ZMP
si:dkey-31e3.5
Ensembl ID:
ZFIN ID:
Human Orthologue:
PDZRN3
Human Description:
PDZ domain containing ring finger 3 [Source:HGNC Symbol;Acc:17704]
Mouse Orthologue:
Pdzrn3
Mouse Description:
PDZ domain containing RING finger 3 Gene [Source:MGI Symbol;Acc:MGI:1933157]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa45790 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa43923 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa45790
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000112965 | Nonsense | 52 | 1033 | 1 | 10 |
| ENSDART00000142533 | None | None | 87 | None | 3 |
Genomic Location (Zv9):
Chromosome 23 (position 11020348)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 23 | 10979150 |
| GRCz11 | 23 | 10914120 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTCTTCTGCGCCGCGTGCGCGCTCCAGTGGCTCTCCAAAGTCAACAGCTG[T/A]CCCGTCCAATGCCAGAAGATATCCAACAAAGAGCTGAACCAAGTCCTACC
Long Flanking Sequence:
ACCAGACAGTTGTGTATTTGAAACACTGGACATCTGGCGCTGCTCCGTCTGTGATATTATTGTATTCCCACATAGGACACGAATAGTCTCCTCAGATGTGCTTGCCATGGCCATTCATACAGTAATACAGTTCTTAAAGCAACACAGCACGTCATCTACATAATTCTTTAATCAAGCGCTCATCCGCGGGCGCGCGCACGAACTGCTCTGCTTGTTGAGTGTTTACGGTAGACGCGCCTCTTCTCCTGACTCAAACTAGTAGTTTATCACTCATCTCATCAGCGTGGGCAGACATCTCTCTCTCTCATATTTCCTCAGTCGACTCTGTGGTCCACCTCACATAGTATGGGCTTTGACTTAGACCGTTTTGAGGGTCCTGTAGACCCGGACTTGATCTGTAAACTGTGCGGAAAAGTTTTGGAGGATCCTCTCGCCACTCCGTGCGGACATGTCTTCTGCGCCGCGTGCGCGCTCCAGTGGCTCTCCAAAGTCAACAGCTG[T/A]CCCGTCCAATGCCAGAAGATATCCAACAAAGAGCTGAACCAAGTCCTACCCCTCAAAAACCTCATTCTCAAACTGGACATCAAATGCGACCACCGCGAGCGAGGCTGCGCCCGGGTGATGAAGCTCCAGCATCTGGCGGAGCACGCGGAGATGTGCGACTTCTCTCCGGTCAGATGCAGGAATGAAGGATGCGACGCGGTGCTCAACCTGAAGGACGCGGCCTCACACCTGCAGGAGACGTGCGAGTACAGGGCGCTGGAGGTCTGTAAGAATGGATGTGGGCTTATGCTGACCCCCAAGGAAATGTCGGGGGAGCACAGCTGTCTCCAGGCTCTTAAAGCGCACGGCGGTCTCCTCCAGACCAAAGCGCAGAGTCTGGAGAAAGAGCTGAAGCGGCAGGCGCTGAGCTTCAGCAAGAGGGAAAGGTCTCTTCTGTCCAAACTCTCCGCGCTCCACTGCGAGCTGCACATCACCGCGCTTACCTTCCAGAAGAAAATCAC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa43923
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000112965 | Nonsense | 130 | 1033 | 1 | 10 |
| ENSDART00000142533 | None | None | 87 | None | 3 |
Genomic Location (Zv9):
Chromosome 23 (position 11020116)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 23 | 10978918 |
| GRCz11 | 23 | 10913888 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATGAAGGATGCGACGCGGTGCTCAACCTGAAGGACGCGGCCTCACACCTG[C/T]AGGAGACGTGCGAGTACAGGGCGCTGGAGGTCTGTAAGAATGGATGTGGG
Long Flanking Sequence:
CGCGCCTCTTCTCCTGACTCAAACTAGTAGTTTATCACTCATCTCATCAGCGTGGGCAGACATCTCTCTCTCTCATATTTCCTCAGTCGACTCTGTGGTCCACCTCACATAGTATGGGCTTTGACTTAGACCGTTTTGAGGGTCCTGTAGACCCGGACTTGATCTGTAAACTGTGCGGAAAAGTTTTGGAGGATCCTCTCGCCACTCCGTGCGGACATGTCTTCTGCGCCGCGTGCGCGCTCCAGTGGCTCTCCAAAGTCAACAGCTGTCCCGTCCAATGCCAGAAGATATCCAACAAAGAGCTGAACCAAGTCCTACCCCTCAAAAACCTCATTCTCAAACTGGACATCAAATGCGACCACCGCGAGCGAGGCTGCGCCCGGGTGATGAAGCTCCAGCATCTGGCGGAGCACGCGGAGATGTGCGACTTCTCTCCGGTCAGATGCAGGAATGAAGGATGCGACGCGGTGCTCAACCTGAAGGACGCGGCCTCACACCTG[C/T]AGGAGACGTGCGAGTACAGGGCGCTGGAGGTCTGTAAGAATGGATGTGGGCTTATGCTGACCCCCAAGGAAATGTCGGGGGAGCACAGCTGTCTCCAGGCTCTTAAAGCGCACGGCGGTCTCCTCCAGACCAAAGCGCAGAGTCTGGAGAAAGAGCTGAAGCGGCAGGCGCTGAGCTTCAGCAAGAGGGAAAGGTCTCTTCTGTCCAAACTCTCCGCGCTCCACTGCGAGCTGCACATCACCGCGCTTACCTTCCAGAAGAAAATCACCGAGTACAAGAGCAGGATTGACGCTCTGACCAACAGTTGGATGCCCCGAGATCAGGTCAGTGTATCATGAAGAGGTGCGAGTGGAGGGAACGCTGAAAAAGTCAAGCGTTCTTTTAAGTTAACATTTGTAAGACAAATTAAAGTGGCGTCCTTTCTGTGAAGCTCATTAATTGTTCACTTTGAGTTTAAATACTGGTTGGGAAACTTTGGAAACTTATAAATTCGAGAAGTG
Associated Phenotype:
Not determined