Busch Lab

ZMP

ncoa1

Ensembl ID:
ENSDARG00000018257
ZFIN ID:
ZDB-GENE-041001-175
Description:
Novel protein similar to vertebrate nuclear receptor coactivator 1 (NCOA1) [Source:UniProtKB/TrEMBL;
Human Orthologue:
NCOA1
Human Description:
nuclear receptor coactivator 1 [Source:HGNC Symbol;Acc:7668]
Mouse Orthologue:
Ncoa1
Mouse Description:
nuclear receptor coactivator 1 Gene [Source:MGI Symbol;Acc:MGI:1276523]

Alleles

There are 5 alleles of this gene:

Allele Name Consequence Status Availability
sa23769 Nonsense Available for shipment Available now
sa17222 Nonsense Available for shipment Available now
sa12342 Essential Splice Site Available for shipment Available now

Mutation Details

Allele Name:
sa23769
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000045948 Nonsense 440 1367 9 27
ENSDART00000130513 Nonsense 436 738 9 10
ENSDART00000147515 None None 466 None 7
Genomic Location (Zv9):
Chromosome 20 (position 36798236)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 36870749
GRCz11 20 36773628
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CGCCCACTCCACCAGGCTACCTGACGCCCAGCCGCGTCGGGCCGTCACAG[C/T]AGGTCAGCAGCCCCTCTCCACTAGGCAGCCCTCTTACAGCAACCCCTACC
Long Flanking Sequence:
TTTAAATAAGTGGAGAATAAAGTAAACAATAAAAATTCTTAAGTTTTATATATACAGTATATACACACAGTTAGGTACATAAATGTTTAGACATCGACAGAATTCTAACATTTTTGGCTCAGTACACTAACACAATGGATTTTAAATGAAACTAACAAGATTTTTAACTTTAAAGGTATTTACATCGAAATCAGGTGAATGCTGTAGGATTACTACAGTTTGCATATGTGTCACACTTGTGTCACACTTCTGAATGGGTACATAGCTAATAACTATTTTTTAAATTGTGTTGCAGGGAACACAACACTGCTAGCTCTCAGGAAAACACTACCCCCAGCCTTTCGTCTCCTGCTGCTCCCCCTTCCCGCTCGCCTGCCCTGCAACCCTCCAGTGACCTCAGCATCCATCTCAACAACACCAACGGCACCTGTGCCACTCCCGGCCCCCTCACGCCCACTCCACCAGGCTACCTGACGCCCAGCCGCGTCGGGCCGTCACAG[C/T]AGGTCAGCAGCCCCTCTCCACTAGGCAGCCCTCTTACAGCAACCCCTACCTCATTCATGTCGCCCCGACCTCCACGGGGCAGCCCGGGCCTGGCCAGCAGCCCACGAGTGCCCGGACATCCATTCTCCCCCTCAACGCCCAGCATCCACTCGCCAGCTGGTGGACTAACCAGGCAGCAATCTGGCGGCGATGGTGTTGGTTTCTCGCTCCCTTCTCCTTTGCCCCCCAGACAGACTCCAACTCCCAGCAGCTCGCCGGCAAGGCAGCCTCCTGCCAAACCGCCAGAAGCATCCAACGATGAGCCTAAAAGCAATCAAGTCGGCAACCCCAAGCTCAGCCAGCTTTTAGATGGCGCAAGCGCCCCCGAACAAGACTCACAACCCCGTCCTTCACCCACGTCCCAATGCCCGGCCTCGCACAGCAGCCTGACAGAGCGGCATAAGATTCTGCATCGGCTGCTTCAGGACAATAGCCCTGCAGATGCGGGCAAGGAGCCGGAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa17222
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000045948 Nonsense 856 1367 16 27
ENSDART00000130513 None None 738 None 10
ENSDART00000147515 Nonsense 6 466 1 7
Genomic Location (Zv9):
Chromosome 20 (position 36808037)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 36880550
GRCz11 20 36783429
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GACCATCTCTGTCATTTGTGTTTKTCTCTGAGCAGGCAKTGTGTCCCGTG[T/A]CCGCTGGATGAGATGCTRTGTCCTCCCACCACCCCAGAGGGAYGAAACGA
