ZMP
itga11b
Ensembl ID:
ZFIN ID:
Human Orthologue:
ITGA11
Human Description:
integrin, alpha 11 [Source:HGNC Symbol;Acc:6136]
Mouse Orthologue:
Itga11
Mouse Description:
integrin alpha 11 Gene [Source:MGI Symbol;Acc:MGI:2442114]
Alleles
There are 4 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa8853 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
sa5994 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
sa44212 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa8853
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000022861 | Essential Splice Site | 570 | 1164 | 13 | 29 |
Genomic Location (Zv9):
Chromosome 25 (position 1339918)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 25 | 1292388 |
GRCz11 | 25 | 1373033 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TTTACCTCTTCTACGGGCTGAAAAACAGCATACAAACCAAATATAAACAG[G/A]TACGAGTTAACTRAGAGTGACTGATAKTTRATAAACATGAATGAACCACA
Long Flanking Sequence:
GTAAATATTACTTAGGTCTATATTTGTTATATAGGTTATGTTAATGTTATCTTATTAGCATTAAATACAATACTAATGGATTTTGATTTTAAAGAGATATATAAGATTAACTAAGATATTAACATCACCCATTCTTTGCAAGTAGTTTTCATTATCAGATGAGTTTGACTAACGTTAGCAGTCGGATCCTTATTTTTTAACTAGTGTTCATGAACAATAAATCAGAGAGGTTTCAATCACATTTTCAGGATAGTCATAAACTATAATACCATGTTAAATGTCTGTTTATTATACAGGGCTCTTTTATACCAGATGGGACTCTTGGTCCGTCAGAACATTCCCATGATTCTCGGTTTGGGGCGGCCATGTCGGCTCTTCCGGATCTGAATGGTGACGGTTTCAGCGAGCTGGTAGTCGGTGCACCATTGGAGGACAACCACAGAGGAGCCATTTACCTCTTCTACGGGCTGAAAAACAGCATACAAACCAAATATAAACAG[G/A]TACGAGTTAACTGAGAGTGACTGATAGTTAATAAACATGAATGAACCACATTCCAGTCAGGCCAAATACAAAATATTCGCTCATATTTATTTTTCATTTGTTAACGTATTTAATTAAATTCAATTCAGCTTTATTTGTATAGCGCTTTTACAATGTAGATTGTGTCAAAGCAGCTTCACATAAATGGTCATAGTAACTGGATCAGGGTAGTTCAGTTTTTAGTGTTTGAGTTCAGTTCAGTTTAGCTCAGTTCAGTGTGGTTTAAAGTCATTACTGAGAGTCCAAACACTGAAGAGCAAATTCATCTGCAAATTCATTTAATAAGTATGAACAAAGATTGTACCATATATATTGATTTATTAATCATAGTTAAGACAACACAATGATTTTTAGCCATCATCTGTTCATTTTCTTATGCAAATGTGTGTAAATATACATGTGTTCAGGTTTTTGTATTAATTTTAATAATATACTGAAAGACTAATATGCAAATGTTTGTA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa5994
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000022861 | Essential Splice Site | 1070 | 1164 | 26 | 29 |
ENSDART00000022861 | Essential Splice Site | 1070 | 1164 | 26 | 29 |
Genomic Location (Zv9):
Chromosome 25 (position 1362980)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 25 | 1269326 |
GRCz11 | 25 | 1349971 |
KASP Assay ID:
554-3949.1 (used for ordering genotyping assays)
KASP Sequence:
ACGTTAGCATCACCGTCACAGGATGGCTCAATCTTCACACTTTATTAGCC[G/A]TGAGTATGTTAGAAATAAGTAACGAATAACTGACAAAAATGAGTTTGTCT
Long Flanking Sequence:
CTTTCTCAAAAAACTGAGTTTGCATTTCTCAACGCTGACTTTTGTCCTGAAATTGCATCTTTTTTGGAGGAAATTCAGACTGTTTTTTTATTCAGAAATTACATGTCAATTCAGATCTCTTTATTTTCTTTTTATTCTCTACTAAATGCGTTCATCTGCATTCACAAAGCAGCAAAATGCAAAACTAACAGTGCTAATTAATCAAACTACTCAAGCTGCTTTATCACTCGCTGTTGGCTACAGATAGCATAATTATTCATATGCAGTCTATATGTGCTCCAAATTGGAAATGATCCATTCACAGCTTCCTCTCTGGCACATTCACTTTCCAAGTGCTACGTGATCAAAAGCATTTAATGTCCTCCATATTGTGTTGTTTGTGTTGACAGAACGCCTCCACCAGTGACGCATTATTAGCACAGTGCCGATTCAACCTGTCTCCACAAGCAGACGTTAGCATCACCGTCACAGGATGGCTCAATCTTCACACTTTATTAGCC[G/A]TGAGTATGTTAGAAATAAGTAACGAATAACTGACAAAAATGAGTTTGTCTGACAATTATGACTTTTTTTACGTCGCACAATTTTGTCTTTGTCTTTGAAATTTTTTCATTTTTTCATAATTATTGACTTTATGAATTATCTCGTAATGTTTTATTAATTGAGATTACAGCTCGTAATTTGTATGTTTTTTAATTGAGTTTACATCTCGTAATTTGTACGTTTTTTTATTGAGTTTAAATCTCGTACTTTGTATTTTTTTTGAGTTTACATCTTGTAATTTGTATTTTTTTTATTGAGTTTACATTTCGTAATTTGTAAGTTTTTTAATTGAGTTTACATCTCGTAATTTGTATGTTTTTTGAGTTTACATCTCGTAATTTGTACGTTTTTTTAATTGAGTTTACATCTCGTAATTTGTATTTTTTTATTGAGTTTACATCTTGTAATTTGTATTTTTTTTATTGAGTTTACATTTCGTAATTTGTAAGTTTTTTAATTGA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa44212
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000022861 | Essential Splice Site | 1070 | 1164 | 26 | 29 |
ENSDART00000022861 | Essential Splice Site | 1070 | 1164 | 26 | 29 |
Genomic Location (Zv9):
Chromosome 25 (position 1362980)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 25 | 1269326 |
GRCz11 | 25 | 1349971 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACGTTAGCATCACCGTCACAGGATGGCTCAATCTTCACACTTTATTAGCC[G/T]TGAGTATGTTAGAAATAAGTAACGAATAACTGACAAAAATGAGTTTGTCT
Long Flanking Sequence:
CTTTCTCAAAAAACTGAGTTTGCATTTCTCAACGCTGACTTTTGTCCTGAAATTGCATCTTTTTTGGAGGAAATTCAGACTGTTTTTTTATTCAGAAATTACATGTCAATTCAGATCTCTTTATTTTCTTTTTATTCTCTACTAAATGCGTTCATCTGCATTCACAAAGCAGCAAAATGCAAAACTAACAGTGCTAATTAATCAAACTACTCAAGCTGCTTTATCACTCGCTGTTGGCTACAGATAGCATAATTATTCATATGCAGTCTATATGTGCTCCAAATTGGAAATGATCCATTCACAGCTTCCTCTCTGGCACATTCACTTTCCAAGTGCTACGTGATCAAAAGCATTTAATGTCCTCCATATTGTGTTGTTTGTGTTGACAGAACGCCTCCACCAGTGACGCATTATTAGCACAGTGCCGATTCAACCTGTCTCCACAAGCAGACGTTAGCATCACCGTCACAGGATGGCTCAATCTTCACACTTTATTAGCC[G/T]TGAGTATGTTAGAAATAAGTAACGAATAACTGACAAAAATGAGTTTGTCTGACAATTATGACTTTTTTTACGTCGCACAATTTTGTCTTTGTCTTTGAAATTTTTTCATTTTTTCATAATTATTGACTTTATGAATTATCTCGTAATGTTTTATTAATTGAGATTACAGCTCGTAATTTGTATGTTTTTTAATTGAGTTTACATCTCGTAATTTGTACGTTTTTTTATTGAGTTTAAATCTCGTACTTTGTATTTTTTTTGAGTTTACATCTTGTAATTTGTATTTTTTTTATTGAGTTTACATTTCGTAATTTGTAAGTTTTTTAATTGAGTTTACATCTCGTAATTTGTATGTTTTTTGAGTTTACATCTCGTAATTTGTACGTTTTTTTAATTGAGTTTACATCTCGTAATTTGTATTTTTTTATTGAGTTTACATCTTGTAATTTGTATTTTTTTTATTGAGTTTACATTTCGTAATTTGTAAGTTTTTTAATTGA
Associated Phenotype:
Not determined