ZMP
zgc:56402
Ensembl ID:
ZFIN ID:
Description:
Vesicle transport protein USE1 [Source:UniProtKB/Swiss-Prot;Acc:Q7ZTY7]
Human Orthologue:
USE1
Human Description:
unconventional SNARE in the ER 1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:30882]
Mouse Orthologue:
Use1
Mouse Description:
unconventional SNARE in the ER 1 homolog (S. cerevisiae) Gene [Source:MGI Symbol;Acc:MGI:1914273]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa15607 | Nonsense | Available for shipment | Available now |
| sa43782 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa15607
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000006927 | Nonsense | 25 | 261 | 1 | 8 |
| ENSDART00000126664 | None | None | 102 | 1 | 7 |
Genomic Location (Zv9):
Chromosome 22 (position 11189086)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 22 | 11049254 |
| GRCz11 | 22 | 11078936 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ACTGGAGATTAATTTCGTCAGATTATTGTCGCGCTGTGAATCKCTGGCTT[C/A]AGAGAAAAGAGCCGAGACAGAATGGAGACTAGARAAGGTAATAATATATG
Long Flanking Sequence:
CTAGTTCATGTTACTAGAAGAATGTGTGGAAACTGATTACCTTAAATTTCTCAAGTAACTTGTACTCACAACTCTAAGTTAATCATACACAGCCAGTGAATATGAATTATATATTTAGAATTATATAATTGTGAATTTATGCCTTTATGTTTACAAATATTGTGATAATTATACTGTATAAGAGTCATTATTTCAGTATATTAAGGCTAACACATAATTCAGGTTATTTGAAGCAAACACAACGGTATAGAAAGCTAGTTTGAACTTTTAATGTAGCCAAAATTGATAAAACATGGTCATAAAATCGTCAAACCGCCCCATTCACATGCTTAATGATTTTTAAAATGCCTCAAGGCACGGAGAAGGACTCTTCATTTGCCTGTTTGTTCCACCTTGTAATGTAAAAGTCGCGCTACTTCCGCTTTGAATGTCAAATATGGCCACGTCCAGACTGGAGATTAATTTCGTCAGATTATTGTCGCGCTGTGAATCGCTGGCTT[C/A]AGAGAAAAGAGCCGAGACAGAATGGAGACTAGAAAAGGTAATAATATATGTTTTAAAAAGCTTTATATTCCGACTGTAAAATATTCTGCATGAAAACAACACAGCAATAATACCAACGCCATGTCTAATGTGGATTACGTGTCAAAACAAGGCACGTATTATTGCATTCAAATCAATTATCTCTTTTTAAATTAATCATTTTTACTCCGCTTTTTGTTTCTTCACTTAGGACGGTATTTAAAAATGTCTATAGAAGGCAAGACACTGCAGGTGGATAGGGGTAAAACATTATTAATAATAAGTATCACCATACTTCAACAGCTGATTGATTAACTTACATCAACAAATTTATACATTTTTACAGACATTTTCAATAATGTTATGTTTGAATTCGCTCTAATCTGCATATATATGTAGAACAAAAATCTGCACCTTACTTGGATGAATATTTGGGTTTCACTACACTGTAAAAACTGATTAAAAGCAAGTAAACCAATGGC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa43782
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > G
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000006927 | Essential Splice Site | 137 | 261 | 5 | 8 |
| ENSDART00000126664 | Essential Splice Site | 93 | 102 | 6 | 7 |
Genomic Location (Zv9):
Chromosome 22 (position 11184035)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 22 | 11044203 |
| GRCz11 | 22 | 11073885 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTACTAACCCTTCTATCTTTGTCTTAATAACAGGGTGTGTCAAATTCCGG[T/G]AAGCTGTGTCTTGTATTTTAACAAACTCAACATATTTCAGAAACTGATTG
Long Flanking Sequence:
CAGCTGCAACCCAGCTGCTGGATAAGTTGGCGGTTCATTCCGCTATGGTGACCCCAGATTAGTAAAGGGACTAAACCGAAAAGAAAATGAATGAATGAATAATTTATATTTAAGCAGTAATTAAGACAGTTTTTAGTAATAATGTAATGCATTTTTCTTTTTTTAACATTTACTTTTTAAAATATCTTATTTTTTAAATCATATTATTATTATTATTATTATTTCCTTTTTAAATTGTATTAATATTAATAATAATAATGCATATTATTTAAAGGCGCCTTTCATATTATATGTTTATGTTTCCGTATTAGTCATTTTAGTACATTAGGTACATGTGAAACATTTAGATTTACATTTTCAGGTTTAATTTATTTTTACTTTGAGTAACTAAACCATCATCTTCATAACATCATTCATATATAATATTAATTGTAAAAATATATATATTTAGTACTAACCCTTCTATCTTTGTCTTAATAACAGGGTGTGTCAAATTCCGG[T/G]AAGCTGTGTCTTGTATTTTAACAAACTCAACATATTTCAGAAACTGATTGACACCTTGATCAATTATCGTCTTTATTCTTCACTTTCAGCTTTACTAGAGAACGACCTCCGACACAGGAAGTAGGTTTCACTTTCTTCAGTTCTCCGTCGAATGAGCTGCTGTTACTGGTTTCTACATCATTCCTGTTTCTCCTCTGTTTTTCAGAAGTCTTCCAGTAGACGAGCGTCAGTCGGCAGCAGAACTGGACCAAATCCTGCAGCATCATCACAACCTGCAGGAGAAACTGGCCGATGACATGCTGAATCTCGCGCGCAACCTCAAGAACAACACACTCGCCGCTCAGAACATCATCAAGCAGGACAACCAGGTGCTGTTTCTTTCTGAAAAAAAGATTTGGAGATGTATAAAATAATTGCATCTACTCACAGCAAATGATGTGGCACATTATAAAAGTGTGCATGTTTTAATTACGACATGCGTCTAGACTTCTCTTTTGTGT
Associated Phenotype:
Not determined