ZMP
wnt5a
Ensembl ID:
ZFIN IDs:
Description:
protein Wnt-5a [Source:RefSeq peptide;Acc:NP_001073303]
Human Orthologues:
WNT5A, WNT5B
Human Descriptions:
wingless-type MMTV integration site family, member 5A [Source:HGNC Symbol;Acc:12784]
wingless-type MMTV integration site family, member 5B [Source:HGNC Symbol;Acc:16265]
wingless-type MMTV integration site family, member 5B [Source:HGNC Symbol;Acc:16265]
Mouse Orthologues:
Wnt5a, Wnt5b
Mouse Descriptions:
wingless-related MMTV integration site 5A Gene [Source:MGI Symbol;Acc:MGI:98958]
wingless-related MMTV integration site 5B Gene [Source:MGI Symbol;Acc:MGI:98959]
wingless-related MMTV integration site 5B Gene [Source:MGI Symbol;Acc:MGI:98959]
Alleles
There are 2 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa93 | Missense | Confirmed mutation in F2 line | Not yet available |
sa44695 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa93
Status:
Confirmed mutation in F2 line
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Missense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000023675 | Missense | 109 | 374 | 3 | 6 |
ENSDART00000123877 | Missense | 109 | 374 | 3 | 5 |
Genomic Location (Zv9):
Chromosome 8 (position 55922264)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 8 | 53845428 |
GRCz11 | 8 | 53675158 |
KASP Assay ID:
554-0068.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGACGGGCATCAGGGAGTGCCAGCACCAGTTCCGCCACCACCGCTGGAAC[T/A]GCAGCACCGTCGACAACTCCACAGTGCTGGGCAGAGTCATGCACATCGGT
Long Flanking Sequence:
GAATCGCCACAACAGATCAATTACTATAGTTGTTGTCACTATAGCAACTGTATAATCACCACAACAGATTAATGTATGTACCTAATTGTAGAATGGTTCAAAAACACTGCAGTATTTGCTATAAATTACTATAGTATTTTTTCATGTGGGCAAGTTCACTGTACATATTAGGTAAGTGAGCTTTATTTGCCAGATCTTTTGGGATCTTTTGGGTAGGGACAAAAGATATTCCACATATTTAGAAAAGTGTATATAGCAATTAACAAACCATGGAAGCCAATGTGTGAGTCTGTGTGTGCAGGTCTCTGGCGATGAATCCTCTGCTGATTCCTGAAGTGTATGTGATCGGTGGTCAGCCGCTGTGCAGTCAGTTATCTGGACTCTCCAAGGGCCAGAAGAAGCTCTGCCAGCTCTACCAGGACCACATGCAGTACATCGGAGAAGGGGCAAAGACGGGCATCAGGGAGTGCCAGCACCAGTTCCGCCACCACCGCTGGAAC[T/A]GCAGCACCGTCGACAACTCCACAGTGCTGGGCAGAGTCATGCACATCGGTATGTACGCCGCAAAAACACGTGCTGGATACGGAATACACTCATTCACTATTCCCTACTAGGCATGGGATAATAACGGCTCTCAAGGTGTACTGCAGTTTGAGAAAGTCAAGGTTTTAAACCTTTTTCGCTAAACAGAAATTGGGGGAAATTTATACAGGGGGGCTAAAAATTCTGACTTCAACTGTATATGTGCACTTGCCGGCCACTTTATTAAGCACACGTTACTAGTACTGGGTTGGACCCCTTTTTCCTTCAGAACTGCCTTATTCCCCTTCATGTTGTAGATTTAACAAGCTACTGGAAATATTCCTCAGAGATTTTGCTCCATATTGTCATGATAGCATCACACAGTCGCTGCAGATTTGTCGGCTGCACATCCATGATGCCAATCTCCCGTTCCACCACATCCCAAAGCTGCTCTATTGGATTGAGCTCTGGTGACCGTGGAG
Associated Phenotype:
Normal
Stage | Entity | Quality | Tag |
---|---|---|---|
Larval:Day 5 ZFS:0000037 |
whole organism ZFA:0001094 |
quality PATO:0000001 |
normal PATO:0000461 |
Mutation Details
Allele Name:
sa44695
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000023675 | Nonsense | 196 | 374 | 4 | 6 |
ENSDART00000123877 | Nonsense | 196 | 374 | 4 | 5 |
Genomic Location (Zv9):
Chromosome 8 (position 55924008)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 8 | 53843684 |
GRCz11 | 8 | 53673414 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACCTCAACTACGGCTACCGCTTCAGCAGAGAGTTCGTGGATGCCCGCGAG[C/T]GAGAGAAAACGTTCAGCAAGGGCTCCGCGGAGAGCGCCCGGCAGATGATG
Long Flanking Sequence:
TTGCAGCAACAACCATGCCACGTTCAAAGTCACTTAAATCCCCTTTCTTCCCCATTCTGATGCTCGCTGTGAACTGCAGCAGATCCTCTTGACCATGTGTACATGCCCAAATGCAGTGAGCTGCTGCCATGTGATTGGCTGATTAGACTTTTTTTTTTAACGAGCACTTGGACAGGTGTACCTAATAAAGTGGCCGCTAAGTGTGTGTGTATATATATATATATATATATATATATGTGTGTGTGTGGGCTGCTCAGCTAATGCTCCTGTTGTTTTTCCTCTTGTCAGGCAGCAGAGAGTCAGCATTCGCCTTCGCCATCAGTGCAGCAGGAGTCCTGCATGCAGTGAGCCGTGCCTGCAGAGAGGGGGCGCTGTCCAGCTGTGGCTGCAGCAGAGCCTCCAGACCCAAAGACCTGCCTCGTGACTGGCTATGGGGCGGCTGCGGAGACAACCTCAACTACGGCTACCGCTTCAGCAGAGAGTTCGTGGATGCCCGCGAG[C/T]GAGAGAAAACGTTCAGCAAGGGCTCCGCGGAGAGCGCCCGGCAGATGATGAACCTGCATAACAACGAGGCCGGACGCAGGGTGAGGAGTGTGGGTGTAGTTGTAAACCTAGCTGCATGCAGTTATTTAATGCGCACACCTAACCCCACGTATGAAAGTGAAGAGTGGGGCCGGGGGGTAGGGGGATCGTGGACGAAAGTGAAGAGGGTTGGGAAGTCGTGGATAAAAGTGAAGAGCGGGGAGTGGCGGGTGTGAGGAGGAGGAGCAGTAAAATGAGGTGCCGGAACAGGTTTTAGAGGTGCCGGATCCGGATTGTTATGTCACAAATTAAGCCCTGACTAGGCCAATTTAGTTCATCAATTCCCCTATAGCGCATGTGTTTGGACTGTGGGGGAAAACAGAGCACCTGGAGGAAACCCAGGCCAACACGAAGAGAACATGCAAACTCCACACAGAAACACCAACTGACCCAGCCGGGACTCAGCAAGTTTCTAACTCAGT
Associated Phenotype:
Not determined