Busch Lab

ZMP

si:dkey-15j16.4

Ensembl ID:
ENSDARG00000070470
ZFIN ID:
ZDB-GENE-030131-6288
Description:
Putative E3 ubiquitin-protein ligase SH3RF1 [Source:UniProtKB/Swiss-Prot;Acc:A5D8S5]
Human Orthologue:
SH3RF1
Human Description:
SH3 domain containing ring finger 1 [Source:HGNC Symbol;Acc:17650]
Mouse Orthologue:
Sh3rf1
Mouse Description:
SH3 domain containing ring finger 1 Gene [Source:MGI Symbol;Acc:MGI:1913066]

Alleles

There are 4 alleles of this gene:

Allele Name Consequence Status Availability
sa43432 Nonsense Mutation detected in F1 DNA Not yet available
sa43433 Nonsense Mutation detected in F1 DNA Not yet available
sa37020 Nonsense Mutation detected in F1 DNA Not yet available
sa23692 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa43432
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000050559 Nonsense 121 880 2 12
ENSDART00000132007 Nonsense 121 857 2 12
Genomic Location (Zv9):
Chromosome 20 (position 23729237)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 23848038
GRCz11 20 23747138
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTAATGGATCGGCAGTGGCGGGGGTCCGAGCGCAGGGTGCCGGGGGAAGC[C/T]AAAGGGATCCTGGTCCCACAGGGGGACAATCTCAGCGTGTCCAAGCAAAG
Long Flanking Sequence:
CTGCAGTGAATGCTAGAGACTTGATCATGACTACGGCATGGGAGTGACGTGACGTCAGGATTGGACTTTCCCTCCTAACAATCTCATATGCACACACCCACACCATGTGCTTCTCTCTCCGGCGAGACAAAACTGACTGAATGAACGAGTACGCTGAGAAAGATTGTGCGAGTGTGAAAATGGACGAGTCTGCGCTCCTGGACCTGTTGGAGTGTCCGGTCTGCTTGGAGCGTCTAGATGCCACGGCGAAGGTGTTGCCATGCCAGCATACGTTTTGCAGACGCTGCCTGCTTGGAATTGTGGGATCTCGTGGAGAACTGCGCTGCCCCGAGTGCCGCACGCTAGTGGAGAGCGGCGTGGATGAGTTGCCTAGCAATATCCTCCTTGTACGGCTACTAGATGGCATCAAGCAGAGGCCGAGGAGGACTGGAAGTGTGCATGGCACATGTGCTAATGGATCGGCAGTGGCGGGGGTCCGAGCGCAGGGTGCCGGGGGAAGC[C/T]AAAGGGATCCTGGTCCCACAGGGGGACAATCTCAGCGTGTCCAAGCAAAGAGCACTCCAGTTAGGGTGAGTTTAGCTGTTTTTACCAGACTCACACAGTCCCACGCGTCAGTGTTTGGTCAAATACAGTAAACATCTGTTTTGGATGTGTTTTTATTTGCTTGATTGGTAAAGAGCTGGTCATGGGTGGTACCGCTCTATTGGCATAAATCAGGCCTTGGAGACATCCTGCAAAGCCGCGGCCTGATATGAAAGGAAGAATAATCTCTGAATTAATTGGGTGTTGAGGGAATTTGAAATATTTCTTTCTCGTTCACTCTGATCTGTGTCATTACATTGGATAATGAACTCTAAAAAAAGTTTGTTTTGGAAGACTCAAATGCACATTCAGGAGAATAAATACTCAGTCGACTAAGTTTAGAAGAAACCACATTCTCTGATGTAGGAATACACATTTTGTTTGCATGCACTGTGAAAGTTAGACTTCAGCCAGAACGAAGC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa43433
