Busch Lab

ZMP

sod2

Ensembl ID:
ENSDARG00000042644
ZFIN ID:
ZDB-GENE-030131-7742
Description:
superoxide dismutase [Source:RefSeq peptide;Acc:NP_956270]
Human Orthologue:
SOD2
Human Description:
superoxide dismutase 2, mitochondrial [Source:HGNC Symbol;Acc:11180]
Mouse Orthologue:
Sod2
Mouse Description:
superoxide dismutase 2, mitochondrial Gene [Source:MGI Symbol;Acc:MGI:98352]

Alleles

There are 3 alleles of this gene:

Allele Name Consequence Status Availability
sa37068 Nonsense Mutation detected in F1 DNA Not yet available
sa43471 Nonsense Mutation detected in F1 DNA Not yet available
sa43472 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa37068
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000062556 Nonsense 71 224 2 5
Genomic Location (Zv9):
Chromosome 20 (position 30966633)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 31037846
GRCz11 20 30940725
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AAGCACCATGCAACATATGTCAACAACCTCAATGTCACAGAGGAGAAATA[T/A]CAAGAGGCTCTGGCCAAGGGTGAGAACAAACCAGATTGCTATTCCTTATG
Long Flanking Sequence:
GATGCCAAGGACACTTATTAGATCTTGATAGATTACTAATTTTAAAATATAAATGCACTCATATTTATATATAAATCTACTTTATTTGGTCTAAGGGGAAAGACTAAGACTTTTTACAATATTTGCTAAATGTTAATCAAAAATGATATCCCCCTTTTTTAAACCTAGTTTGAAACTTCTGATCATGTGACTTTCCATGCAGCAGTGATCCAGTGTACTCATCACAGTAATCCAACATAACCTGACAATTTTTTGTCTGTTTGTAGCAATATTGTTTTCAAAACATAAATATATTTCTTTGTTGCTGTCAACAATAGGTGCGCTGCAACCTTCAACCCCCTCTTAGGTGCTGTGACCTCCAGACAGAAGCACGCTCTCCCTGACCTCACATATGACTATGGTGCACTTGAGCCTCACATCTGTGCTGAGATTATGCAGCTTCATCACAGCAAGCACCATGCAACATATGTCAACAACCTCAATGTCACAGAGGAGAAATA[T/A]CAAGAGGCTCTGGCCAAGGGTGAGAACAAACCAGATTGCTATTCCTTATGTTTGGTGGACACAAATTGTTATTTCATTTTATACACACCCTTCTATCGTTGTCTACAGTGGTATTCTTAGTAAAAATCACATTGCATATTATCAACACTTATGTTGGGCTTTCATATTTCATCTGGATTGTGTGTCACGCTAGCAACTTCATCGATGTGCCAAACAGATATCCACATCACGTGAACACACACACATACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACATATACGCTGCAGCGTATGCATGCGTCTAAGCTCCAGCAGTCAGCGGGTGCTTTGAGCATAAAACCCCAGAGAGCAGTGAACGTCAGACAGTTTATTAAGGATGTACCGATGGGTCGCGTCTCACTATAGTTAAACATGATATTTAATTACTTTTATCTCTATCTAAC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa43471
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000062556 Nonsense 192 224 5 5
Genomic Location (Zv9):
Chromosome 20 (position 30973123)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 31044336
GRCz11 20 30947215
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CAAGGTCTCATCCCACTGCTTGGGATAGATGTCTGGGAACATGCGTACTA[T/A]CTCCAGTACAAGAATGTTAGACCGGACTATGTTAAAGCCATCTGGAATGT
Long Flanking Sequence:
