Busch Lab

ZMP

ptprc

Ensembl ID:
ENSDARG00000071437
ZFIN ID:
ZDB-GENE-050208-585
Description:
Novel protein similar to vertebrate protein tyrosine phosphatase receptor type C (PTPRC) [Source:Uni
Human Orthologue:
PTPRC
Human Description:
protein tyrosine phosphatase, receptor type, C [Source:HGNC Symbol;Acc:9666]
Mouse Orthologue:
Ptprc
Mouse Description:
protein tyrosine phosphatase, receptor type, C Gene [Source:MGI Symbol;Acc:MGI:97810]

Alleles

There are 5 alleles of this gene:

Allele Name Consequence Status Availability
sa43851 Nonsense Mutation detected in F1 DNA Not yet available
sa9795 Nonsense Available for shipment Available now
sa39373 Nonsense Mutation detected in F1 DNA Not yet available
sa39372 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa43851
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000105607 Nonsense 677 1321 21 35
ENSDART00000137111 Nonsense 249 893 7 21
ENSDART00000137873 None None 255 None 7
Genomic Location (Zv9):
Chromosome 22 (position 24723018)
Other Location(s):
Assembly Chromosome Position
GRCz10 22 22981747
GRCz11 22 22996527
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCATTCCCCGAATTTTCAACAATTACACCATCAAGGAGGCGAAGAGACCA[G/T]AAAACCAGTCCAAGAACCGCTATGTTGACATCCTGCCTTGTAAATATCAC
Long Flanking Sequence:
AAATTAGTTTGTGAAACTTCACTAAGTTAACTTATTATTTTTCACACATTTAAGTGGATTGTACATAAAACAATTAAGTTGTCCCCCCAAAAACCCTCAAGAATTGTGTTGTTTCAGCTCATTTTAAATTAATAGTTTGAACTAACTACTGGTGTGTAGTTGTGTATGGTTGAAGATGTGCAGATTATATTACATTTATTGAAATCAGATATTAAATTAAATTTTATTTAAAACAAGATTAAATTTTTGTTTTTTTTATCTCATTTAATTAATTCTTGTAGAAGTTATGTTTTAAATAATTGTTCTAATTATCAGAGTATTTTTATAACTTATTATATTTAGGACTTTCTCTAATACCAATTTATTTATTTATTCATGTTAATTATTATTTTTCTCTTTATTTATTTATTTGTTTCTTACTACTGAAAAAAAGCATGTTTTCTCCTCAGAGCATTCCCCGAATTTTCAACAATTACACCATCAAGGAGGCGAAGAGACCA[G/T]AAAACCAGTCCAAGAACCGCTATGTTGACATCCTGCCTTGTAAATATCACCTCAATATCCATAAACAGATCTGTTTACGCTGAGTTCCTTTTGCATTCTTCATAGTACATACTGTATTTCAGTCTGACAACAGCTTGTTTTGTGTATGAATTCGCAGATGATTATAATCGTGTTACTCTGTCATCTGGAAGCTATGGTGACTACATCAATGCCAGCTTTATTGAGGTACAACTCATATCATCTCTATATACCATGCTTGGTTTATATTATTTTATTCATTGTTGACATTAATTTAGGTCTTTTTAAAATGTATATTAAATACAAGTTGATATTATTTTATTATACTTACTGTAATTACATGATTTTTCAGTTGGTAAAACTTAATTATATATGTATCTAAAATTATAATATTTATAATTAACTTTTTTTTATTTCAACATATTTTTTTATCCATACAGGGTTATCAAGAGCCAAAGAAATACATTGCAGCCCAAGGTAAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa9795
