ZMP
smg1
Ensembl ID:
ZFIN ID:
Description:
serine/threonine-protein kinase SMG1 [Source:RefSeq peptide;Acc:NP_001073513]
Human Orthologues:
AC009060.1, AC009086.1, AC009086.2, SMG1
Human Descriptions:
Putative uncharacterized SMG1-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q6P435]
SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans) [Source:HGNC Symbol;Acc:3004
Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:A6NN41]
SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans) [Source:HGNC Symbol;Acc:3004
Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:A6NN41]
Mouse Orthologue:
Smg1
Mouse Description:
SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans) Gene [Source:MGI Symbol;Acc:
Alleles
There are 13 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa14826 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa15112 | Nonsense | Available for shipment | Available now |
sa17501 | Essential Splice Site | Available for shipment | Available now |
sa20041 | Nonsense | Available for shipment | Available now |
sa20040 | Essential Splice Site | Available for shipment | Available now |
sa1093 | Nonsense | F2 line generated | Not yet available |
sa33204 | Essential Splice Site | Available for shipment | Available now |
sa44562 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa20039 | Nonsense | Available for shipment | Available now |
sa12615 | Nonsense | Available for shipment | Available now |
sa26086 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa40090 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa33203 | Essential Splice Site | Available for shipment | Available now |
Mutation Details
Allele Name:
sa14826
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000076764 | Nonsense | 81 | 3635 | 3 | 62 |
ENSDART00000076796 | Nonsense | 81 | 3640 | 3 | 62 |
ENSDART00000076764 | Nonsense | 81 | 3635 | 3 | 62 |
ENSDART00000076796 | Nonsense | 81 | 3640 | 3 | 62 |
Genomic Location (Zv9):
Chromosome 3 (position 31305687)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 3 | 31023726 |
GRCz11 | 3 | 31154568 |
KASP Assay ID:
1641-0502.1 (used for ordering genotyping assays)
KASP Sequence:
TTTTCTTTTATTGAAGGGAACTGACAATATTCCTGCTTTGTAGGTGGATA[C/A]GACGCTGATGGAGGCCTCTCTGAAAATGCTTATGGTTGGAAGTCGCTGGG
Long Flanking Sequence:
AAATCACCAGGTGCTTTTCTTCCTTTTTTGGAAGGTCCCAGAGTTTCCCTGTGTGAATTAGACTATGTTTACTTTTAATTTTGTTTATTGAAGATGTTTAATTTAATAAATATTTGATCATTTTCTTGTTTTTGTTTATTTTTTATGGCTGGCCATAAACATATACAGATATTTTAAAAAAATTATATTATTTTTTAATATAGTTGATTATTTTTTAGTTATATAAATAACCAAGTTATTGTATAATCATCATTTTAATTTACAATAAATCATTCATAATAATATAATTCATTATAAATCATGAAATAATTCATACTGTAAAAAGAGTTTGTTCAAGGTTCATCTTTAGATTAGACAACATACATTTCCTGTTCTCTTGCTTATTATGCATAGAGCTTTGCTGCTGGCACAACAGAGCGAACAGAAAACTAACTAACTTCAAACAAATGTTTTTCTTTTATTGAAGGGAACTGACAATATTCCTGCTTTGTAGGTGGATA[C/A]GACGCTGATGGAGGCCTCTCTGAAAATGCTTATGGTTGGAAGTCGCTGGGGCAAGAGTTGAGAATTAATGATGTGACTACTGATATAACCACTTTTCAGCATGGAAACCGTGCTTTAGCTACAAAGGACATGAGGAAATCACAGGGTATGTTCACCTCACAGGACCTCATGCATTGCTTGCTGTGAAAGAATTGGCTTAACTTGAGTAGATAAATTCATTTATTCATTAGCTTCTTCACATTCTCTGTTATTTCTCAGACCGACCGTTGGCTCACTCTGAGGAGTCTCGTCTGGCCAATCTTCTGCGGAGAGCATCACGGGAAGATGACCGGGAACGCAGACTGGCCACTATGAAACAAATGAAGGAGTTCATTGTGCACTCTGAAAATAAAGTGGTATGAACTGACACGCACAAATGGGTTCTGATGTAAAGTGTTTATTTAACAGTTTTTTTTTTTTTTAATGAGTGTTTTTTGCTTTACAGGTCCTAGTGAAACAGT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa15112
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000076764 | Nonsense | 81 | 3635 | 3 | 62 |
ENSDART00000076796 | Nonsense | 81 | 3640 | 3 | 62 |
ENSDART00000076764 | Nonsense | 81 | 3635 | 3 | 62 |
ENSDART00000076796 | Nonsense | 81 | 3640 | 3 | 62 |
Genomic Location (Zv9):
Chromosome 3 (position 31305687)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 3 | 31023726 |
GRCz11 | 3 | 31154568 |
KASP Assay ID:
1641-0502.1 (used for ordering genotyping assays)
KASP Sequence:
TTTTCTTTTATTGAAGGGAACTGACAATATTCCTGCTTTGTAGGTGGATA[C/A]GACGCTGATGGAGGCCTCTCTGAAAATGCTTATGGTTGGAAGTCGCTGGG
Long Flanking Sequence:
AAATCACCAGGTGCTTTTCTTCCTTTTTTGGAAGGTCCCAGAGTTTCCCTGTGTGAATTAGACTATGTTTACTTTTAATTTTGTTTATTGAAGATGTTTAATTTAATAAATATTTGATCATTTTCTTGTTTTTGTTTATTTTTTATGGCTGGCCATAAACATATACAGATATTTTAAAAAAATTATATTATTTTTTAATATAGTTGATTATTTTTTAGTTATATAAATAACCAAGTTATTGTATAATCATCATTTTAATTTACAATAAATCATTCATAATAATATAATTCATTATAAATCATGAAATAATTCATACTGTAAAAAGAGTTTGTTCAAGGTTCATCTTTAGATTAGACAACATACATTTCCTGTTCTCTTGCTTATTATGCATAGAGCTTTGCTGCTGGCACAACAGAGCGAACAGAAAACTAACTAACTTCAAACAAATGTTTTTCTTTTATTGAAGGGAACTGACAATATTCCTGCTTTGTAGGTGGATA[C/A]GACGCTGATGGAGGCCTCTCTGAAAATGCTTATGGTTGGAAGTCGCTGGGGCAAGAGTTGAGAATTAATGATGTGACTACTGATATAACCACTTTTCAGCATGGAAACCGTGCTTTAGCTACAAAGGACATGAGGAAATCACAGGGTATGTTCACCTCACAGGACCTCATGCATTGCTTGCTGTGAAAGAATTGGCTTAACTTGAGTAGATAAATTCATTTATTCATTAGCTTCTTCACATTCTCTGTTATTTCTCAGACCGACCGTTGGCTCACTCTGAGGAGTCTCGTCTGGCCAATCTTCTGCGGAGAGCATCACGGGAAGATGACCGGGAACGCAGACTGGCCACTATGAAACAAATGAAGGAGTTCATTGTGCACTCTGAAAATAAAGTGGTATGAACTGACACGCACAAATGGGTTCTGATGTAAAGTGTTTATTTAACAGTTTTTTTTTTTTTTAATGAGTGTTTTTTGCTTTACAGGTCCTAGTGAAACAGT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa17501
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000076764 | Essential Splice Site | 130 | 3635 | 3 | 62 |
ENSDART00000076796 | Essential Splice Site | 130 | 3640 | 3 | 62 |
Genomic Location (Zv9):
Chromosome 3 (position 31305540)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 3 | 31023579 |
GRCz11 | 3 | 31154421 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CAGCATGGAAACCGTGCTTTAGCTACAAAGGACATGAGGAAATCACAGGG[T/A]ATGTTCACCTCACAGGACCTCATGCATTGCTTGCTGTGAAAGAATTGGCT
Long Flanking Sequence:
