ZMP
hnrnpu
Ensembl ID:
ZFIN ID:
Description:
heterogeneous nuclear ribonucleoprotein U isoform 2 [Source:RefSeq peptide;Acc:NP_001028767]
Human Orthologue:
HNRNPU
Human Description:
heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) [Source:HGNC Symbol;Acc:504
Mouse Orthologue:
Hnrnpu
Mouse Description:
heterogeneous nuclear ribonucleoprotein U Gene [Source:MGI Symbol;Acc:MGI:1858195]
Alleles
There are 3 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa23760 | Nonsense | Available for shipment | Available now |
sa43492 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
sa17952 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa23760
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000122696 | Nonsense | 28 | 796 | 1 | 13 |
The following transcripts of ENSDARG00000004735 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 20 (position 35083472)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 20 | 35155985 |
GRCz11 | 20 | 35058864 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GAACGAGCTGAAGGACGAGCTAAAGAAGCGGCAGCTCTCTGACAAGGGGT[T/A]GAAGGCCGAGCTCATGGAGCGTCTGCAGGCCGCGCTCGACGCAGAGGCCC
Long Flanking Sequence:
TAATATGCTTGAATTAAACGTATTGAATTTTTTGTTAATTCCTTTGTGTACTTTTTTTATGTATAACTCTGTATTCCCGTTTAAATGAATGAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAAAAAGAATAATAAACACCCGAATTCATCTACCAAAATGGGGGCATGTTTAAAAGTCGAGGAGGATCATTTGTGCTGGACACGCCCATGTTTCCTCGGCACAGTAGATTTGGGAGGGGTCTGAGTACCTAAGGCGCCATTGAATTGTTTTGCCGGTGGACAGACGCAGAATCACCGCGGCTGTGTGCAACTCACAGAAGCGAAGCGGCCGTCGGCTCCCCTGCATTGCTATATTCAAACAACCGAGTCTCTCTGTTTTTATTAGACCATCTACGCTAAATCGACAAGATGAGTGAAATCAACGTGAAAAAGCTTAAGGTGAACGAGCTGAAGGACGAGCTAAAGAAGCGGCAGCTCTCTGACAAGGGGT[T/A]GAAGGCCGAGCTCATGGAGCGTCTGCAGGCCGCGCTCGACGCAGAGGCCCAGGCCCAAGAGGAAGAAACGACCGCGCCAGGGACTACAGAAGGTAGTAAGGTAGGAAACGATGCCGATGGAAACGGCGTTGCAGCCGAACAAGAAGGTACGGGTGAAGAAGAGCCGGAGGGGGAAAACATGGAGGCCGAGGAGCAGAATGGGGAAGGAGATGAAGCCGCCGGTCAGGACGACGAAATGGGAGAGGAGGAGGAGGAGGACGACGACGACGACGACGCCGGGGAGGAAATAGACAAAGCCTTAGACGATGAAGATGATGAAGAAGACGATATCATTGACAAAATCGACGTTGAAGACGGTGAGCTTTAATCTCATCCATTAGAGGGTGAGTTTTTTTGGTGTAAAAAGCGGTTTTCTGGACGCGGGAGGATCGAATTCACGTGCGCATTGAAGCCGGTGAGATCATCGTTTAGCATAGGTGGCTAATGGCTAACCGGGAGCT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa43492
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000122696 | Essential Splice Site | 209 | 796 | 3 | 13 |
The following transcripts of ENSDARG00000004735 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 20 (position 35087407)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 20 | 35159920 |
GRCz11 | 20 | 35062799 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GGAGGAAGTGGATGAAGAGTTTGATGACACCCTGGTCTGCTTGGATCCAT[G/A]TGGGTGTTTTTTTTTTTTTTATATGTGAAATGTTCTGACCAGGAGTATTA
