Busch Lab

ZMP

gata5

Ensembl ID:
ENSDARG00000017821
ZFIN ID:
ZDB-GENE-980526-340
Description:
transcription factor GATA-5 [Source:RefSeq peptide;Acc:NP_571310]
Human Orthologue:
GATA5
Human Description:
GATA binding protein 5 [Source:HGNC Symbol;Acc:15802]
Mouse Orthologue:
Gata5
Mouse Description:
GATA binding protein 5 Gene [Source:MGI Symbol;Acc:MGI:109497]

Alleles

There are 4 alleles of this gene:

Allele Name Consequence Status Availability
sa24255 Nonsense Available for shipment Available now
sa43913 Nonsense Mutation detected in F1 DNA Not yet available
hu3392 Essential Splice Site Available for shipment Available now
sa17489 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa24255
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000012194 Nonsense 50 383 2 7
Genomic Location (Zv9):
Chromosome 23 (position 7454465)
Other Location(s):
Assembly Chromosome Position
GRCz10 23 7446928
GRCz11 23 7380900
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACCACTCGTGTACCAGCCATGCTCCAGACCTTGCCCTACCTACAGACTTG[C/A]GAGTCCAGCCACCAAGCCCATGGGATCAGCAGTCACCACGCCTGGCCACA
Long Flanking Sequence:
ATATAAAGACGTTGTTAGGAAATATTAGTGTGTTAAAATAATTTGGGTTTTGTTCCGTTGTTATAATCAATCAGAACTACTATTAGGCTATATTGCATTGTTTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTTGTAAAATACCAATCTAATATTAAGAAAATAATTTGATTTTTGGTTTGTCATCAGGAAAGAATTTCATTTTCTGTGGCCTCTGATCAGGAAACCATCGCATTTGGAGATTTTGGACGTTAACAAGGTTTTTAACTAGCCTACAATCTGGGCGAATTTTGAGATTTCGAAATCTAGCTTATTCACTGGATATATCATGTATTCGAGCCTGGCTTTATCTTCCAACCCGTCCCCCTACGCACACGATTCCGGGAACTACATCCATCCGTCTGCCAGCTCACCTGTGTATGTACCCACCACTCGTGTACCAGCCATGCTCCAGACCTTGCCCTACCTACAGACTTG[C/A]GAGTCCAGCCACCAAGCCCATGGGATCAGCAGTCACCACGCCTGGCCACAGACTGGCACCGATAACTCTTCGTTCAACCCCGGTAGCCCTCATCCACCGCCCGGTTTCTCTTATTCGCACAGTCCGCCAGTGAGCAGCAGCACCGGCAGGGACGCCGCGTACCAGAACCCGTTAATGTTAAGTAACGGCGGCCGTGCGGATCAATATGGAAGTGCCCTGGTGCGCTCCGTCGGTGGCTCTTATTCCAGCCCGTACGCGGCCTACATGAGCCCGGAGATGGCAACCTCATGGACGCCTGGGCCCTTTGATGGCGGCATGATCGGTCTTCAGGGACGCCAGGGAACTCTACCGGGAAGGAGGTCCAGTATAGGTAAAAATCTTAACATGTTTTTGCCTTCTCATTTTTTTCTGTCTGGATATATAAATATGTAACCTACTCTAAAATATTGACGATGGTTGACTATATATGCACCGTTTTGTTTAACGCACTTTGAAATTAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa43913
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000012194 Nonsense 67 383 2 7
Genomic Location (Zv9):
Chromosome 23 (position 7454514)
Other Location(s):
Assembly Chromosome Position
GRCz10 23 7446977
GRCz11 23 7380949
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCGAGTCCAGCCACCAAGCCCATGGGATCAGCAGTCACCACGCCTGGCCA[C/T]AGACTGGCACCGATAACTCTTCGTTCAACCCCGGTAGCCCTCATCCACCG
Long Flanking Sequence:
TTGTTCCGTTGTTATAATCAATCAGAACTACTATTAGGCTATATTGCATTGTTTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTTGTAAAATACCAATCTAATATTAAGAAAATAATTTGATTTTTGGTTTGTCATCAGGAAAGAATTTCATTTTCTGTGGCCTCTGATCAGGAAACCATCGCATTTGGAGATTTTGGACGTTAACAAGGTTTTTAACTAGCCTACAATCTGGGCGAATTTTGAGATTTCGAAATCTAGCTTATTCACTGGATATATCATGTATTCGAGCCTGGCTTTATCTTCCAACCCGTCCCCCTACGCACACGATTCCGGGAACTACATCCATCCGTCTGCCAGCTCACCTGTGTATGTACCCACCACTCGTGTACCAGCCATGCTCCAGACCTTGCCCTACCTACAGACTTGCGAGTCCAGCCACCAAGCCCATGGGATCAGCAGTCACCACGCCTGGCCA[C/T]AGACTGGCACCGATAACTCTTCGTTCAACCCCGGTAGCCCTCATCCACCGCCCGGTTTCTCTTATTCGCACAGTCCGCCAGTGAGCAGCAGCACCGGCAGGGACGCCGCGTACCAGAACCCGTTAATGTTAAGTAACGGCGGCCGTGCGGATCAATATGGAAGTGCCCTGGTGCGCTCCGTCGGTGGCTCTTATTCCAGCCCGTACGCGGCCTACATGAGCCCGGAGATGGCAACCTCATGGACGCCTGGGCCCTTTGATGGCGGCATGATCGGTCTTCAGGGACGCCAGGGAACTCTACCGGGAAGGAGGTCCAGTATAGGTAAAAATCTTAACATGTTTTTGCCTTCTCATTTTTTTCTGTCTGGATATATAAATATGTAACCTACTCTAAAATATTGACGATGGTTGACTATATATGCACCGTTTTGTTTAACGCACTTTGAAATTATTTCGTCGTATGTTAAATTTAATACTACTAATTTGCAGTTGGGTAGTTTG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