GCTGGCCATAAACATATACAGATATTTTAAAAAAATTATATTATTTTTTAATATAGTTGATTATTTTTTAGTTATATAAATAACCAAGTTATTGTATAATCATCATTTTAATTTACAATAAATCATTCATAATAATATAATTCATTATAAATCATGAAATAATTCATACTGTAAAAAGAGTTTGTTCAAGGTTCATCTTTAGATTAGACAACATACATTTCCTGTTCTCTTGCTTATTATGCATAGAGCTTTGCTGCTGGCACAACAGAGCGAACAGAAAACTAACTAACTTCAAACAAATGTTTTTCTTTTATTGAAGGGAACTGACAATATTCCTGCTTTGTAGGTGGATACGACGCTGATGGAGGCCTCTCTGAAAATGCTTATGGTTGGAAGTCGCTGGGGCAAGAGTTGAGAATTAATGATGTGACTACTGATATAACCACTTTTCAGCATGGAAACCGTGCTTTAGCTACAAAGGACATGAGGAAATCACAGGG[T/A]ATGTTCACCTCACAGGACCTCATGCATTGCTTGCTGTGAAAGAATTGGCTTAACTTGAGTAGATAAATTCATTTATTCATTAGCTTCTTCACATTCTCTGTTATTTCTCAGACCGACCGTTGGCTCACTCTGAGGAGTCTCGTCTGGCCAATCTTCTGCGGAGAGCATCACGGGAAGATGACCGGGAACGCAGACTGGCCACTATGAAACAAATGAAGGAGTTCATTGTGCACTCTGAAAATAAAGTGGTATGAACTGACACGCACAAATGGGTTCTGATGTAAAGTGTTTATTTAACAGTTTTTTTTTTTTTTAATGAGTGTTTTTTGCTTTACAGGTCCTAGTGAAACAGTTGGATTCCATTTTGAGCACCCTGAATGACATTTTGAATGAGAGGTAAGTCTGCGCAGCCTATTTTTAACAATGAGGGTTATCAGAATTCACTCTCATGGGATTATATTTAGCACTTCATTGTTTGTGAAGTGTTGTGATCAGTCTGG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa20041
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000076764 | Nonsense | 181 | 3635 | 5 | 62 |
ENSDART00000076796 | Nonsense | 181 | 3640 | 5 | 62 |
Genomic Location (Zv9):
Chromosome 3 (position 31305186)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 3 | 31023225 |
GRCz11 | 3 | 31154067 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTTTTTTTTTTAATGAGTGTTTTTTGCTTTACAGGTCCTAGTGAAACAGT[T/A]GGATTCCATTTTGAGCACCCTGAATGACATTTTGAATGAGAGGTAAGTCT
Long Flanking Sequence:
GACGCTGATGGAGGCCTCTCTGAAAATGCTTATGGTTGGAAGTCGCTGGGGCAAGAGTTGAGAATTAATGATGTGACTACTGATATAACCACTTTTCAGCATGGAAACCGTGCTTTAGCTACAAAGGACATGAGGAAATCACAGGGTATGTTCACCTCACAGGACCTCATGCATTGCTTGCTGTGAAAGAATTGGCTTAACTTGAGTAGATAAATTCATTTATTCATTAGCTTCTTCACATTCTCTGTTATTTCTCAGACCGACCGTTGGCTCACTCTGAGGAGTCTCGTCTGGCCAATCTTCTGCGGAGAGCATCACGGGAAGATGACCGGGAACGCAGACTGGCCACTATGAAACAAATGAAGGAGTTCATTGTGCACTCTGAAAATAAAGTGGTATGAACTGACACGCACAAATGGGTTCTGATGTAAAGTGTTTATTTAACAGTTTTTTTTTTTTTTAATGAGTGTTTTTTGCTTTACAGGTCCTAGTGAAACAGT[T/A]GGATTCCATTTTGAGCACCCTGAATGACATTTTGAATGAGAGGTAAGTCTGCGCAGCCTATTTTTAACAATGAGGGTTATCAGAATTCACTCTCATGGGATTATATTTAGCACTTCATTGTTTGTGAAGTGTTGTGATCAGTCTGGTGAATCCTAGTCATAAACTGTTTATCTGGCCGTGATGACATGGCTCTTTGGAAAGTTTTATTGCCTAATCAACTGAAGGACTGAAACTACGGCTATTTAAATCAGAATTAATTATTATGAAGGTCATGTCACATACTAGAGAGCATTTTATTGGTCAAAAAATTGTCGTATGAGGTGATGTTAAAAAATCGTTCATAGGTTTAGGAGGAAGTGACTAACTGCAAGCTTTTGGATATCAGTTTTCTATTTTCTAAATGTAAATATTGTCAATGTTTTGGAGCACACTAGCTAATAGATATTCTTAAAACTAATATTACTTTTTTATTTTAACTTCACAGGACCTTCAAAAAATAC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa20040
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > T
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000076764 | Essential Splice Site | 665 | 3635 | 14 | 62 |