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000050559 Nonsense 769 880 11 12
ENSDART00000132007 Nonsense 746 857 11 12
Genomic Location (Zv9):
Chromosome 20 (position 23815133)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 23933934
GRCz11 20 23833034
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GAAATGGCTCTGTCTGGGTCAGCAGGGCACAACGGACGCATTGGTGCCTG[T/A]CCTATGGATTCGGAGCTATCGATGTCCTCCTCTTCATCAAACACAGATGC
Long Flanking Sequence:
TGATTTACAATGATCATGTTACCTGGTAGGACAGTATGAGACGCCACTATGACTTTTACTGTGGAACATCTTCAACTTTGTCTCTATTTTTGAATCAGTTGAACCCAAAAGGATGTTTTTTGTTTTTAACAAGTGAAATTTGTGTTACTACAATTATTTGTGTCAAATCCACAGCTTAAATTCATTAATACCCATTGTTGACACTTTTCATTGAGAGCTAATCATCTTCACACATCCTGTGCTAATATTTACATCCTTGGGTAACACCACATTTTCACTGATCTGCATCATTTAACTCATTTCACAAATGTGTGATTTCAGAGAGAGAAGAAAGGCCTGCTGAAACTGCTGTCCAATAAAAAGAAGCTCCGCCCATCTCCTCCATCCTCCCCCACACTGGAGGCAGAGCAATCTGTTAGCATGGAGCTTCCCCAAGGAGCAGTGGGTCCAGAAATGGCTCTGTCTGGGTCAGCAGGGCACAACGGACGCATTGGTGCCTG[T/A]CCTATGGATTCGGAGCTATCGATGTCCTCCTCTTCATCAAACACAGATGCGGTGACACACAGGAGCAGCCCACAGGACAACACTGCCCCCATTGCTCCGCCTCCTCGACAGCCGTGCTCCTCCCTGCTCTCCATGCAGCATGATGGACGGCCAATCGTGTGTGAGAGGTACAAAAATAACCCAAACAGTTACACTAGTGATGGGTAGTTTAGATCATTTTACTGACTCTGACCTTTGAGTCTCGTTGATTGAGATGAACAAATCTTTTATTGAAGTCTAAGCTGGAAACACCCATGGTTAGTTCACCTTTTGAGTCTGTGGGTTTTTGAGTTGTTTGTTCATTACGTGTCAGTACATAAAGAGATGACTCAAAATCGAAGACTTAAGAAATGAACGAACCAAATCTTTTTCCAGCTCTAGATGCATATGATTGGCTTCTGTCTTTCACGTGATGAACAAACAACTCAAACACTATGGAGGACTTGAAAAATGAACTACTC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa37020
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > G
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000050559 Nonsense 826 880 12 12
ENSDART00000132007 Nonsense 803 857 12 12
Genomic Location (Zv9):
Chromosome 20 (position 23817287)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 23936088
GRCz11 20 23835188
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTCTTTGTTCATTTTTTTCTAATCATGTTCTGTTCCTCTTCCTCCAGGTA[T/G]CGTGTGGTGGTGTCCTATCCTCCCCAAAGTGAAGCAGAGCTGGAACTCAA
Long Flanking Sequence:
AAGTGATTTAACTAAAATAAAAAGTAACTCGCTTTACTTTTTTTTTAAGTATCTAAATATTATTACTTAGTTTTTATGGAACACATGTTACTTGTAATGCGTTACCCCCAAATCTGCCCATCACAACTTCATCTGCTGTAAAAAATATTTGTACATCCTGATTCCCTAGAAAAGAAGTGCTTTAAGTTAAGTAAGAAGCAGAAGTTGCAGTTGTGTTTTACTCTATAGTGTGACAGGTAAAACTATATGAAAAAAATGTTGGGCTAGATGGCAATTGTTTAAATGGTAGTTTGCATTTGGTGAATGTTAGTAAGTGGTTTCCCTGCCTTTACAAATGCATTATCAGAGATAAGAAGGTTTAAGATTACAAAAGCACATACATAATAATAAAAACACTCACAGATAATTCTGATACAACACAATATTAAATACAAAAGAAGTTCACTTGATTTCTTTGTTCATTTTTTTCTAATCATGTTCTGTTCCTCTTCCTCCAGGTA[T/G]CGTGTGGTGGTGTCCTATCCTCCCCAAAGTGAAGCAGAGCTGGAACTCAAAGAGGGAGACATTGTATTTGTGCACAAAAAACGAGAGGACGGCTGGTTTAAAGGAACACTACAGAGAAACGGCAGAACCGGGCTGTTTCCTGGCAGCTTTGTTGACAGTATCTAACGTACACACAGCAACTAATATTTAGATATCAAATTCTCCATCACTGAAAACCCCACACTGAACTTAAGCCTTCATTCGCTGAGCAGTGGTCTGAAACTCAACTGCTGGAGTTTTGCTTCATCAGCTGCATGGATTTAACCACAGTCTTATGAAAATCTCAGACCAGTCCTAGTCCTTTAGCATTAGATCAAAACCCCCTTTCCCCAAACACTTCAAAGCGGCAGAGTTTTCGTAGTAGGTGCCCTATTTCTAGCTCAGTAGATGAAGTTGTGATAGGATCCGTTAATTTATGCATCTGTAACATTTCAAAGACATTTAATGTGTGCCTTGTACTG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa23692
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000050559 Nonsense 832 880 12 12
ENSDART00000132007 Nonsense 809 857 12 12
Genomic Location (Zv9):
Chromosome 20 (position 23817305)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 23936106
GRCz11 20 23835206
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTAATCATGTTCTGTTCCTCTTCCTCCAGGTATCGTGTGGTGGTGTCCTA[T/A]CCTCCCCAAAGTGAAGCAGAGCTGGAACTCAAAGAGGGAGACATTGTATT
Long Flanking Sequence:
AAAAAGTAACTCGCTTTACTTTTTTTTTAAGTATCTAAATATTATTACTTAGTTTTTATGGAACACATGTTACTTGTAATGCGTTACCCCCAAATCTGCCCATCACAACTTCATCTGCTGTAAAAAATATTTGTACATCCTGATTCCCTAGAAAAGAAGTGCTTTAAGTTAAGTAAGAAGCAGAAGTTGCAGTTGTGTTTTACTCTATAGTGTGACAGGTAAAACTATATGAAAAAAATGTTGGGCTAGATGGCAATTGTTTAAATGGTAGTTTGCATTTGGTGAATGTTAGTAAGTGGTTTCCCTGCCTTTACAAATGCATTATCAGAGATAAGAAGGTTTAAGATTACAAAAGCACATACATAATAATAAAAACACTCACAGATAATTCTGATACAACACAATATTAAATACAAAAGAAGTTCACTTGATTTCTTTGTTCATTTTTTTCTAATCATGTTCTGTTCCTCTTCCTCCAGGTATCGTGTGGTGGTGTCCTA[T/A]CCTCCCCAAAGTGAAGCAGAGCTGGAACTCAAAGAGGGAGACATTGTATTTGTGCACAAAAAACGAGAGGACGGCTGGTTTAAAGGAACACTACAGAGAAACGGCAGAACCGGGCTGTTTCCTGGCAGCTTTGTTGACAGTATCTAACGTACACACAGCAACTAATATTTAGATATCAAATTCTCCATCACTGAAAACCCCACACTGAACTTAAGCCTTCATTCGCTGAGCAGTGGTCTGAAACTCAACTGCTGGAGTTTTGCTTCATCAGCTGCATGGATTTAACCACAGTCTTATGAAAATCTCAGACCAGTCCTAGTCCTTTAGCATTAGATCAAAACCCCCTTTCCCCAAACACTTCAAAGCGGCAGAGTTTTCGTAGTAGGTGCCCTATTTCTAGCTCAGTAGATGAAGTTGTGATAGGATCCGTTAATTTATGCATCTGTAACATTTCAAAGACATTTAATGTGTGCCTTGTACTGTCTCACTTTACTGTATAT
Associated Phenotype:
Not determined