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000105607 Nonsense 1059 1321 31 35
ENSDART00000137111 Nonsense 631 893 17 21
ENSDART00000137873 None None 255 None 7
Genomic Location (Zv9):
Chromosome 22 (position 24707457)
Other Location(s):
Assembly Chromosome Position
GRCz10 22 22966186
GRCz11 22 22980966
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CTCATGCTGTACCAGCAGCAARSTAAAMMAGTTGTTATGCTCACAGACTG[T/A]CAAGAGGACGGCAAGGTATGAACTCCCACARTACCAGASAACAGATAGAA
Long Flanking Sequence:
CAGTATTAGTTCCAGTAAACCCAGAAGAAAAAGATTTTCAATTGGTTGTGAATTTGTATCAGATGATTGTTATGGATATATATTTTTTGCAGATGATTATAATCGAGTGCTGTTTCGGCTGGACATTGCGGGAAACCAGACCAGCGACCCTGAGGATGACACATATTCATCAGATGAAGAAGAAGAAGAATCTAATGAATACATCAATGCTTCATTCTTAGATGTACGACTTTTGATTTTCTAGAATTTAATAATTAAATAGATTTTATATATTTGAGTTGTTGGACTAGAGAAGAAAATGTCTTTCATAATGTAAAATAATTATTAATTTGCCACATTTCCCAAGCTTAACCCATACACAAACCTTTTGATTTCCAACAGGGCTACTGGTGTCAGAAGAGTCTGATCGCAGCACAAGGGCCTTTACCAAACACAACAGCAGAGTTTCTGCTCATGCTGTACCAGCAGCAAACTAAAACAGTTGTTATGCTCACAGACTG[T/A]CAAGAGGACGGCAAGGTATGAACTCCCACAGTACCAGACAACAGATAGAAACAAATATTGCTAAAGTCAACAGATTTTACAAACAGATCACCAAATTATGCAACAAATATTGCTAAAGTCAACAGATTTTACTAACAGATCACCAAATTATGCAACAAATATTGCTAAAGTCAACAGAGTTTACTAACAGATCACCAAATTATGCAACAAATATTGCTATAGTCTACAGATTTTACTAATCAATGACCAAATAATGAACAACTCTTTCTAAAGTCAACAGATTTTACTAATAGATTGCTAAATAATTCAACAAATATTGCTAATATCAACATAATTTACTAATAGATTGTTAAATAATGCAACAACCATTTGCTAAAGTCAACAAACTTTACTAATAGATCACCAAATAATGCATGAAATATTGCTGAAGTCAACAGAATTTACTAATAGATTGCCAAATAATGCAACAACTATTGCTAAAGTCAACAGATTTTACTAAC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa39373
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000105607 Nonsense 1094 1321 32 35
ENSDART00000137111 Nonsense 666 893 18 21
ENSDART00000137873 None None 255 None 7
Genomic Location (Zv9):
Chromosome 22 (position 24706313)
Other Location(s):
Assembly Chromosome Position
GRCz10 22 22965042
GRCz11 22 22979822
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTCGGAGATATGGAAATCGAGGTGAAAAAGACAGAAAGCTTCCCAACATA[T/A]GTAAAACGTCACCTGGAAATACAATCCACAAAGGTAAGTGGAATATCTGT
Long Flanking Sequence:
