Busch Lab

ZMP

zgc:92479

Ensembl ID:
ENSDARG00000040747
ZFIN ID:
ZDB-GENE-040801-231
Description:
transmembrane 4 L6 family member 4 [Source:RefSeq peptide;Acc:NP_001003489]
Human Orthologue:
TM4SF4
Human Description:
transmembrane 4 L six family member 4 [Source:HGNC Symbol;Acc:11856]
Mouse Orthologue:
Tm4sf4
Mouse Description:
transmembrane 4 superfamily member 4 Gene [Source:MGI Symbol;Acc:MGI:2385173]

Alleles

There are 2 alleles of this gene:

Allele Name Consequence Status Availability
sa6716 Nonsense Mutation detected in F1 DNA Not yet available
sa43885 Essential Splice Site Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa6716
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000104528 Nonsense 34 198 1 5

The following transcripts of ENSDARG00000040747 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 22 (position 41095857)
Other Location(s):
Assembly Chromosome Position
GRCz10 22 38184158
GRCz11 22 38137305
KASP Assay ID:
554-5383.1 (used for ordering genotyping assays)
KASP Sequence:
TGGCCATCATCTGCGTCCTCTGCAACATCCTGCTCTTTTTCCCCAGCGGG[A/T]AAGTGGCCGATCAGAGCCAAGACATCACCGACGAAGTCTTTTACCTGGGG
Long Flanking Sequence:
CTCGGACCCTATCTCTCTTTGTCCTGATAAGTTGAATAACACAAGTTACGGAAAGGAATTTCTTTAGCATAGTCATAAATATAAAAAAAAAAGATTTACATAAAATTGATAAGTATTTGTCTATAAAATGCTTCTTGATTTAGGAATTTCTAGATATTTGGACTAGAAACAAGACGAAAGCTCAAAGTAAAGTCATTTTTTTTTCTCAGTGTAGTCATAAAGATCCTCATGTTAAGGTGAGGCCGGTGTGACGCACTGATATCTGTTAGTGTCAATTGTTAGCAGTTACTGATTTACAGACAGCAGGTATAAAGTCCTGCCTCCACTCTCCTGCTCCAGCACAGCCGAACAAACTCAACTCCCGTCGGACTGTATTTCTTCTCCCCAGCAGAGACTCAATCATGTGCTCTGGAAATTTCGCCAAGTGTCTGGGCATCACGCTCATCCCGCTGGCCATCATCTGCGTCCTCTGCAACATCCTGCTCTTTTTCCCCAGCGGG[A/T]AAGTGGCCGATCAGAGCCAAGACATCACCGACGAAGTCTTTTACCTGGGGGGAATTTTGGGATCTGGAGTGCTGGTGAGGAAATAACAACTCAGAACGCCTTCGATATTACTGTTTTAATAATAAATGCACTTGAGAAGGAGATTGTATAATACTGATATTAATAATAATAAAAAACAACAACATTATTATTCTATTATTAGCATTATTGTTATATGCTGTGTTTTTATTCCTTTTTAGCACTGAAAAAACTGATGCACTGCTAAAAATCTGTTTCGTACTTAGTGTTTTTGTTTTGTTTCTAGTCCAAATATCTAAAAGTTGACATATATGACATATTGTGTTGAGTATTTCATTAAACAAGCCTAATAATCTGCCAATGAGTAAACATTTTTGTTCCAAGATTATTTTTCTGACCCCATTGTCAGATTATTTTGCTTGTTTTATGGAAAAACCCACTTTATTCGACTCATTATTTCTGAAAACAAGACAATATTTTCT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa43885
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000104528 Essential Splice Site 89 198 None 5

The following transcripts of ENSDARG00000040747 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 22 (position 41088626)
Other Location(s):
Assembly Chromosome Position
GRCz10 22 38176927
GRCz11 22 38130074
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACCATTATCTTGGCTTGTTTCCACTTTAACGTTTAGTTCTTCTTTCCTGC[A/T]GATGTTCAGCTCTATTCTGTTTGCGGCGGCAGGAGCAGTGGGCGCTGGTT
Long Flanking Sequence:
GTTATCACTTTAACGTTTCGTTAAAAGGTCTTTGTGCTTTTGTTGTACGAATTTAACAAAATCAAATTCTTCAATGTATAAAATAGTTACGTGTTGCGAAATTCAATGTTTTACTTAGCGATTCTTTGTGATTGCCCGAACACTATTTTTCCTTCGCATTGTTTCCATTTTAACGTTTTATTAAAAGGTCTTTTTGCTTTTTTGTAAAATTTCAACAAATTTGAATTCCCGAATGCGTAAAGATGTTAATGTCTAATTCAATGTTGGACTCGACAATTTCTTGCAATTGTTTTAACACAATTTTTTGTTGTTGTTATCACTTTAACGTTTAATTAAAAGCTCTGTGTGCATTTTTTCTGCAAATTTAACAAATTCCAATGTGTAAAATAGTTACGTAAAATGTCGTGCAATGCAGTGTTTTACTTATTCACCCCCTGTATTTATTGCAACACCATTATCTTGGCTTGTTTCCACTTTAACGTTTAGTTCTTCTTTCCTGC[A/T]GATGTTCAGCTCTATTCTGTTTGCGGCGGCAGGAGCAGTGGGCGCTGGTTACTCCGTCATTGTGTCCTGTGTGGCTCTAAATCACGGACCCAAATGTTTTTTAAGCGACGGCAGCAATAACGCCACTTACCCATTCACCGACGGGTGAGTGTTTATTCACAGACCCTCAAATAAATCCAGATCCTTTGATCTAAATCGTGGTGTTTTGGTGACTGTCGCTTTACATTCAAATGAGATTGTGCTCTTTTTAAAAGAGGGCGGAGCTACAGATGCCTGAGTGTCAGCATAGTGGCAGGTTCAAAAATAAGACTGACGTCCTATGCTAATGAGGGAGAGATGGTCACTAGTGGGCGGGGCTTTCCTCCACTGATGACACATACAAAGGGAGAATGTCAATCAAAGTGTTTCTGCAGACTGATTTCATCAAGTCTGATCTCAACAAATATATTTAATTAAATGTTATCACTAGAGGCTGGTAGTAATACATAGAGAAATACATA
Associated Phenotype:
Not determined