Busch Lab

ZMP

si:dkey-205h13.2

Ensembl ID:
ENSDARG00000089429
ZFIN ID:
ZDB-GENE-080225-18
Human Orthologues:
CILP, CILP2
Human Descriptions:
cartilage intermediate layer protein 2 [Source:HGNC Symbol;Acc:24213]
cartilage intermediate layer protein, nucleotide pyrophosphohydrolase [Source:HGNC Symbol;Acc:1980]
Mouse Orthologues:
Cilp, Cilp2
Mouse Descriptions:
cartilage intermediate layer protein 2 Gene [Source:MGI Symbol;Acc:MGI:1915959]
cartilage intermediate layer protein, nucleotide pyrophosphohydrolase Gene [Source:MGI Symbol;Acc:MG

Alleles

There are 3 alleles of this gene:

Allele Name Consequence Status Availability
sa29939 Nonsense Mutation detected in F1 DNA Not yet available
sa43992 Nonsense Mutation detected in F1 DNA Not yet available
sa11380 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa29939
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > G
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000124811 None None 308 None 7
ENSDART00000135988 Nonsense 267 384 10 12
Genomic Location (Zv9):
Chromosome 23 (position 26772999)
Other Location(s):
Assembly Chromosome Position
GRCz10 23 26605821
GRCz11 23 26532362
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GGTGTCTAGTTATTGCCTTAATTCATGCTTTAAATGTGTTTTTGAAGGTA[T/G]AATCCAACAGTTGGGTTTTCCTGTGTAAACGCAAACCAAGCATCAGGGAT
Long Flanking Sequence:
TGCCAACCACGTATGTATATTCATCACATATACTTTGTTACTCATTGTATACATGCTTATATATTTTAAAAATAATTGATGGGTGTTTTGAAGTATTTGATCATTTTTATTTTTATAAGCATTGTTTTTATTACTTATCTATCTCATAGTTTTCCTACAGTTGTTACGTGTTTACACAATTTAGTGATTTTTTTTTTTAACTTGATGAATTCTCTGTACTATTTTCATCAGAGTGTGTTACCAGGTGGTTTGATTCTGACAACCCTAACACTAATGGGAGTGATTCTGAACTCTTGAGTGTCCTTCAAAGTGCAAACGCTGGGTACATTTGTTCAAATCCACTCGGAATAGAGGCTCAGACCATCTCTGGCCAACCAGCATCTCAAACAGGAAACGTCTTTCAATCGTGAGTTTATCAAGGTTTTGAGTCAGTCATGATAATACAGAAATGGTGTCTAGTTATTGCCTTAATTCATGCTTTAAATGTGTTTTTGAAGGTA[T/G]AATCCAACAGTTGGGTTTTCCTGTGTAAACGCAAACCAAGCATCAGGGATGTGTGCTGATTATAAAGTGCGCTTCACCTGTCCAGAGCAATGGTGTTCAAGTGAGTAAGAAAATAGATTGAAATAAAACAATATTCTACCTAATATGTGACTAGTTTTATATAATATATAGATATCTTCTAATGTTCAAAAATTCAGGTATTAATTCCAAGATGTTCAAAGTTCAGAATAGGAACCAAAAACTTTGTCAAAACATTGCATGTGACTTGTAATGTTTCTATGCAAGCATACGAAGCTCCAAGAATAAATCTGTGTGCCTGAAAAACTGTAAATACGTCTCTGTTTACCTACTAAATAGCCTTTCAGGTTGTTCAGCCTGATCTCACGAGGAAACGGTATTTTACATATTTGACAGGTAAGTGGCTAATTCATACGAATTCGTACGAGTTTAGTCGTTCGAAAATGTACGATTTTAAAAAGGAGGTGTGGCACCCAACTCCA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa43992
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000124811 Nonsense 196 308 5 7
ENSDART00000135988 None None 384 None 12
Genomic Location (Zv9):
Chromosome 23 (position 26767413)
Other Location(s):
Assembly Chromosome Position
GRCz10 23 26600235
GRCz11 23 26526776