ENSDART00000076796 | Essential Splice Site | 665 | 3640 | 14 | 62 |
Genomic Location (Zv9):
Chromosome 3 (position 31300780)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 3 | 31018819 |
GRCz11 | 3 | 31149661 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCTGCTGTCCAGTATGCAGTGCTCTACACTCTCTACTCTCACTGCACCAG[G/T]TAACAAACCAATGGTTTCATCTAAATAATGCATTCTGAAAAATCTGTTTT
Long Flanking Sequence:
AGGCGGCATATAAACTGGTCTTGGGCGAGATGGGCTGTGCACTGAACAGTTTGCTGAGCCCTCTGGGTTTGCCTGATGCCTGTCCTCACATCCAACATCCTGCTTTCAGCCAGCTGAACTTTAGCCCAGAGAGAGCTGAGTTTGTCCTCATCTTTAACCTCAGTGCTCTCACCACCATTGGCAACACCAAGAACTCCCTCATCGGGGTCAGCATTAATTCATACCCTGAAATTTTGTTAGTCTGTAATTTTAACATCTTACTTATCAGTTCTGTGAAAAGGGTTCTTTTATGCTAGGAAAATGTATGTAAACGAGGAAAAATAGCACTGAAACTCATCTGTCGTGTGTGTGTGTGTGTGTGTGTTACAGATGTGGGCTCTGTCTCCTACTGTGTTTGCCCTGCTCAGTCAGAATCTGGTTATTGTTCATTCTGATTTGGCAGTTCATCATCCTGCTGTCCAGTATGCAGTGCTCTACACTCTCTACTCTCACTGCACCAG[G/T]TAACAAACCAATGGTTTCATCTAAATAATGCATTCTGAAAAATCTGTTTTTCAGGGCATGAGAAGTCATGTGTGTTTGCATGCTAATTTATATTATGTACTTATACTTTACTCTTCAAATGATTGACGTCGGTAAGATTTTAATAATTAAAAAAAAAATTTAAAAGGATTTATTAACAATTGTAGGGCTGCTCTGATTTGAATTGTATTGCTTAGAACATAACTGTGCCTCTTGCGATCTCTTCTCTTGCTTAATCACACTCTTCCTCTGCTTATAAACTCCTAAATAAACACCTGCGATCGCTTCATGAGATTGACCAGATTGGCGAGTACCGATTGAGTCATGAAATGTGATAATCGCCTGATACCAATCTCCAGCCGATCGATCGGAGCATTCCTAAAAATAGTTTTCAATATCAAAATTTCCAATTTCTTACCTAAGTGGTTCCAAAACATTTGTTTTTTTCTTCTGTTGAACACAAAAGATATTCTGAAGAGAGT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa1093
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000076764 | Nonsense | 760 | 3635 | 17 | 62 |
ENSDART00000076796 | Nonsense | 760 | 3640 | 17 | 62 |
Genomic Location (Zv9):
Chromosome 3 (position 31297837)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 3 | 31015876 |
GRCz11 | 3 | 31146718 |
KASP Assay ID:
554-0995.1 (used for ordering genotyping assays)
KASP Sequence:
CACCCAAGGGAATGAACTAAAATATGTGTTGTCTTTCCTCTGTTCAGCCT[T/A]GAATGAGGACACCACCATATGTCTGCAGGCATGTAACAGTCTACAGGTGC
Long Flanking Sequence:
ACTGGTTTCTAACCACGTTTGATGCCATTTGAGAGCTGCTTGATGCATTTAATATAATAAAACCTGTTTATTGTCACAGATATGATAAACTGATGTTTTTCTATTTGTACTTTCAGGTTTATTGATATTTTTTTAATGATGCCATGATGCCAGACTTCTCTGTTTGTTTTATTTGTTTTGATTTGCATTATATATTATTTATTGTGATAGGCGGCTGTTACTCACCTGGTCATTGGAAGTAGCTCTGATGATGAAGAAATCTGAAACTTACGCTCCTCTCTTCTCGCTCCCATCCTTCCTCAAATTCTGCAAAGGGTTACTGGCAAATTGTGAGTTCATACCTATAACTAATTTAGATACTAGAAGGCAGAGCTGTGTTATGAATGCTAAATAATGCTCCACCTCACTAGGGGGTTAAGCAAATAATAGCTTGTCGTAATAATAAACTGGCACCCAAGGGAATGAACTAAAATATGTGTTGTCTTTCCTCTGTTCAGCCT[T/A]GAATGAGGACACCACCATATGTCTGCAGGCATGTAACAGTCTACAGGTGCTGTCATCTTCCTTGACTATGGAGCTTCTCCAGAGGTAATCACACACATTCTCTGCTTGTTATATACCATCTCCCTGCAGATACAGTCATTAGAGTTGCAGCTTTTCCTCCTGCTCTTGTGGGTGGGGGTAAGAAAAAAAAAAACGCACAATGATCAGCACTGGTCTTCTCTCTGTGCAGGTGTGTGGACGTGTGCCGAGTTCAGCTGGTTCACTCAGCAGTCCGAGTCCGGCAGGCCTTTGGGAAATTGCTGAGATCTGTTCCCATGCACGTCGCACTGAGGTTTGCCAGACTCCTCTTCATCTGTCTTAAATCTGCACAATAGAAATCAAGGGGGTGGAGAAATACAACCTACTTTGTGGTTCTACCTCTGGCTGTAGTTGATATGATGGTAATTGTCGGCTTGTCTCCCAGCAGCGCCCATAGTCACTCTGAGATTAAGGAGATTTCT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa33204