hu3392
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000012194 Essential Splice Site 174 383 2 7
Genomic Location (Zv9):
Chromosome 23 (position 7454837)
Other Location(s):
Assembly Chromosome Position
GRCz10 23 7447300
GRCz11 23 7381272
KASP Assay ID:
554-0409.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GGTCTTCAGGGACGCCAGGGAACTCTACCGGGAAGGAGGTCCAGTATAGG[T/C]AAAAATCTTAACATGTTTTTGCCTTCTCATTTTTTTCTGTCTGGATATAT
Long Flanking Sequence:
TCTTCCAACCCGTCCCCCTACGCACACGATTCCGGGAACTACATCCATCCGTCTGCCAGCTCACCTGTGTATGTACCCACCACTCGTGTACCAGCCATGCTCCAGACCTTGCCCTACCTACAGACTTGCGAGTCCAGCCACCAAGCCCATGGGATCAGCAGTCACCACGCCTGGCCACAGACTGGCACCGATAACTCTTCGTTCAACCCCGGTAGCCCTCATCCACCGCCCGGTTTCTCTTATTCGCACAGTCCGCCAGTGAGCAGCAGCACCGGCAGGGACGCCGCGTACCAGAACCCGTTAATGTTAAGTAACGGCGGCCGTGCGGATCAATATGGAAGTGCCCTGGTGCGCTCCGTCGGTGGCTCTTATTCCAGCCCGTACGCGGCCTACATGAGCCCGGAGATGGCAACCTCATGGACGCCTGGGCCCTTTGATGGCGGCATGATCGGTCTTCAGGGACGCCAGGGAACTCTACCGGGAAGGAGGTCCAGTATAGG[T/C]AAAAATCTTAACATGTTTTTGCCTTCTCATTTTTTTCTGTCTGGATATATAAATATGTAACCTACTCTAAAATATTGACGATGGTTGACTATATATGCACCGTTTTGTTTAACGCACTTTGAAATTATTTCGTCGTATGTTAAATTTAATACTACTAATTTGCAGTTGGGTAGTTTGGAAATAGTTTAAAATCCATCTTTCAAGTCAGCAGGCAAAAATGGTTGGAATGGAGGGGGTTTCGTTTGATGCTGTGATCTTACAATTTATTACTGCGGTTTTAAAGGTTATTTATTGCTTTCCTTAAGTGTTTATGTTAGACTTAGAAGGCACTAGAATACCAGTTAGGGTACTCGGGCACTTTGCAAAACCTAATCAAAACAAAACTTGATCTTATTGCACTAATACACATCCTTTAATAGGGCAATGCAATCACTTTAATTTAAATGTTAATTTAATTCTCAACTATTGTCTGTCCACGTTGATAAAAGGGGCCCGTGCGC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa17489
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000012194 Nonsense 346 383 7 7
Genomic Location (Zv9):
Chromosome 23 (position 7463766)
Other Location(s):
Assembly Chromosome Position
GRCz10 23 7456229
GRCz11 23 7390201
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TAATATRCATTGTCAGCTGACAGSAWTTCCCTGTGCTCTTTCTAAGGCAT[C/A]RACACARTTGGATAGTGCMAGTTCTGCCCATGTGGACATCAAATATGAAG
Long Flanking Sequence:
TCTCTGATTGGTGGAATATTCTATACAGTATCATGTGTACATTGTCTGTTGTAATTCTTTTTTTAATAAAAAAAAAAGTTGAATTGTTGGGAAGAGATTAATTCAACAAAAATATGTACACCCAATTAACGTCCTCAAAATTCACCAAAAGTCTGCCTTTAAAGGTTTATAAGATGAAGTACAGAACTTGATTTGATTCATTGTGAACTAATTAGATGATTGTGGCTACCTATTGGTGGATCTTTTGTGATTGACAGATTTGCCTCATTCCAGTAAGCCTATAATCAGACTAGAGAGATGTCAATGAAAATTAAGGGGATGTTACTTTGATAAAAAATATTACAAGAGTACATGAATTAAAAAAAAAAAAAGTAAATCCTATTTTCTGTTCCACTGAAGAAAGTATGAAACAATGTAATAAGTCTATTATCATTTACCCACTGTTAAAGATAATATACATTGTCAGCTGACAGCATTTCCCTGTGCTCTTTCTAAGGCAT[C/A]GACACAGTTGGATAGTGCCAGTTCTGCCCATGTGGACATCAAATATGAAGACTACACATACACCCCGACGTCGATCGCCCCACAGAACTCCTGGTGTGCTCTGTCTCAAGCGTGATCCGAGACCTCCACTGAAACCTCTCTGGCATGGGAGAAAAGACTTTTAACTGAATCTACCTAATAGGACTTTTACACAAATGTAGACAGACGGTGCTTAGGAAAGCAAGACATTGACAGTAATTTGTGCTACTTTTCCTCCTTGATTTATGGTGGCATATCTATGATGTCACGGCCAATTCATGCAATTCCACCAAAAATATGGTGGATGACAAGCAGCGCCTCTGTAACAGTTCTTGAGTTCCAATGATCGGGAGGACAAAAAACATGCTTTTTATGGCTACTGAACGTTTCATGGCTTAGTTGTTAATGATTACCTTTTAAGATACATTATTTATGTTGAGATAAGAATGGTGGAGGCACACAAGTCTCTCTCCCATAATTCC
Associated Phenotype:
Not determined