ZMP

syne1a

Ensembl ID:

ENSDARG00000089890

ZFIN ID:

ZDB-GENE-030131-4172

Description:

Novel protein similar to vertebrate spectrin repeat containing, nuclear envelope 1 (SYNE1) [Source:U

Human Orthologue:

ACTN4

Human Description:

actinin, alpha 4 [Source:HGNC Symbol;Acc:166]

Mouse Orthologue:

Actn4

Mouse Description:

actinin alpha 4 Gene [Source:MGI Symbol;Acc:MGI:1890773]

Alleles

There are 7 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa17206	Nonsense	Available for shipment	Available now
sa32292	Essential Splice Site	Available for shipment	Available now

Mutation Details

Allele Name:

sa17206

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

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Mutation:

T > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000063385	Nonsense	479	1551	14	35
ENSDART00000135213	Nonsense	466	1277	12	28

Genomic Location (Zv9):

Chromosome 20 (position 26226958)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	20	26298261
GRCz11	20	26197351

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

TTTGTTTGTGCAGGAGATCTTAAGGCTTCTTGAAAGACACAAACAGACCT[T/A]GCAGTTAATACACCGMGACAGATGTGTTAATAATATGCCTATTCCCACAG

Long Flanking Sequence:

AGTTGGCGGTTCATTCCGTTGTAGCGACCCCGGGTTTATAAAGGGACTAAGCCGAAAAAGAAAATAAATGAATGAATTAAAATAATTTAAAATAATAAAATAAAATAAAACACACTATGGGAGAGCACACAAATTCAAAGAGTTTTTTTTTTTCCGCAGCTCTTGGATTGGCATCTTCAGCTGGACAGCGGTTTGCCACATCCACTGGGGGAGGTCGGTGTGTGGTTACATCAGGCAGAGGAGATTCTGCGAGAGGAACTGATCCCTCAACAAGCCCACGATGAGACCGCCAAAGCTATTCACAAAAAACGACTGCGTGACCAGGTCAAGCATGATTAAAAACTCTCTGTTTCTCTGTATGAATGCTTATGGCGTTGTGGAGAAAGCATGAATGGAAATCTATTAATTAGTTACAAACCTCAGCTTAAAAGTAATCCTGCATACTCTGTGTTTGTTTGTGCAGGAGATCTTAAGGCTTCTTGAAAGACACAAACAGACCT[T/A]GCAGTTAATACACCGAGACAGATGTGTTAATAATATGCCTATTCCCACAGAACAACTGCAAGACATGGCAGAGCGGTAAACATTATAATATATCAAATACTAATAATGATTATATATTATATTATATTATATTATATTATATTATATTATATTATATTATATTATATTATATTATATTATATTATATTATATTATATTATATTATTTGAACTGCTTTCAGATTACACTACATATCTACCTCTTCACACATTCACTTGAGCAAACTGGAATTCTGGGAGTCGAAATACAGCATGCTGGCATTTTTAACACTGGCTGAGTCCAAACTGAAATCCTGGATCATTAAATACGGCCGACTGGAGTCAATGGAGCTTCTGCTACAAAGCTATGGTGTAAGTTTAATCCTAAATAGATTACACATAATTACTATTTATTTAAAATGATAAATTATTATTTTAGAATAACTTGTTATAGCCCTCATTTCTTATTGAAATTTAATAAAT

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa32292

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC

Mutation:

T > C

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000063385	Essential Splice Site	1290	1551	None	35
ENSDART00000135213	None	1277	1277	None	28

Genomic Location (Zv9):

Chromosome 20 (position 26243430)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	20	26314733
GRCz11	20	26213823

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

AGGTAATTTCTTTAAAGAAGACCGGGCAGCTCAAGAGAAACACCTGCAGG[T/C]GAGGCTTTTAGCACAATAATGGTATTCATACATTTGACCTGCCGTGTTGT

Long Flanking Sequence:

GCTATCTACAGGCTTACTCTTTTATGACATTTGGTCTGATGATATTTTGCATGCTTAAACACTGTTTTCTCAGGCTGCTGGAGTGGCCAATGAAGCAAGCGTAAAGACTGAAGAGGAGCTGAAAGAGGAGGTAAACGATGACGATCTGATTCAGATCCAGGAGCACAGACAAATACTGAATGCAGAGAGTGCCACTGAAGCCAAACAGCTGCTCCTCATTCACCAGGTAGAGACTGCACAATTCATTTAGATGACACATATAATGTAATAGACTTGATAAATCTGCTCATCAATTGGATCCGCTAATATGATTGCTGTGAATAAGTGATTTGTTCTGTTATGTGACAATACAAGGGGTGAATCTTAGGATTGTTTGTTTTCTCTTCTGTCTGACCTTCCACAGCAAAATCTGAAGACCCAGCAAGGGAAAGATATGGATGTGAGATGTCAAGGTAATTTCTTTAAAGAAGACCGGGCAGCTCAAGAGAAACACCTGCAGG[T/C]GAGGCTTTTAGCACAATAATGGTATTCATACATTTGACCTGCCGTGTTGTGTGTCAGCTTGTAGTTTGCTTGCTACATGATCCTAGAATTCACTCACTTTCCTTCGACTTAGTCCCTGGTTTATGGATAAATGCCAAATTCCTCCATCAGATATGAGACCTTTTATCAACGTTTACATTTTAAATAAGTGGCAAGAGGAGTGGGATGCAATGGAAAATAATAAATTGTATAAAAACTCAAACTGAATTTTGAGACATTTTAGACTAGATTTGATCAAGTGATTTTTACCAGATGTCGTATTGGACATATAAGATTAGCCCGCGTCTTTTTGCTTAAAGATAAAGACCCCCCTCAATGTTTGTAATGCACAATTCCCCCTTACTGTAAAACACATTTTACTGGACTTTTTTATGAAATGAAATCTCTTAAGGACATTTTTAATAAAGTGACACAAGGAAAATGTATAATTTTTATCATGTATTAACTCTAAAAATCTTATT

Associated Phenotype:

Not determined