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000076764 | Essential Splice Site | 822 | 3635 | 18 | 62 |
ENSDART00000076796 | Essential Splice Site | 822 | 3640 | 18 | 62 |
Genomic Location (Zv9):
Chromosome 3 (position 31297505)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 3 | 31015544 |
GRCz11 | 3 | 31146386 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CAGGCCTTTGGGAAATTGCTGAGATCTGTTCCCATGCACGTCGCACTGAG[G/A]TTTGCCAGACTCCTCTTCATCTGTCTTAAATCTGCACAATAGAAATCAAG
Long Flanking Sequence:
AGTTCATACCTATAACTAATTTAGATACTAGAAGGCAGAGCTGTGTTATGAATGCTAAATAATGCTCCACCTCACTAGGGGGTTAAGCAAATAATAGCTTGTCGTAATAATAAACTGGCACCCAAGGGAATGAACTAAAATATGTGTTGTCTTTCCTCTGTTCAGCCTTGAATGAGGACACCACCATATGTCTGCAGGCATGTAACAGTCTACAGGTGCTGTCATCTTCCTTGACTATGGAGCTTCTCCAGAGGTAATCACACACATTCTCTGCTTGTTATATACCATCTCCCTGCAGATACAGTCATTAGAGTTGCAGCTTTTCCTCCTGCTCTTGTGGGTGGGGGTAAGAAAAAAAAAAACGCACAATGATCAGCACTGGTCTTCTCTCTGTGCAGGTGTGTGGACGTGTGCCGAGTTCAGCTGGTTCACTCAGCAGTCCGAGTCCGGCAGGCCTTTGGGAAATTGCTGAGATCTGTTCCCATGCACGTCGCACTGAG[G/A]TTTGCCAGACTCCTCTTCATCTGTCTTAAATCTGCACAATAGAAATCAAGGGGGTGGAGAAATACAACCTACTTTGTGGTTCTACCTCTGGCTGTAGTTGATATGATGGTAATTGTCGGCTTGTCTCCCAGCAGCGCCCATAGTCACTCTGAGATTAAGGAGATTTCTCTGGCCATCCGCCGACACATGAGCAAAGTGCCTAGCAACACATTCCACCCACAGGACTTCTCTGACCTTATTGGGTTTATTCTGTACGGAACGGTCCATCGTGGGGGGTGAGTAGGCGGCCCGTTGACAGCGTACTGTCATTCATTTTAGAGATTTCATTCATTTATTTTCACCTTGCCTATGGAATGCATTTAAATTTTGTTAATGGACACAATTAAAACATGTGCCATAGATGATTTGTAGCTACAAAAAGGGCTTTTCTAAATTGATTAATGGATATTCAATGTTTTACATGATGTAGGAAGGAGCCCTGGTTGGAGCGTCTGTATCAC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa44562
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000076764 | Nonsense | 1577 | 3635 | 32 | 62 |
ENSDART00000076796 | Nonsense | 1582 | 3640 | 32 | 62 |
Genomic Location (Zv9):
Chromosome 3 (position 31291072)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 3 | 31009111 |
GRCz11 | 3 | 31139953 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTTTGCCTACAGTTAGCGTTGGTGTCGGGGAGCCAGACTTTGTCCTTGGG[C/T]AACTTTACCAGCTCTCAACTACTCAGGCTCCTGAAGTGGCCAAATCTTGG
Long Flanking Sequence:
GAATCTCAGCAATTCCTTATGTCGTCTTTCAGGTCAGTCTGTGTCTGCTATGGAGATGTTGAGCTCCTGTGCACTGTCATACTGTCACTCTGGGAAGTGCGAACTTGCGGCCTGTCGCTCGGTGCTCACTCTGTGCAAATGGCTTTTGGCTGACTGGAAAGATCTGACTCCCCAGCTGAAGATGGTGGTGAAGAAGAACTCTGGGTCTACCAGCCTCTCAACTCTCTCCAAAAACATCTCTGGCTTGTTGGAGCTGCCGCTGGAAGATCAGGGAATGCCACACATTACAACAGAGACTACAGGTATAACAGACCTTAAAAATGTGCAATATGTTAGGCCAGTTCATTAAATCATGTTTTTGGTATCATGAAGGGACCAGTATGACCGCATATAGCAGCTCATTTCATACTGTCACATGTTGTGTAGAATTGCATTTGATAATGAAGGATTGTTTGCCTACAGTTAGCGTTGGTGTCGGGGAGCCAGACTTTGTCCTTGGG[C/T]AACTTTACCAGCTCTCAACTACTCAGGCTCCTGAAGTGGCCAAATCTTGGGCTGCTCTTGCCAGCTGGGCCTACAGATGGGGCAGGAAGGTTGTGGACAATGCCAGGTATTTTAAACTGCAAGAAGTGTTAATGCAAGTAAAAAAAAAAATATTGTGCTCATACTGATGGATTTCCTTTTTTATTCTGTATGTTAATAGTCAAGGAGAAGGGGTTCCTCTGCTCCTCGGAGAGAAGAAAGAAATAGAGGAGTTGCTCCCAGCAGGCACCAGCGATGAGGACAAGGAAACCATTTTTGGCATTTTGGGTCAAGCCATGTGTCGCCCAGCAGGAATTCAGGTTATGAAGTTCACAGTTTTTATATACAGTCGCTATGAGACTAGATTACAGGTTTTTATACTGGAGGTAAAGTAAACACTTTTGAACCATGGAAATGTAATACTGTAAACCAGATTGTTTTTTTTTAAAGCAAACTATTAGTATCATTTAGATTTCTTTATA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa20039
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000076764 | Nonsense | 1681 | 3635 | 34 | 62 |
ENSDART00000076796 | Nonsense | 1686 | 3640 | 34 | 62 |
Genomic Location (Zv9):
Chromosome 3 (position 31289735)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 3 | 31007774 |
GRCz11 | 3 | 31138616 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGCAGAATGAAGAAGATGATGAGGACGACATGGTAGATGTAATTGGCCGA[C/T]AGCTGTTGGGTGCCTGTCCCTGGCTTTCAGATGTAGAGGACACTGTGACC
Long Flanking Sequence:
ACTTATCCACACATATTAATCGGAAGGAGAAGAGAAACCTATTTTGGACTCTTGTAAGAATTTTTTGAGGATTTTAATCGAATCTATGTTTTTATATTATATTAGATAATTTTATTTAATAAATATTCTAAGGGAAATGTTTAAGACGGTGTCTTCTGGAAATTGAATACCAATGAATTTTGATTGGTATTGTTGGTACCTGTTCAATCATTCATTTTCTTTTCAGCGTCTGTTGAATGTTTGCAAACGCGTGTTTGCTATGATTGTAAATTATGTTTGGAATATGTATTATCAGTTACCATGAGTATAGCCAATGGTGCTAATATGGCATTATAACCTAAATGCCTACATATCTTTATAGATCACAACTAAACAACAATTGTGGACCAAACAGGTTTGGTACAGTGTGTTCATGTGTCATTGTGCTATTGTAGGATGAGGATATGGCTCTGCAGAATGAAGAAGATGATGAGGACGACATGGTAGATGTAATTGGCCGA[C/T]AGCTGTTGGGTGCCTGTCCCTGGCTTTCAGATGTAGAGGACACTGTGACCGATGGACTCATTGGGGTGTGGAGGAGAGTGGTTGATCGGATCTTCAGCCTCTACCGGGTCTCCTGCAGGGCTTACTTCACTTTCCTCAAACTCAATGCTGGACAGGTCAGTGGTTACCTCATTGAATAATTATTCAACAGATTTCTAAACTATAAATCGATCATGAATTTATTGATGCTTCAATTATTAGGTGCCTATAGATGAAGATGATCCCAAGCTGCTCCTGAACAACCAGAACAGCAAGCAGAGCAGCGATGATGTCATTGTCATGGCAACCCTCCGTCTGCTGCGCTTGTTGGTGAAGCACGCAGGAGAGTTGAGGGAAGGTCTGGAGCACGGTTTGGCATCCACACCTACTGCTCCCTGGAGAGGTAAGAACATTGATATTCATAAGGGTTATAAGCACTTTCCTTTGTGGACATTGTAAACATTATTTACGTCAGTATTCAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa12615
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000076764 | Nonsense | 1686 | 3635 | 34 | 62 |
ENSDART00000076796 | Nonsense | 1691 | 3640 | 34 | 62 |
Genomic Location (Zv9):
Chromosome 3 (position 31289718)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 3 | 31007757 |
GRCz11 | 3 | 31138599 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GATGAGGACGACATGGTAGATGTAATTGGCCGACAGCTGTTGGGTGCCTG[T/A]CCCTGGCTTTCAGRTGTAGAGGACACTGTGACCGATGGACTCATTGGGGT
Long Flanking Sequence:
AATCGGAAGGAGAAGAGAAACCTATTTTGGACTCTTGTAAGAATTTTTTGAGGATTTTAATCGAATCTATGTTTTTATATTATATTAGATAATTTTATTTAATAAATATTCTAAGGGAAATGTTTAAGACGGTGTCTTCTGGAAATTGAATACCAATGAATTTTGATTGGTATTGTTGGTACCTGTTCAATCATTCATTTTCTTTTCAGCGTCTGTTGAATGTTTGCAAACGCGTGTTTGCTATGATTGTAAATTATGTTTGGAATATGTATTATCAGTTACCATGAGTATAGCCAATGGTGCTAATATGGCATTATAACCTAAATGCCTACATATCTTTATAGATCACAACTAAACAACAATTGTGGACCAAACAGGTTTGGTACAGTGTGTTCATGTGTCATTGTGCTATTGTAGGATGAGGATATGGCTCTGCAGAATGAAGAAGATGATGAGGACGACATGGTAGATGTAATTGGCCGACAGCTGTTGGGTGCCTG[T/A]CCCTGGCTTTCAGATGTAGAGGACACTGTGACCGATGGACTCATTGGGGTGTGGAGGAGAGTGGTTGATCGGATCTTCAGCCTCTACCGGGTCTCCTGCAGGGCTTACTTCACTTTCCTCAAACTCAATGCTGGACAGGTCAGTGGTTACCTCATTGAATAATTATTCAACAGATTTCTAAACTATAAATCGATCATGAATTTATTGATGCTTCAATTATTAGGTGCCTATAGATGAAGATGATCCCAAGCTGCTCCTGAACAACCAGAACAGCAAGCAGAGCAGCGATGATGTCATTGTCATGGCAACCCTCCGTCTGCTGCGCTTGTTGGTGAAGCACGCAGGAGAGTTGAGGGAAGGTCTGGAGCACGGTTTGGCATCCACACCTACTGCTCCCTGGAGAGGTAAGAACATTGATATTCATAAGGGTTATAAGCACTTTCCTTTGTGGACATTGTAAACATTATTTACGTCAGTATTCAATGGAATTATTGTATACA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa26086
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000076764 | Nonsense | 1737 | 3635 | 35 | 62 |
ENSDART00000076796 | Nonsense | 1742 | 3640 | 35 | 62 |
Genomic Location (Zv9):
Chromosome 3 (position 31289482)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 3 | 31007521 |
GRCz11 | 3 | 31138363 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TAAATCGATCATGAATTTATTGATGCTTCAATTATTAGGTGCCTATAGAT[G/T]AAGATGATCCCAAGCTGCTCCTGAACAACCAGAACAGCAAGCAGAGCAGC
Long Flanking Sequence:
TTTGCTATGATTGTAAATTATGTTTGGAATATGTATTATCAGTTACCATGAGTATAGCCAATGGTGCTAATATGGCATTATAACCTAAATGCCTACATATCTTTATAGATCACAACTAAACAACAATTGTGGACCAAACAGGTTTGGTACAGTGTGTTCATGTGTCATTGTGCTATTGTAGGATGAGGATATGGCTCTGCAGAATGAAGAAGATGATGAGGACGACATGGTAGATGTAATTGGCCGACAGCTGTTGGGTGCCTGTCCCTGGCTTTCAGATGTAGAGGACACTGTGACCGATGGACTCATTGGGGTGTGGAGGAGAGTGGTTGATCGGATCTTCAGCCTCTACCGGGTCTCCTGCAGGGCTTACTTCACTTTCCTCAAACTCAATGCTGGACAGGTCAGTGGTTACCTCATTGAATAATTATTCAACAGATTTCTAAACTATAAATCGATCATGAATTTATTGATGCTTCAATTATTAGGTGCCTATAGAT[G/T]AAGATGATCCCAAGCTGCTCCTGAACAACCAGAACAGCAAGCAGAGCAGCGATGATGTCATTGTCATGGCAACCCTCCGTCTGCTGCGCTTGTTGGTGAAGCACGCAGGAGAGTTGAGGGAAGGTCTGGAGCACGGTTTGGCATCCACACCTACTGCTCCCTGGAGAGGTAAGAACATTGATATTCATAAGGGTTATAAGCACTTTCCTTTGTGGACATTGTAAACATTATTTACGTCAGTATTCAATGGAATTATTGTATACATGTTTTTCTTTCTCCAGGTATTATCCCTCAGTTATTCTCCAGACTTAATCACCCTGAAGCCTACATCCGCCAGAGCATCTGCAGTCTGCTGTGTAGAGTGGCCCAAGATTCCCCACACCTTATCCTTTATCCTGCCATTGTCGGATCAATCTCTCTTGGTGGAGAGGCTCAGACGGCAGGTATGTATCGCTGGCAAGGCTTAGAACATGTCACCAAAGCATTTTTGCCCAATCAAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa40090
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000076764 | Nonsense | 2283 | 3635 | 42 | 62 |
ENSDART00000076796 | Nonsense | 2288 | 3640 | 42 | 62 |
Genomic Location (Zv9):
Chromosome 3 (position 31282393)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 3 | 31000432 |
