ZMP
si:dkey-267i17.6
Ensembl ID:
ZFIN ID:
Description:
Novel protein similar to vertebrate transmembrane channel-like 2 (TMC2) [Source:UniProtKB/TrEMBL;Acc
Human Orthologue:
TMC2
Human Description:
transmembrane channel-like 2 [Source:HGNC Symbol;Acc:16527]
Mouse Orthologue:
Tmc2
Mouse Description:
transmembrane channel-like gene family 2 Gene [Source:MGI Symbol;Acc:MGI:2151017]
Alleles
There is 1 allele of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa11141 | Essential Splice Site | Available for shipment | Available now |
Mutation Details
Allele Name:
sa11141
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000073638 | Essential Splice Site | 388 | 430 | 9 | 9 |
| ENSDART00000144087 | Essential Splice Site | 583 | 761 | 14 | 17 |
Genomic Location (Zv9):
Chromosome 5 (position 55840195)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 5 | 54624865 |
| GRCz11 | 5 | 55247701 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ATAACTTATMTTATGAACATTTATTCATAACTGTTCATYCTGTTACTGTA[G/A]TGGAAAGGAAAGAATGTTYGACGTTGTTATGGAGACCATTGATCTGGATC
Long Flanking Sequence:
CCATATTGGGTGAACTAACCCTTTAATGTGATAAGAACCATTTAGGTGTACTTAAATGAATGTGCATCCATGGCTCATTTTTGTCCTCATATGTACACTTTTAAAATGTAACCAAACAAGAATAAGCTACCTAACACTTCTTTACCTGAATATTTATAAAGCTGTTTTCTGTGTTTGTCAGGATGGGGGCATTCTATGCTCCCGGTCTTGTAGGCATCAATGTTCTGCGGCTCCTTTCATCTATGTACTATCAATGCTGGGCTGTAATGGCCTGTAATGTCCCACATGAGAGGGTCTTTAAAGCTTCTAAATCCAATAACTTCTACATGGGCCTGTTATTGCTCATCCTCTTTCTGAGTCTCCTACCTGTGGTTTACACCATTATGTCTTTGCCACCATCTTTTGATTGTGGACCTTTCAGGTACTAAAAGCATACTATAATAGCCCAAAATAACTTATATTATGAACATTTATTCATAACTGTTCATCCTGTTACTGTA[G/A]TGGAAAGGAAAGAATGTTCGACGTTGTTATGGAGACCATTGATCTGGATCTACCAGCATTTATGGGGACTCTCTTTGGATATGTCGCAAACCCGGGACTCGTTATATCTGCAGTACTTCTCATGGTGTAAGTGAATTATTTAAAATGGCATGATCACATACTGCAGGTAGGGATGAGTGGGTAGCACTGACATTTTTTTTTTTTTTTTGCAGCAACTAAGTTCCCTAGTTCAAATCCTGATTGTGCCAGAACATATTTCTTTATGGGGTTTCATGTATTTGATCACATGTTAATATCACATACAAAATAAGTGAAATTTGCAGTTTTTAAACATTCTATTGTAAAGCTTTTATTTCCCCTTTTTTGCACATGCTTTTTTCATATTTGATCATATGGGTTTCACTTGAAATGTTCAAAACAACATTTCACATGCTCAACAGGTATCACATTGGATTTGTAACATGAAGCTATGTTATAAAGCATGTATCTAAGTTACTAGA
Associated Phenotype:
Not determined