ZMP

sytl3

Ensembl ID:

ENSDARG00000043468

ZFIN ID:

ZDB-GENE-040724-150

Description:

Novel protein [Source:UniProtKB/TrEMBL;Acc:Q5RHM8]

Human Orthologue:

SYTL3

Human Description:

synaptotagmin-like 3 [Source:HGNC Symbol;Acc:15587]

Mouse Orthologues:

Gm2792, Gm2833, Sytl3

Mouse Descriptions:

predicted gene 2792 Gene [Source:MGI Symbol;Acc:MGI:3780960]
predicted gene 2833 Gene [Source:MGI Symbol;Acc:MGI:3781005]
synaptotagmin-like 3 Gene [Source:MGI Symbol;Acc:MGI:1933367]

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa43396	Nonsense	Mutation detected in F1 DNA	Not yet available
sa43397	Nonsense	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa43396

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

C > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000048659	None	None	206	None	6
ENSDART00000063818	Nonsense	195	353	5	9
ENSDART00000138339	None	None	130	None	3
ENSDART00000143115	None	None	226	None	7

Genomic Location (Zv9):

Chromosome 20 (position 13468672)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	20	13657918
GRCz11	20	13553898

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

GCTCATCCGGCTGGCAGACATGGATCTGGAGGACACTGACTCTCAGCGTT[C/A]GCTCTGCTGCAAACTTAATCCAAAGGTCAGATCTGCTATTCTCCTGGTTT

Long Flanking Sequence:

CACTTCTCAGATCTCTGACAACAACGCTGACTCAAAGAAGCAGATAGTTTGTAATTTTTTGGGTTTTCTGACTCATTTCTGTTATGGTCTGCGCTATTTGCAGCATCTTTATGAATTTGCATGTGTTGTGAGAATTTGTGTGCACACATGTTGTCAAAGTGATGAAGAAGTTTTTGCAATAGTGTTCTTTCTATTTGCTTGTGTTTTCTTAAAGTGTAACATGTTTAAGCTCCTTCAGCCACCATAAAAACTTGTGTTTTTAAGGCTCCATTTGTAATATTCACAGTTTAGTTGACACAATTTTTTTTTACATTTTTTAGACTGGATGTAATTAGGTGTTTGTTTGTGTGTTCAGTGTGTACTTTCTGCTGATCTGCTGTCCAGCGCTGTGCTCCAGCTCTCCGTCTGGCACAGTCGAGGACTCAAGAGGAGACTGTTTCTGGGAGAGACGCTCATCCGGCTGGCAGACATGGATCTGGAGGACACTGACTCTCAGCGTT[C/A]GCTCTGCTGCAAACTTAATCCAAAGGTCAGATCTGCTATTCTCCTGGTTTATGATGCTACACACTCATATTGTTCTACCTCACATTCATAAAGTAAGTAGGCTATAGCCATCTGATTGTGTTGTCAAGAATGGTGGAGGAAGTACACAAACCTGGCACTTTAGTAAGCACAGAAACTATATTTAAATATTACTCTAGTTGAAGTATAATGTTCTCCTTTTCAATATTACTTGAGTCTAAGTAAAAAAGTGCTTGATTTGTAATGCACTTAGGTAGAAAAAACTTTTTTTTTAAAATATGTACAGATGAATGATTATTTTGTATGAAAGTTGAATTAACAAAACTAGCCCTACCCCAATAATCACACTAATAAGTCATGATAATTCAAGTGAAAACATGATGATCCACTTTCACAAGCTGAACCCCATTCAGATCAGTTTCTTTACTGGAGACTCACTCTGACAGGATCCTTTGAATCAGTGAATCATTTCCTGGAGACTC

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa43397

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

C > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000048659	None	None	206	None	6
ENSDART00000063818	Nonsense	322	353	8	9
ENSDART00000138339	None	None	130	None	3
ENSDART00000143115	None	None	226	None	7

Genomic Location (Zv9):

Chromosome 20 (position 13476674)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	20	13665920
GRCz11	20	13561900

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

GCAGGCCACACTCACACTCAACCTGTGGGAGAAAAACTGCTTACTTACAT[C/A]AGCACGACTGCACAAAGGTAACACACACATTTACTATACAAACTATATGT

Long Flanking Sequence:

CAGAAATAAAGTGAACAAAACTTTCTCCAGAAGAAAAAGAATTTCCTTTTTTTCCGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAAAGACTAAATTCCTCCATTCCTCTCCACAAGAATGTATTTGATGTATTGTATATACAGTGATTTATATACTGTATAAGCTGTACTTGTGCCTAATATTTTGACCAAAACTGTTTGTGTGTTGTCTTGTTTTTCCAGGATCCTTTGCCTTCCAGGACACAGAGAGCTGGTACGGAAAACTTCAGCATTGAAGAAAACTGATGGCAGTATCCGAATGAGCTTCAGCAGTCTGAGCCAACAGGAGCTCCAGCAGGCCACACTCACACTCAACCTGTGGGAGAAAAACTGCTTACTTACAT[C/A]AGCACGACTGCACAAAGGTAACACACACATTTACTATACAAACTATATGTTCTATCCCCCGTACCCCAACTTAAGAGGAAACAATCTGCATTTTTACATAATGAACTACCTGTGCACTTTATAATTGCAGAAAACTGTTTAGAAGTGTTAAAAGTGTCTGAGAAGATGTCCAAAATCTTTACATACAGTGAACCAGAGATTGTTTAGAAGCATGTCACTGATGAGATCACGGATGTTTATTGTATTATGACCGAAATGGCCGTAAAACCCAGCAGACACATGACATCAACATGACGTCAGATTGAAGTTGTACCCTTACATGGGGACCTTGCATTTTGTTTGGAAATGAATATCGGGTAAACGTCAGAACTCAACGTCAGGCCAACGTCAATGTCCAACCTTAAACCAACAAAATATCAACGTGTAATGATGTTACAGCTTGACGTTGTGTGGATGTTACCACTAAGACGTCTATCAAATGTTCGATTTTAGTTGCCAAA

Associated Phenotype:

Not determined