ACCACTAACTTATCCAGCATATGTTTTACACAATGGATGCCCTTTCAGTTGCTACACCATTACTGGGAAACATCCATACACTCTCATTCATACACATACACTACAGAAAATTTAGCTGACCCAATTCACCTGTACTGCATGTCTTTGGACTTTGGGGGGAAACCAGAGGAAACCCACACAAACACATGGAGAACATGCAAACTACACACAGAAGGGCCAACTGACAGGCTTGAACCAGCGACCTTCTTGCTGTGAGGCAATTGTGCTACCCACTGCGCCACCGTGACGCCCTAAAAAGTAATATTGTATAGTAATAAATTATTGTTAATTTTAAATAAAACAATTATTAAAGTCATATTGTGATTAACCCCACTTTGAAAGATGTCTGCTGACTGTTATAGTGGTTAAAGTATTTTAGATTTTAATATATTCTGTTTTCCATTTTAAACTCAAGGTCTCATCCCACTGCTTGGGATAGATGTCTGGGAACATGCGTACTA[T/A]CTCCAGTACAAGAATGTTAGACCGGACTATGTTAAAGCCATCTGGAATGTTGTAAACTGGGAGAATGTCAGCGAGCGTTTCCAAGCTGCCAAGAAATAAATAAATTGCACCACACTTGGGAGAGAAAAGAGAGCAACTGAGTGTCTATTTTGTACTTTCGAAGCGCACAATTAATCAGACCACGATACAGCTATCAAACAAAACTGAGGCTATTGTTTTTGACAAGCTATAATCCATACAGAACTGTGCACTGTAATGCGTAGTTTGCATTGAGTTATTGATGTACGATAATGCTTTCAGTGTATTCAAATTAAAAGGTTATTTGAACAGTCCATATGTGTGGTGTTTTCATGATTATTTTGTCAAACTCAATATTTATAATTTCGGGTCATTATCACTATAAGGTGCCTTTGATGTGCAAAAAGATTGATCAGTCCTATCTAAACATAATGCAAAATAATGAAATTCTGAAGTTTTAATATAATTGGTTAAACCTTTAC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa43472
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000062556 Nonsense 194 224 5 5
Genomic Location (Zv9):
Chromosome 20 (position 30973127)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 31044340
GRCz11 20 30947219
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTCTCATCCCACTGCTTGGGATAGATGTCTGGGAACATGCGTACTATCTC[C/T]AGTACAAGAATGTTAGACCGGACTATGTTAAAGCCATCTGGAATGTTGTA
Long Flanking Sequence:
CTAACTTATCCAGCATATGTTTTACACAATGGATGCCCTTTCAGTTGCTACACCATTACTGGGAAACATCCATACACTCTCATTCATACACATACACTACAGAAAATTTAGCTGACCCAATTCACCTGTACTGCATGTCTTTGGACTTTGGGGGGAAACCAGAGGAAACCCACACAAACACATGGAGAACATGCAAACTACACACAGAAGGGCCAACTGACAGGCTTGAACCAGCGACCTTCTTGCTGTGAGGCAATTGTGCTACCCACTGCGCCACCGTGACGCCCTAAAAAGTAATATTGTATAGTAATAAATTATTGTTAATTTTAAATAAAACAATTATTAAAGTCATATTGTGATTAACCCCACTTTGAAAGATGTCTGCTGACTGTTATAGTGGTTAAAGTATTTTAGATTTTAATATATTCTGTTTTCCATTTTAAACTCAAGGTCTCATCCCACTGCTTGGGATAGATGTCTGGGAACATGCGTACTATCTC[C/T]AGTACAAGAATGTTAGACCGGACTATGTTAAAGCCATCTGGAATGTTGTAAACTGGGAGAATGTCAGCGAGCGTTTCCAAGCTGCCAAGAAATAAATAAATTGCACCACACTTGGGAGAGAAAAGAGAGCAACTGAGTGTCTATTTTGTACTTTCGAAGCGCACAATTAATCAGACCACGATACAGCTATCAAACAAAACTGAGGCTATTGTTTTTGACAAGCTATAATCCATACAGAACTGTGCACTGTAATGCGTAGTTTGCATTGAGTTATTGATGTACGATAATGCTTTCAGTGTATTCAAATTAAAAGGTTATTTGAACAGTCCATATGTGTGGTGTTTTCATGATTATTTTGTCAAACTCAATATTTATAATTTCGGGTCATTATCACTATAAGGTGCCTTTGATGTGCAAAAAGATTGATCAGTCCTATCTAAACATAATGCAAAATAATGAAATTCTGAAGTTTTAATATAATTGGTTAAACCTTTACAAAC
Associated Phenotype:
Not determined