GRCz11 | 3 | 31131274 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AACCTCTTGGCAAAGGAGCTCTGGTGTTCCTGCACCACTCCTAGTGAGTG[G/A]TGGAGCGTCACTCAGGTAAGAGGAACCACTGCTCATGTTCTAGTCATGCT
Long Flanking Sequence:
CTAAAGTGAATCAGCAGGAGAGCCCGAGGTTTCAAGCCCGTCATTATTCTGTCACACCTCTGGGTACCAGATCTGGCCTCATCCAGTGGGTGGATGGAGCCACTCCACTGTTTGGCCTGTACAAACGTTGGCAGCAGCGTGAAGCTGTGGTCCAAGCCCAGAAGGTGAGACTGAGAATTAACACTCAGCGCTTGTACTTGACTGTCTTTTATAAATATTTATGCTTAAAGATAATTGCAACCAAATGTATTCTGTTCTTGAATTTAGGCACAGGACTCCTTCCAGCAGCCTCAGAATCTTCCCATGGTCCCACGGCCCAGTGAGCTTTACTACAGTAAAATCAGTCCTGCCTTAAAGGCTGTCGGTCTCAGTTTGGATGTGTCACGTCGTGATTGGCCGTTAAGTGTTATGAGAGATGTTCTAAGAGAGCTGATGGAAGCCACGCCCCCTAACCTCTTGGCAAAGGAGCTCTGGTGTTCCTGCACCACTCCTAGTGAGTG[G/A]TGGAGCGTCACTCAGGTAAGAGGAACCACTGCTCATGTTCTAGTCATGCTTGACACATTGTAATTCAAAATACATTATGCTTTAATTAACCCACTCATGATATGTTTAGACTTACGCCAGATCCACCGCTGTGATGTCAATGGTGGGATACATTATTGGCTTGGGGGATCGTCACCTTGACAACGTGCTGATTGACATGACGACTGGCGAGGTGGTGCACATTGACTATAACGTCTGTTTTGAGAAGGGTGAGTGCTTTTTCACTTGAAAGCAAATCTAAGCAGTTTATTGGCATGGATGATTCATAACTTGATTAATCTGACAGGAAAAAGCTTGAGAGTGCCTGAGAAAGTTCCTTTTCGCATGACCCACAACATCGAGACTGCTCTGGGGGTCACAGGAGTTGAGGGAATCTTTAGACTGTCCTGTGAACAGGTGAGAGTGTGTGAATTTTTCAATTTTGATTGTCTAATTTTTGAAAGCCCATACATGATTTCAAT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa33203
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000076764 | Essential Splice Site | 2444 | 3635 | 45 | 62 |
ENSDART00000076796 | Essential Splice Site | 2449 | 3640 | 45 | 62 |
Genomic Location (Zv9):
Chromosome 3 (position 31281652)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 3 | 30999691 |
GRCz11 | 3 | 31130533 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GAGAGACATCACACGTAGCCTTTTCTCCTCCCGTGTGGCTGAAATTAAGG[T/A]GAGAATTTTGTCTGAATAATAGCAAAATATATCAGTTGCAGTTATTAATG
Long Flanking Sequence:
TGAGAAGGGTGAGTGCTTTTTCACTTGAAAGCAAATCTAAGCAGTTTATTGGCATGGATGATTCATAACTTGATTAATCTGACAGGAAAAAGCTTGAGAGTGCCTGAGAAAGTTCCTTTTCGCATGACCCACAACATCGAGACTGCTCTGGGGGTCACAGGAGTTGAGGGAATCTTTAGACTGTCCTGTGAACAGGTGAGAGTGTGTGAATTTTTCAATTTTGATTGTCTAATTTTTGAAAGCCCATACATGATTTCAATGGTGTTTTTGTCTTTTTCAGGTGGTCCAGATAATGCGGCGTGGGAGAGAGACCCTCTTGACTCTTCTAGAGGCCTTTGTCTATGACCCATTGGTGGACTGGACAGCAGGCGGTGAGGTGGGCTTTGCAGGTGCTGTGTATGGAGGAGGTGGTCAGCAGGCTGAGAACAAGCAGAGCAAGAGAGAGATGGAGAGAGACATCACACGTAGCCTTTTCTCCTCCCGTGTGGCTGAAATTAAGG[T/A]GAGAATTTTGTCTGAATAATAGCAAAATATATCAGTTGCAGTTATTAATGATGCTTTCAGCTAATTTGAAAAGTAATTAATTTCTTAAATATTAAAGGCTGTGCAATTTGGGGAAGATATCTAACTGCGTTTTTTTTTCTCTCTCTATTTTTCTCTAAACAGATATTGCGATTTCGACTTGTGATTTAATGTTGTAGTCAAGTTTCAGCTTCAATATTCTTTATCACAGTTTTTACTGCTAAAATGTGAGTGTTAGTTAAAAAAAAGAAACTGAAAAGATATTAACTACAACTTTTTTTCAAATTTGTTTATAAATATTCAGAAATGAAACACTATTTTTTCTCTAGATTAAACAGTAGTGAGTTATGGCATTAGTTATATCCTGGTGCCTTCGTCATGTTTTTTTTATAAGGTGTAACAGCTGCAAACATAAATTGTACTTTGCTGTTGCTTGCTACTAGATTGAGTGTCACTGGCACTGACTTTGACTTTTTAGCAAC
Associated Phenotype:
Not determined