGGTGTATCGTGCTGCTGATCTCCTGTGTGTGTGTGTGTGTGTGTGTGTGTATTGGTGTATCGTGCTGCTGATCTCCTGTGTGTGTGTGTGTGTGCTCCTCCAGGAAGGAGCTGACAGCAGATGCGCGTGAGCTGAAGGGGGAGCTCTACTGTCTGCCCTGTCATGATAAGCTGGGCGTCCCCATCTGTGGAGCCTGCAGGAGACCAGTGGAGGGACGAGTGGTCAACGCCATGGGGAAACAGT[G/A]GCACGTGGAGGTACACACACACACACACACGCACACGCACGCACACACAGGACTGACTGACCCTTTATTCATCATTTAAGTGTGTGAAGCTGCTCTCTTTGTGTTTATGCATGCGTGTGTGTGTGTGTGTGTCTCTGTGTGTGTTTGCAGCACTTTGTGTGTGTAAAGTGTGAGAAGCCGTTCCTCGGCCATCGGCATTACGAGCGTAAGGGACTGGCGTACTGCGAGACTCACTATAACCAGGTATCAGAGCTCAGCTCATAACACACACACACACACACACACACACACACACACACACATTATAACACTGCAGTGACGGTGTGTGTGTGTGTTTCTGGTTCTCCACAGCTCTTCGGGGACGTCTGCTTTCAGTGTAACCGTGTGATCGAGGGTGACGGTGAGTTGCATTTACACTGAGTGTGTGTGTGTGTGTGTACCTGCTGACACTCAGACGCGTGCGTGTGTGTGTGTGTGTGTGTGTGTTTCAGTGGTGTCCG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa34535
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000006099 | Essential Splice Site | 307 | 377 | 8 | 11 |
ENSDART00000147882 | Essential Splice Site | 263 | 333 | 7 | 10 |
Genomic Location (Zv9):
Chromosome 9 (position 426545)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 9 | 118877 |
GRCz11 | 9 | 97446 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCTCTTCGGGGACGTCTGCTTTCAGTGTAACCGTGTGATCGAGGGTGACG[G/A]TGAGTTGCATTTACACTGAGTGTGTGTGTGTGTGTGTACCTGCTGACACT
Long Flanking Sequence:
TCTACTGTCTGCCCTGTCATGATAAGCTGGGCGTCCCCATCTGTGGAGCCTGCAGGAGACCAGTGGAGGGACGAGTGGTCAACGCCATGGGGAAACAGTGGCACGTGGAGGTACACACACACACACACACGCACACGCACGCACACACAGGACTGACTGACCCTTTATTCATCATTTAAGTGTGTGAAGCTGCTCTCTTTGTGTTTATGCATGCGTGTGTGTGTGTGTGTGTCTCTGTGTGTGTTTGCAGCACTTTGTGTGTGTAAAGTGTGAGAAGCCGTTCCTCGGCCATCGGCATTACGAGCGTAAGGGACTGGCGTACTGCGAGACTCACTATAACCAGGTATCAGAGCTCAGCTCATAACACACACACACACACACACACACACACACACACACACATTATAACACTGCAGTGACGGTGTGTGTGTGTGTTTCTGGTTCTCCACAGCTCTTCGGGGACGTCTGCTTTCAGTGTAACCGTGTGATCGAGGGTGACG[G/A]TGAGTTGCATTTACACTGAGTGTGTGTGTGTGTGTGTACCTGCTGACACTCAGACGCGTGCGTGTGTGTGTGTGTGTGTGTGTGTTTCAGTGGTGTCCGCGCTCAACAAGGCCTGGTGTGTCCGCTGCTTCAGCTGCTCCACCTGCACCTCCAGGCTCACACTCAAGTGCGTATCTGCCCTCACTAGTGCACTACACAGAGGAAACTACAGCTGCATCTGAAAGCACACACTTCTACACTATACAGTGGGACCGCCGAGCCTTGTGGTAGCCCACAGTGTTCTGTTGATCTGTGTGACGCCTCCTCATTAACACACACACACTGATAACGCTCGGATCAGACCTGAACCAGGCCAGAGCAGTTCCTGCCACACCAGCATCATCTCAAAGCCTGTCAAGCAGAATATGATGATGGACCGAGTCAAACGCAGCACTGAGGTCCAGTAACACTGACGGAAACGCAGGGCAGTGTAGTGTAGGGATGAGCTTATCATGCAGGCC
Associated Phenotype:
Not determined