ZMP
GPC5
Ensembl ID:
Description:
glypican 5 [Source:HGNC Symbol;Acc:4453]
Human Orthologue:
GPC5
Human Description:
glypican 5 [Source:HGNC Symbol;Acc:4453]
Mouse Orthologue:
Gpc5
Mouse Description:
glypican 5 Gene [Source:MGI Symbol;Acc:MGI:1194894]
Alleles
There is 1 allele of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa44411 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa44411
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000125684 | Essential Splice Site | 175 | 268 | 3 | 5 |
Genomic Location (Zv9):
Chromosome Zv9_NA503 (position 153433)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 1 | 2868163 |
| GRCz11 | 1 | 3221037 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCCTCTGCAGACGGACGGGCCTGCTGGAACGGAGACGACGTGGCCAGAAG[G/A]TACAAATAAGTCAACTTTTGCCTCTTGGTTTCTTTCTCTCTGATTTAAAT
Long Flanking Sequence:
AAATAGGGGCAGTACAGAAAGTTTCTGTAATGTCACAGTTCTATAATCATCAGAAATCTGCAGATTTTTACCAAAATTCCCTGCAGAAATAGCAAAAAACGTCTGCAGATTCTGTCTGGCCCTACCCATAAGTAATAAATAATAAATTCAAATTCAAATCAGGTAGTGTATAATACATTTTATTTAAAGGCGCATTTCTGGCAACTCAAGGACACTGTACAATAAAACAAGAGCAATAAAACAAGAAGACGAATTAACTAGCGCAAAAACAATTAGGTATTAAAAGCCAACTTGAATAAGTGAGTTTTGAGTCTTGCCTTAAATAATAAAGCATGTCTCGTTGTCCTCTTCTTCTTCTCTGCGTGTGTTTTCAGTGAGTTCCTCCACAGTCTGCGTTTATATCGCACTTTTTACGGCGCTCTGGCTGATCAGCTGTGCATCAGTGAACTGGCCTCTGCAGACGGACGGGCCTGCTGGAACGGAGACGACGTGGCCAGAAG[G/A]TACAAATAAGTCAACTTTTGCCTCTTGGTTTCTTTCTCTCTGATTTAAATCATTAAATACTGAGTGTTTGCTGATAGACTGCTGGTTTTCTGTAACAAGTGGAGGTGAGTTTAGAAAGAGCGACATTCAGTCTGAGTCAAACCTGCCAACCTGATATCTCCAAGTAGGAGATGTTACTGGGTTACATGTTGATCCTGGAGCAACATCCCAATCAGCCAATCAGAATTAGGGATACGTTTACAGCTCATGTTTATGCTTAAGGTTAGGTTTATGCACTTCTGCATGATTGTTATCCAACTATTAGTCTTCTCTGATTTTTGGGAGTAATTTACAGTTATGGTTGGGTTTAAGGGTGGAGAATATGTATGGATTACATTTTCCAATGATCGTCCAGGATCAGCATAGATGTTTCAGGTTTCAAACAAGCCTGAAGGACTTAATTAGTTTGATGAGGTGTGTTTAATTAGGGTTGGAACTCAGCTGTGCAGAGCGCCGGCCCT
Associated Phenotype:
Not determined