ZMP
crnkl1
Ensembl ID:
ZFIN ID:
Description:
crooked neck-like protein 1 [Source:RefSeq peptide;Acc:NP_957240]
Human Orthologue:
CRNKL1
Human Description:
crooked neck pre-mRNA splicing factor-like 1 (Drosophila) [Source:HGNC Symbol;Acc:15762]
Mouse Orthologues:
AC153386.1, AC156399.1, Crnkl1
Mouse Description:
Crn, crooked neck-like 1 (Drosophila) Gene [Source:MGI Symbol;Acc:MGI:1914127]
Alleles
There are 4 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa43537 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa43537
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000112689 | Essential Splice Site | 67 | 754 | 2 | 14 |
Genomic Location (Zv9):
Chromosome 20 (position 49387595)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 20 | 49274743 |
| GRCz11 | 20 | 49082676 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GATCACCGATAAAGAAGAGCTCAATGACTACAAACTGAAAAAGAGAAAGG[T/A]ATGAAATGTTGTATCACCATGTAGTATACCATGGTGTCACTATATGCATA
Long Flanking Sequence:
TAAGCTTATTTTTTTATAATGTATTTGTGTTTGTGTTCAGGTGAAGAATAAACCCCTGTAAGTTAGCATTAGCATGTAAACAACATGTAGTTCTGCTAACGTTACTTTATAATTAGTTAACTGATGTATAATGTGTATACATGTAATCAGTTGAGTTAAAGGTTGTCTTGCTTTGTAATGGTTTTGTATTAATGCTCATGTGAAGAATAAAGCTGTGAGTTAGCATTAGCTTGTAAACAACGTGAACTTGTGCCACTCTGAAAATAACAACTGTATAATGTATAGAACTATAACCAGATGGGTTAAAGATTGTCTTGTTTTGTAATGGTTTTGTGTTTGTGTTCAGGTGAAGAATAAAGCCCCTGCAGAGGTGCAGATCACCGCCGAGCAGCTGCTCAGAGAGGCCAAAGAGAGAGAGCTCGAGCTGCTGCCACCGCCACCCAAACAGAAGATCACCGATAAAGAAGAGCTCAATGACTACAAACTGAAAAAGAGAAAGG[T/A]ATGAAATGTTGTATCACCATGTAGTATACCATGGTGTCACTATATGCATATGTCATAAAGTAGTACTAAATTACTGTGCATGTACTGAAAGCTTGGTTCTGTCATGGCATATGCCTCAAAAATATACAGTAGTGTCACAATTGCTTATAGAATGTGCGCAGTGCTATCATGATGTTCAGAAAATATGGTATTGATATGGTGTGTAGATTATAAAAGATGATATCGCTATGGTTTAAATGTATTATTTTATTATGGTAAACCTCTAGAAAACATGGGCATTATCACAGTGCATATTCAGAAAACTCAGAGGATATGCAATGTCTTGTTGGGTTTATAGTTGACCAGAAGACAGTTTATATATGTATATAAAGTGGAAGTCTGCCTGTGTTTTATGGACTGCCGCTGTATGAACATTTCAAGAACGTATAAAGCATCCAGGTGTAACGCTTCTCTTCCTGAAGACGCAAATCACTCAGGCGGACACAGAGAACTGCGTTCTG
Associated Phenotype:
Not determined