ZMP
shank2
Ensembl ID:
ZFIN ID:
Description:
hypothetical protein LOC567595 [Source:RefSeq peptide;Acc:NP_001121819]
Human Orthologue:
SHANK2
Human Description:
SH3 and multiple ankyrin repeat domains 2 [Source:HGNC Symbol;Acc:14295]
Mouse Orthologue:
Shank2
Mouse Description:
SH3/ankyrin domain gene 2 Gene [Source:MGI Symbol;Acc:MGI:2671987]
Alleles
There are 6 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa14519 | Nonsense | Available for shipment | Available now |
| sa38026 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa14519
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000089981 | Nonsense | 194 | 1710 | 6 | 30 |
| ENSDART00000145387 | Nonsense | 227 | 1800 | 5 | 21 |
Genomic Location (Zv9):
Chromosome 25 (position 14447017)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 25 | 14089940 |
| GRCz11 | 25 | 14186340 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GCGGGKCTCATTTGGACTTTCGCTCCCGGGATGGCATGACTGCCCTGCAC[A/T]AAGCAGCCAGAGCCAAAAACCAGATCGCTCTCAAGGTAATAAATAACCTC
Long Flanking Sequence:
TGTTTTATTCTATTTTATTTTATTTTTTTATATTTCTATATTTTTGTCGTTTTTTTATATTATTTTGTTAAATCAATTTTTATATATAGTTTCTTTAAGAAATTTAATGTCAGTAAGATTAATTTTATTTTAATTTATACTTTACTTATTTTATTTTATTATTTTTTTATAAGCAATTTCATAATTTGCTCAACAAAACATTGCAATCACATAAATAAGTAAGATATTTATATGTATTCAAATAATAAAGTGCCCATTATAATCCAGTATTATACATCATTAATCACCATTGATGAAGCATATGAATCCTTTAATTAACATCATGCTTTTATTAAAAGAGATTTCCCCAGCGTGTAGTAATGAGTTTGTGTCTGTTGTCCACAGAGACCCCGCTGACCCTTGCTGCTCACTTGGACAATATGCTGGAGATTATAGTGACTCTAAAGAACGGCGGGGCTCATTTGGACTTTCGCTCCCGGGATGGCATGACTGCCCTGCAC[A/T]AAGCAGCCAGAGCCAAAAACCAGATCGCTCTCAAGGTAATAAATAACCTCATCCCGAACGCCAGCTTCACTTTATGGCTGTGTTAGAGCAATCTTCTTCAGTGATTGTCATTTTGTTTTTTTATTTTTGGTGCCATAGATGTGAAACAGAGCAGTACAGCGATGTCTTTTAGTGTCAGAGAGAACATTTATTACTTTGACAGAGCGTACTTTCATTCAAAGCACACTCTGTCTTGTTTTTCTCTCTCTCTTTCTATTAAGGCGAGACACTGCAGACAAAAACACTGATGTTCAAATCTTCAAGTGTTTTGGAACTTTTCAAGTGTTTTTTTTTTCTAATTTGAACAAAACATCCAAAATACGCATTTCTTTTTGTCACACTTAATTAATTAGAGTTTGTAAATCTCAATTACAATACATTTTTTGCAGAGTATTTTCCTAAAACATTTTATTTTCTGCACTGAGCCACAAATGTCAACTATATTCAACATTTCATTCTAC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa38026
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000089981 | Nonsense | 566 | 1710 | 18 | 30 |
| ENSDART00000145387 | Nonsense | 603 | 1800 | 13 | 21 |
Genomic Location (Zv9):
Chromosome 25 (position 14557375)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 25 | 14200298 |
| GRCz11 | 25 | 14296698 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATGTCTTCACAGATGCCAGAGCGGACCGTTCAGAGAGAAGGAAGCTCTTT[C/T]GACACTACACTGTGGGATCTTATGACAGTTTTGATGCATCAAGGTACGAT
Long Flanking Sequence:
CTTTATTTTCCAGAGCACAGTCAGTATCGTGTTGGCTAAATGATTAAATATGTTTAAAAAATGGCACCTGGGACTGTATGACATATGGCACACAGTAAGACCATTTTGTGACTAGACAGAGTTTTTTATGTAATTATGTAACCAAAGCTTTATAACATTCTCACTTTATCACATCTGCTGTACCTCTCTAAAATTCCAGTGCTTATTTTTATTCCATTTGCGCATTTTATATTCAGCGTGAAAGTGATGATAATGATGCTGAAGCTGTCAAAGTTTGTGAGTTTGTACTTTAACACACCAGAGTTGCGGTTGAAACTTTGGCTTATGTGTGTGAATAATCAGTAAAAAAAGAATATTATAGCACTTTGTAATAAGCACATATTATGTAGGCCTTGCAACACTGCAATTTTACACAATCAGGGTGATGATCTGAATTAAATATCTGTAAACATGTCTTCACAGATGCCAGAGCGGACCGTTCAGAGAGAAGGAAGCTCTTT[C/T]GACACTACACTGTGGGATCTTATGACAGTTTTGATGCATCAAGGTACGATCAAACTTTTTTCTAATTTTAGTATGTGGTGTTTGTAATATAGGCTCATTCTGAAAACGTAGCCCTATATACATTCCTGGAGATCACAAATTATGTAGCCAGAGCTACGTATGGCTGCATTTTGTCTTTAAAACAAACACTACCGGGTGGTATGACGCCGAACCGTTTCACGCTAGCAGCTGACCGCTTACTTGCGTATGGGTGGCTTTCCTGCTGTTACCAGTTTGTCTGTTAGCTCGACATGTGCGTCGTCGGACTTGAGACACAGAGCGTGAGTTGACCGTGATGATGGGGTTTGGTTTATTGGTCGGTTGGTCAGTCAGTCGACAGTGGCCTCCGGTGGATTTATATGAGAAAAGCATGCATAAATGCATGCACTTGCGAGAGAAATTTGAGATCTCAAAAAGCAAACATAGCGGCCTCTGGTAGAATCGCGAAAAACAAAAACTGC
Associated Phenotype:
Not determined