Long Flanking Sequence:
GCAGAGTTGGATTCAAACTGCAGGGCAGCAGCCCTCCAGGAACTAAATTTGACACCACTGAGCTAGGCGTTCCTTACAATTAAAGCTAGCAAATGCTAATGTTGTCTTTTTTTAATGTGTTGAACATCAGTTATGTTAAAATCTTATTTTTCATGACTCTAATATACGTTTGTCACTTTGATGTATAAAACAGTTAATGAGAAGAAAAGATACAAAGAACATTGTTGTACACCTACTTTGATTAGCATCTGAAAGTAAGTGTTGCTGTTCTGAAAGTGTTGGCTGGTAAAATGTTTTGTCTGGTCCCTCAAGAATCAATTACCACTATAAACATCACCCGGGTCGGAAGGAAACAGATGTGTGCTTTCACCCAAATTCTACTAAAAGTGTTAGCCAAATCAGCTAGAGTACCTGTCAAATTCTCCATCTCCAGTAGCAGTCAGAATCTCAGACCATCTCTGTCATTTGTGTTTGTCTCTGAGCAGGCAGTGTGTCCCGTG[T/A]CCGCTGGATGAGATGCTGTGTCCTCCCACCACCCCAGAGGGACGAAACGACGAGAAGGCCCTGCTGGAGCAACTGGTCACTTTCTTGAGCCACACTGACGAGAGCGAGCTGGCAGAGCTGGACCGAGCGCTGGGCATCGATAAGATTGTTCAAGTTCGTATCATATTTTCGTCAATGTTCTTTGCTGACCTTTTATTGTATAGTTTTGACACAATAATTAACTTTTGTTTCATATTTGCAGGAATTCACTAAATACCAGTTAGCAAGATTAAATAGTGGGTGTAATGAGTTAAAGTTAAAGGTGCAGTAGGTGATCTGCCTACATGCTATCCATTAGCATAATATCTTTAAATATCATTAAATCTTTAAAAATCATTTAAGATGACCCACTTGATCATGTCATTCACCAGTTAGAAAACTTTATAGTACTTTATAATACTACAATTCTGAACTGAAAACTGTATTGAATCTAGCACGTTTTCAGTTGTGTAGCAAGCAAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa12342
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > G
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000045948 Essential Splice Site 1161 1367 None 27
ENSDART00000130513 None None 738 None 10
ENSDART00000147515 Essential Splice Site 291 466 None 7
Genomic Location (Zv9):
Chromosome 20 (position 36812009)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 36884522
GRCz11 20 36787401
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GTGAACACTCCTGTTCAACAGGGGCTTTTCCAGCAATTTGGGGGGTCTGG[T/G]ATGTGTCATTTGTATGTTTTATTTATTTTTTAAAAGAGAGCAACCMTTTT
Long Flanking Sequence:
CCTATGCTTCTGTGCATTTTCACACTCTTTCCCTCTTTTTCCACATGTTTTTTGTGTGATTCTGACAGTCTTGTGATTTCTCCATGTGTCTCTCAGCCTCCGCTGAATGCTCAAATGATGGCCCAGCGGCAGCGTGAGGTCTACAGTTACCAGCACCGCCAGCGGCAGCTTCTGCAGCAAAAGGTCATGCTAATGAGGCAGGGAATAAACACAGGGCCCCTGGGGGCTCAGAGACTTCCTAAGGGCCCCCAGCAGCAGCAGCAGCCGCCACCGCAGCAGCAGCAGCAATTTGGCTTTCCTCCAGGATACAACGCTGTGCCTGGAAACACCCCTACCTCCCCGAGCCACTTTAACCCCATGGGAGGACCTCTGGACCCAAAGCTGTCCGTCAGGGCAGGCCTGGGGAACCAAGGCATTATGGGAGCCATTCAAGGGCAGTTTGGGGGGCCTGTGAACACTCCTGTTCAACAGGGGCTTTTCCAGCAATTTGGGGGGTCTGG[T/G]ATGTGTCATTTGTATGTTTTATTTATTTTTTAAAAGAGAGCAACCATTTTCATTTAGTTTATTTGATGTAGTAGAGTAACTAAACTAAAACAGAAAAAATAATAACTTTATTGACCTATTGAAAAAAAATAAAACTATTAATTATTATGTATTTAATTATGTATTTAACTTAAACCATAAAAATTGTTACTAAAATAAATATTTTAATTTAGCTTAATAAATAATTAAGAAATATTATTTATAACTAAAAAAAAACATTTAAATAAATGTATTTATTATTTTATTTAACCTAAATAATTTTTCAGTTAGTTTACGTAATTGGAAAAAAAACCTAATTATTTAAAAACACTTTACAATTATATAAAATTATATAAACGTACAGAATTACTAAAACTATTATTTCAAATTAAAATGCAAAGTGTACAAATAAACACTGAAAAATGTCATTTAAAAATTTTAATATATTTTATTAATGCTAAATATCACACTGATTATGATAT
Associated Phenotype:
Not determined