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CATATGTGCTGATTATAAGGTGCGCTTCACCTGTCCAGAGGAATGGTGTT[C/A]AAGTGAGTTCACCCGATGTCATGATAACACTAATTGATTTAATTAAGAAA
Long Flanking Sequence:
TTTTGTTTGTTTGTTTTAATGTTTCCCTCTGTACTGCATTCATCAGAGTGTGTAACCAGGTGGTTTGATTCTGACGACCCTACCACAAAGGGAGGAGATTCTGAGCTCTTGACTAACCTTCTCAGTGCATACTCTGGATCCATTTGTCCAAATCCACTCGGAATAGAGGCTCAGACAGTGTCAGGCCAGTCAGCATCTCAGACGGGAAACGTTTTTCAAGTGTGAGTCTTTCAAAAAATATTAAAACGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTCTATGTCTGTGTGTGTGTCTGTGTGTGTGTGTGTGTCTGTGTCTTTGTCTGTTTCTGTGTCTTTGTATGTTTGTTTTTGGCAAATATTAAATCCTAAACATTTTGCACATTTTTCTGAAGATATGATCCTACAAATGGGTTTTCCTGTTTAAATGCAAACCAAGGAGGAGCCATATGTGCTGATTATAAGGTGCGCTTCACCTGTCCAGAGGAATGGTGTT[C/A]AAGTGAGTTCACCCGATGTCATGATAACACTAATTGATTTAATTAAGAAAAATCTAATAACTATCTAGTCATGCCTTGGATTAATGTACTGGAGATAGACCTCTTTTTTATTTTTATTTTTATAAAGTTTCTAGGAGCATGACTCAAAGAGGTAAAAGAATTCATATGAAAAACTGCTTTAACCAACACATTGGCTTTATAACATTTCGTGTCATTCTCTTACAGAATGTATGACACCGTGGTTTGATCGAGATAATCCTGGTGGAATGGGAGACTATGAGCCACTGTCATTAACTCCAACAGCATTCCCACAACAGGTCTGTGCTCAGCCCATTGCCATTGAGGTTTCAACCATTACCGGGACTCCTGTACTGCCAACTGGAAACCATTTTCAAACGTAAGATTTAAGAATACTTCTTTTAGGGCTGTTAAACGATACACATATTTAATCGCAATTAGCTGCATAAATACCATGAGGTAACTTGTGATTAATCACAACT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa11380
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000124811 Nonsense 253 308 6 7
ENSDART00000135988 None None 384 None 12
Genomic Location (Zv9):
Chromosome 23 (position 26767020)
Other Location(s):
Assembly Chromosome Position
GRCz10 23 26599842
GRCz11 23 26526383
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AGGTWTCAACYATTACCGGGACTCCTGTACYGCCAACTGGAAACCATTTT[C/T]AAACGTAAGATTTAAGAATACTTCTTTTAGGGCTGTTAAAYGATACAMAT
Long Flanking Sequence:
CTGAAGATATGATCCTACAAATGGGTTTTCCTGTTTAAATGCAAACCAAGGAGGAGCCATATGTGCTGATTATAAGGTGCGCTTCACCTGTCCAGAGGAATGGTGTTCAAGTGAGTTCACCCGATGTCATGATAACACTAATTGATTTAATTAAGAAAAATCTAATAACTATCTAGTCATGCCTTGGATTAATGTACTGGAGATAGACCTCTTTTTTATTTTTATTTTTATAAAGTTTCTAGGAGCATGACTCAAAGAGGTAAAAGAATTCATATGAAAAACTGCTTTAACCAACACATTGGCTTTATAACATTTCGTGTCATTCTCTTACAGAATGTATGACACCGTGGTTTGATCGAGATAATCCTGGTGGAATGGGAGACTATGAGCCACTGTCATTAACTCCAACAGCATTCCCACAACAGGTCTGTGCTCAGCCCATTGCCATTGAGGTTTCAACCATTACCGGGACTCCTGTACTGCCAACTGGAAACCATTTT[C/T]AAACGTAAGATTTAAGAATACTTCTTTTAGGGCTGTTAAACGATACACATATTTAATCGCAATTAGCTGCATAAATACCATGAGGTAACTTGTGATTAATCACAACTTAATTGTTCTAAATGTGTCCTAAAATAATATAATGTTGCAATGTGGAACTGCATAAAACAATATTATTGATTTCAGTGCACACAATAAAAAACTGAAACATAATATAGGAATGAGCTGAAATTAAATTTTTTGGCCTGAAGACTGAGAACCAAACACATTTCTTTTCTAAAATGCGAGTGTTAATCGCACGTTAGTAAAATTAGTGCTGTTAAAAAAAAATTTGCTTTTTATGTGTTATTAACGTGTTAATTTTGACAGCCCTAATATCTATTTCTATATGTATTTGTAAAGATTAACAACCACTCTCTCTTATTTTGCAGATTCGATCCACTTCTGGGCTTTGAGTGTGTGAATGATTTTCAGAATGGATGGACCTGTCTGGACTACAAGGT
Associated Phenotype:
Not determined