ZMP
tram2
Ensembl ID:
ZFIN ID:
Description:
translocating chain-associated membrane protein 2 isoform 2 [Source:RefSeq peptide;Acc:NP_998236]
Human Orthologue:
TRAM2
Human Description:
translocation associated membrane protein 2 [Source:HGNC Symbol;Acc:16855]
Mouse Orthologue:
Tram2
Mouse Description:
translocating chain-associating membrane protein 2 Gene [Source:MGI Symbol;Acc:MGI:1924817]
Alleles
There are 2 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa23807 | Nonsense | Available for shipment | Available now |
sa43532 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa23807
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000043938 | Nonsense | 10 | 371 | 1 | 11 |
Genomic Location (Zv9):
Chromosome 20 (position 47841280)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 20 | 47639283 |
GRCz11 | 20 | 48116588 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGAAAGTCGGGAACTTGTAAAATGGCTTTTCGCAGGAGAAACAAGAGTTA[T/A]CCCTTCTTCAGCCAAGAGTTTCTCATTCAGAATCACGCGGACATTGTCTT
Long Flanking Sequence:
TGATCAACAAGAACCAATCACAGTAGAGTGTGATTTTAGAAAAATGAACACAATGAATTATATAACCGATTTAATCGAGAACTGTAAGCGATTACATTTACTATTCAATATAGAAATACATTTTTATAATAATATGAAAAGAATACATGATATATTGTCCAATTAATTAATACAGTTTTAGGCTACGTTACCAGATTTATGGTAAAGACGAATGTTTAATGAATTTGACTAAAGATGTATTAGTATTATTATAACTAACTTATTTTACTAATTATGATTGTAATGTTACAAAAATTGCACTCATATTGGTCGGTCCACGCATTCATTCATAACACTAACAGCGCATGCGCTTTAGCTTTAATTCGTGGCTAAAGCGCGCATGCGCAGTGCGCTTGGAGAAGTTTGGAGTGATTCGTGGAAGTTTTAGATTTGGAGGAAAAAAAGCACAGCTGAAAGTCGGGAACTTGTAAAATGGCTTTTCGCAGGAGAAACAAGAGTTA[T/A]CCCTTCTTCAGCCAAGAGTTTCTCATTCAGAATCACGCGGACATTGTCTTCAGTTTGGTGATTTTCATTTTGATTGGGCTGATGTTTGAGGTGAGTTCAAGAGTTGTGGATCTTCTTCTTCTCCGAGTCTTTGCCAGCTGTTTTTCTGTCTGTCTGCCTATCTCAACGCGTTTAAATACAAACTAAACACTCAGTTTTAAAGCCAACAACGAGCACAAACACTATTACACAAAACCTACTTTTATTAGACTCAAATCACATCATATATTCATGTTTTTTTGTGTGTTTTTTTTTTTTTTTTTTTTTGTAAAAGTAAGTGTCAGACACGCTTATTTACATTAAAAACACGACACCACCATCTCTTTGGTCGAGCTTTTAAAATAAAACGTAGTGTTGTAAGGTACATTGAAAACACTGTCGCCATCACCTGGGCCCTGACGTCTGCAGTCTGATGAGGAGGAAGAAACTCCACGTAAACTCCAGAAAACATTGTTTATTTA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa43532
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000043938 | Essential Splice Site | 292 | 371 | 9 | 11 |
Genomic Location (Zv9):
Chromosome 20 (position 47856907)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 20 | 47655132 |
GRCz11 | 20 | 48132438 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACCAGACTCTTGATTTGGAGACGGGAAACTTCAACACTCTGTCCATCAGG[T/C]GAGACTTAGAATTTTTTTTATTTTTCAAAGTAGCATTTAGCATTAAACAT
Long Flanking Sequence:
GAACATGCTAACTCCACACTGAAATGCCAACTGAAACAGCAAGAAGTCACTGGTTTGAGCCTCCTGCCCACTGTGCCACACCCACTGTGCCACTGTGCTGCCCTAGTCTTATACAATCTTTATCTTTTAGTCTTTAATAAGCAATCTATTCTTTGCGGATACACGTGTTGCGATATCGATGCTCAAACAATATATTGTTCCTCTCTAAATGAAAGAAATTACATTTTAAAATGTATTCTAATAGAAAGCAATTCATTATAGCTGCACTAATATTTCACAATATTGCAGACTTTCCTGTGTTTTGGATCAGAGAAGTGTCGACACATGAGGCTTACGCGTGTGCTTGTGTTTGTAGGTTTGAGATGTGGTCTGTGGGCTTTGTTCTGACTCGGATGATCACTCTGACGCTCATGTTTTTGGCCGTTGGCTTTGGTTTGGCTCGTTCTGAAAACCAGACTCTTGATTTGGAGACGGGAAACTTCAACACTCTGTCCATCAGG[T/C]GAGACTTAGAATTTTTTTTATTTTTCAAAGTAGCATTTAGCATTAAACATGTTGGTAAACAGTTTAAAAACAATCTTGCAGGATAATCTTGGTTAAAATGACCATATTTAAAGGCCACCTGTTATGCACAATCAGCTTTTGTAAAATATTTGGATGGAAATGTCTGTAGGCACTGCTGTATTAAGCCTGGTTTATACTTCTGCGTCAAGTGACCAGCGTAACTCATGGCGCAGGCAACGCGCGTGGCTGTGCATTTATACTTCTGCGCGCTGTCTCCGTTGGTCTGCATTAACACTTCCGAAACGCTAGTTGGCAGTAAGGTGTAAATGTTCCTCTGTGTCGAGTTTCTTCGCTGCTGTTTTGCTTTTCCTTAACACTTCCTGGTTGTAGAAGTGACTCAAACTCGCTCATTTTGAGGCAGGAACCGGCGGACGTGCAACAACTTTAACTATGAGGTAAACACAAAACAAAACTTTCCATCCGGAGCTCCTTCACGGGAC
Associated Phenotype:
Not determined