Long Flanking Sequence:
GCAATTTCTCTGTAATTGGGCTTTGCATTTTACCTTTTTTAACAGACAAGCATTCAATATTAGTGATGTATACATATTAGCTTGATTTGTCCTTTCCAAAAAAAGATGTGGATGTAGATGAATAACCTTAGACCTTTTCATATTGTAATTTGATTAAGAAAGGTCACAATCCTCTCCACATAGGAAACATATGACGTTCACTTTCAGTTTTCTTTCAGGCTTCTTCTCGAGGTACACTGGTAAGCAATGATGGTAAATTTTGCATTAAAACAAAATGAATTCATCAATGTAAGGTAAACTAAATTGACTGATGCTGCTCTGGCTGTGATGGAGGACCTCACCTCGACGTGGGAAGCATGCCATTCCATCACTCCCCAATTTTTCTGATTCACTCATTGCATTAATGGCATTTTGCCTCTCTTTCAGGACCAAGTCTCCTCAGCCGCCTTTGGAGGAAGTGGATGAAGAGTTTGATGACACCCTGGTCTGCTTGGATCCAT[G/A]TGGGTGTTTTTTTTTTTTTTATATGTGAAATGTTCTGACCAGGAGTATTAAATTGTTAGAAACTGTTCAAAGTTAGACTAACAAATTTGTTTATTGGTTCTAGACAATTGTGACCTTCACTTCAAAGTGTCCCGGAACCGTTACAGTGCCTCCTCTCTTACCATGGAGAGTTTTGCTCACCTTTGGGCAGGTGGCCGTGCATCTTATGGTGTAAACAAGGGCAAAGTCTGCTTTGAAATGAAGGTGAGGCCTACAGCTTTTGAATTAGGACTTCATAGGAGTGTAAGAAACTCATATTATGGTATTATAAGATCACCATAAAAGCTGCTGTTTATTTGGTGAAGATAAACAAGTGTTCTTTTTATTTTAATGTTTCTGCCATCTCTTGTAGAAAAAAAATCTAGTTTTGTTTTAAAGCAGAAAGTGTTTGCATGTTGTTCCTCGCTTTTTCTTGAGTTGCAGTCCCACAGTTTTTTTTTTATTTTTTTTTTATTTTTTAT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa17952
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000122696 | Nonsense | 613 | 796 | 10 | 13 |
The following transcripts of ENSDARG00000004735 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 20 (position 35090116)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 20 | 35162629 |
GRCz11 | 20 | 35065508 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CAGAGAAGAAGCCCAACCAGGGACCCCCAACTCCCAAACGGGGATCCCGC[C/T]GAGGMAGAGGGCAAAAGAACCAGTTCAACAGGANNNNNNNNNGTGGTGGT
Long Flanking Sequence:
TTGCTGCCCGCAAAAAAAGACACTATATTTTGGACCAGACGAACGTCTCTTCAGCAGCCCAAAGAAGGAAGATGTGTCTGTTTGCTGGTTTCCAGCGCAAAGCCGTGGTGGTCTTTCCCACAGATGAGAACTTAAAGGAGAGAGCGCAGAAGAAGGCAGAAGCGGATGGTAAAGATATACCCGAGCACGCCCTACTCAAAATGAAAGGTGAGACATGGTGTCATTTTTCTGTTGCGTTGTAAAACCAGCATGTTCTTAATGAATTCAAAACCCTGACAGCCAAAATATGAATATCAGGATAAAGAAAAATTGTTGTTCTCTGCACAGCTCTCTACACGCTTCCAGAACAAGGGGACTGCTTTTCAGAGGTCACCTATGTTGAGCTGCAGAAGGACGAGGCCTCCAAGCTTTTGGAGAAGTACAAGGAAGAGAGTAAGAATGCTTTGCCTCCAGAGAAGAAGCCCAACCAGGGACCCCCAACTCCCAAACGGGGATCCCGC[C/T]GAGGAAGAGGGCAAAAGAACCAGTTCAACAGGAGTGGTGGTGGTGGTGGTGGTGGTGGTCAAGGAAACCGTGGAGGCAGGGGTGGATTCCAGCCCCGAGGAAACTACAGAGCGTGTAAGTAGAGTTGTCTTCAGTCTGTCTTTGTAACATCTGTTTATGTATTTATTGTTGAAATTTGTTGAGGAATAAGGAAATGATTTGCCCTTTCCCATTTTGTTTTTGTATATTTAAATGGCTTTATGTATTTTGCATTCGCAGGGTCTTTAATTTTAAAAGCAAAATTTTATCGGGCCAACATCCAATCTCCAACAATCCATCTTAATAAAATCAGGGAAAGAACTAAACAATTACACAGTTTCTCATCATCATAATACAGAAATGTATCCCTTTACGTTATCTTCCATTCATACAAAAACTATATACTAAAGGGGAGTAGACATATTTATAAATGAACATGAAACTTGGGGTTTTTTAACAGAAATGTATTAGGTTGAATACAA
Associated Phenotype:
Not determined