AGATTTTACTAATAATCACAAAATAATGCAACAAATATTGCTGAAGTCAACAGATTTTACTAATAGATCACAAAATAATGCATGAAATATTGCTAAAGTCAACAGATTTTACTAACAGATCGCCAAATAATGCAACAGATATGGCTAAAGATTACAGATTTTACTAACTGATCATCAGATCTCTTTGTAAAAACAACATAATGATGCTTCCATCTTTCGAAAAGTCATTTTTTGGCTTAAGTGAAAATTGGCATGTTTACTTTTTCTCTCATAAAAATAGTGGGTTACTAAGTAAACATCAATGACATCAAATGTTTTGGATTTTGGCACTATTCTTGTTTTTCTGTAGCCATTTTTTGAAATTTAATTGATTAGATGTACCGGTAGGGTGACCCATCTGTATTTTTTTAGGATTTGTGCAGTCAGTATTGGGGAGATGAAAAGAAAGTGTTCGGAGATATGGAAATCGAGGTGAAAAAGACAGAAAGCTTCCCAACATA[T/A]GTAAAACGTCACCTGGAAATACAATCCACAAAGGTAAGTGGAATATCTGTCATGCTATCAACTGAAGACATGTTTTCTTCCTTGAATTAAGTCATTAATGCGTCCGAAATCAAACACTACTACTCATGTTGGTTCTACTTTTGAGTTTGACCGTATTTGCCGACCTTTAAAAAAGTATGTTCTATATAGTACAAATGTGAGTAGTATAAATTAAATTTAAACATACTACATCGACCATTTATTATTATCACATCACCTACCTCATTTACCTACCTGTGAGTCATCCGAGTACTTCTCACCTGTTTATCGAATACTATTAATTAAGACAAACTACTCAACACACATATTGTTTTCACATACAAAATTAATGTAGAATATCTTAAGTATATCATTTTAGGTGGACTGATTGATTTGTTTTTAATCTTATAATAGAAGAACGAAATCTTGGAGTTAGACCAGTACCAGTTCCTGAAATGGAAAAGCAGTGAACTTCCAGAAAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa39372
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000105607 Nonsense 1195 1321 34 35
ENSDART00000137111 Nonsense 767 893 20 21
ENSDART00000137873 None None 255 None 7
Genomic Location (Zv9):
Chromosome 22 (position 24705529)
Other Location(s):
Assembly Chromosome Position
GRCz10 22 22964258
GRCz11 22 22979038
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTGCTCATTAACAGAAAAGTTGGTTGACGTCTTCCAAGTGGTCAAAAACT[T/A]GCGCAAGGAGAGACAGGGAATGGTGGAAACATTTGTAAGTTTTAATTCTT
Long Flanking Sequence:
TCCGAGTACTTCTCACCTGTTTATCGAATACTATTAATTAAGACAAACTACTCAACACACATATTGTTTTCACATACAAAATTAATGTAGAATATCTTAAGTATATCATTTTAGGTGGACTGATTGATTTGTTTTTAATCTTATAATAGAAGAACGAAATCTTGGAGTTAGACCAGTACCAGTTCCTGAAATGGAAAAGCAGTGAACTTCCAGAAAATGCTCAGGAGTTGATAGAAATGATAAAGAACATCAGAGAGAACGGCAAATATGATAACAGCAAAAAAAACAGGAGCATCCCTATAGTAGTGCACTGCAGGTAAGGCCAATACCAGAGACTTACTTTTTCTGGATGGATCTGTGGATAGATTAAATCTATCTATCTTAATCTTGTTTTTCCAGCAATGGGTCATCGCGTACTGGACTTTTCTGTGCTTTGTGGAATCTTATGGATTGCTCATTAACAGAAAAGTTGGTTGACGTCTTCCAAGTGGTCAAAAACT[T/A]GCGCAAGGAGAGACAGGGAATGGTGGAAACATTTGTAAGTTTTAATTCTTTTTTGTAAACAGGAGTTAATTAATTTTTTATTATTATATATCAAAAATATTCATCAATAAGTATTCATTCAAATGCCCATTGTAATTTTGTGGCTATCAGAGAAGTATTGTTTTCTTGGACCACTTTCACATTCACATTTAAATTATACAAGGTTATTTCAAATTATTACAGGCTAATATAGACAATTTCAAAGAGGTGATGCAATTGGCCTATGAACATTTCCTGCTTGTTGTCAAACTATTTCATAACTGTAGTAAGAGACAATTTAATAATAATACTTTAACGTTAAAACAGCTATTATGACACATAATTTTTTAAAATTCTGAATCTATGAAAATTAAAAAAGTAAATCAGGAAATACGTTCGGACCAATGGTGTTATTAACTTGCCTTAAATGGTCTATAAAAGATTAAAATATAAAGGTATAAAAAAATTTACAGAACAGACAA
Associated Phenotype:
Not determined