ZMP

pdgfaa

Ensembl ID:

ENSDARG00000055505

ZFIN ID:

ZDB-GENE-030918-2

Description:

platelet-derived growth factor alpha a [Source:RefSeq peptide;Acc:NP_919407]

Human Orthologue:

PDGFA

Human Description:

platelet-derived growth factor alpha polypeptide [Source:HGNC Symbol;Acc:8799]

Mouse Orthologue:

Pdgfa

Mouse Description:

platelet derived growth factor, alpha Gene [Source:MGI Symbol;Acc:MGI:97527]

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa43858	Nonsense	Mutation detected in F1 DNA	Not yet available
sa37527	Nonsense	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa43858

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

G > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000105088	Nonsense	31	194	2	6

Genomic Location (Zv9):

Chromosome 22 (position 26685959)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	22	25984867
GRCz11	22	26004764

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

CCCCATTTTTTTGTCTTTAACAGGAAGCACCAATTCCCCGAGAGCTGATT[G/T]AGAGACTCTCTAACAGTGAGATCCACAGCATCAGCGACCTCCAGAGGATC

Long Flanking Sequence:

TAAAATCTGCTTTATGAACACGAGGCAAGTTCTAGAGTGCTACTCATGTTACAAATGAAAACAATTGAAAAAAAAAAAAAAGTCTATACATTTTGATTTTTAACCTGCAAAATGTCAAGTGGTGTAACCATCAAATAGCCAATAAAGTATTACACTTACATTCCTTAGACTTCCATACACGTGCACTTATATTCAAAGATTTCAGCATGGTTCTGATATAGACCTAATATATTTTTTAATTAATTTTGGTCCATATAAAAGTTCACTTTCTAAAAAATTAAAAACTTAAATATTGTTAAATCAAGTGTCTGACAAACACAAGGATCTAAAAGGGTTCATTCTGATTTGTGGAAATCATTTTTTACATGCTTTACACAAACTGACTTAAAACAAGCTAAAAATATGTTTAAAACAAACATATGCCAAAGGGCAAAGCTACAAATAAACAATCCCCATTTTTTTGTCTTTAACAGGAAGCACCAATTCCCCGAGAGCTGATT[G/T]AGAGACTCTCTAACAGTGAGATCCACAGCATCAGCGACCTCCAGAGGATCCTGGAAATGGACTTCCTAGGTAAAGTCTTACTGGTTTTCTTATTATTTGACAAGACCTGAGTAAATTAACTTGAGTTTGATAATTCTGAGCTTACTACACTGTAATACCCAAAGAGTTAAGGTAACTCAAACCGTTTGAGAATACCAATTGCAACAAACCATTTAAGTTCAAAAACTAATCTTAATAAGTACTGTGAACTTAATCCATTTGAGTAAATGAAGCAATTTGAGCACAGTAAAACCTAATAGATGAAGAGAACTCAAACCAACTGACTACTGTGAAACCCAATAAGTTATGGCAACTCAAACCGTTTTAGAAAAACGATTGCTGCAAACCATTAAAGTTAATGTAATGAGGTACTGTATTTAATTAACCCAATACCTACAACACTGAGTTCAAAAACTTTCAGTCAATTTTGAGTTAACTACACTCATTTCATTTGATGAAGT

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa37527

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

A > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000105088	Nonsense	143	194	4	6

Genomic Location (Zv9):

Chromosome 22 (position 26678713)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	22	25977621
GRCz11	22	25997518

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

GGCGATGCTCAGGCTGCTGCAACACCAGCAACATGCGCTGCCACCCGTCC[A/T]AAAAACACCACAGGAACGTGAAGGTGAAAATATACACATACACATCTTAC

Long Flanking Sequence:

ACCACCTTCAAATTACAGGTGTAAAACGTATCTCAACGAGGATTACCCAGGGTTAAAAGTCCAGTGTGAAAAAAAACACTAAACAAATGTATGCATGTAGGTTTAACTCCACAAATGGGCTAACCTTGTTCCAGAGCAGAGTTTCGTAACCCTGGGCAAAATGCAGTACTTAAAAAACAAATTACAGGTGTGAAAGGGTCTCAGGGTAAAAAGCAGTGGTTCGAATGACAATAACCCGGGGTTAAAAGTCCAGTGTGAAAAGCCCAATAGAGTAGTCACACAGAGATTACCAACACCCTGTGGTTTGTGTGTTTACAAGCTGTTGTGTGTGTTTAGAGGAGGCAGTGCCAGCCGTCTGTAAGACCCGTACGGTGATCTATGAGATCCCACGAAGTCAGGTGGATCCAACAGCCGCCAACTTCCTGATCTGGCCTCCGTGTGTGGAGGTGAGGCGATGCTCAGGCTGCTGCAACACCAGCAACATGCGCTGCCACCCGTCC[A/T]AAAAACACCACAGGAACGTGAAGGTGAAAATATACACATACACATCTTACTTTCTCCATACAAGTGTGTAATTTAATGTTGACATTATTCAAAATAATTCTATTCATTCAAATTATGAAAAAGCATTGTTTATTTGAATATACTCGTAAATACATTTATTCATTTTCCTTCGGCTGAGCCCATTTATTCATATATGGTTGAAGTCAGAAATATTAGCCCCCCTGAATTATTAGACCCCCTGAATTATTAGACCCCCTGTTTATTTTTTTCCCCAATTTCTGTTTAACAGAGAAAGTATTTTTTCAACACATTTTTAAACATAATAGTTTTAAAAACTCATTTCTTACAACTGATTTATTTTATCTTTGCCATGATGACAGTAAATAATATTTGACTAGATATTTTTCAAGACACTTCTATACAGTTTAAAGTGACATTTAAAGGCTTAACTAGGTTAATCAGGTTAACTAGGCAGGTTAGGGTAATTAGGCAAGTTATTG

Associated Phenotype:

Not determined