Busch Lab

ZMP

prdm1b

Ensembl ID:
ENSDARG00000053592
ZFIN ID:
ZDB-GENE-080618-2
Description:
PR domain containing 1b [Source:UniProtKB/TrEMBL;Acc:A5XCE7]
Human Orthologue:
PRDM1
Human Description:
PR domain containing 1, with ZNF domain [Source:HGNC Symbol;Acc:9346]
Mouse Orthologue:
Prdm1
Mouse Description:
PR domain containing 1, with ZNF domain Gene [Source:MGI Symbol;Acc:MGI:99655]

Alleles

There are 5 alleles of this gene:

Allele Name Consequence Status Availability
sa23609 Nonsense Available for shipment Available now
sa12402 Nonsense Available for shipment Available now
sa18430 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa23609
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000130671 Nonsense 24 377 2 3
Genomic Location (Zv9):
Chromosome 19 (position 50152156)
Other Location(s):
Assembly Chromosome Position
GRCz10 19 48516996
GRCz11 19 48177786
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GGGCAGTTGCAGCACTTCATTGACGGTTATGATGTCCGGCTCAGCAACTG[G/A]ATGCGTTACGTTAACCCGGCGCGCTCGCTGGCCGAACAGAACCTGGTGGC
Long Flanking Sequence:
ATGTTAAATAATTCTGATTTTAAGCATTAATAATGTTAAATAATTCTGATTTTAGGCATTAATAATGTTAAATAATTCTGAATTAGTTTAGTTTTGTAGTTTTAAGCATTAATAATGTTAAATAATTCAGATTTTAAGCATTAATGGTGTTAAATAATTTTAATTTTGTTTGGTTTTGTTATTTTAAGCATTAATAATGTTAAATAATTATGATTTTAGGCATTAATAAAGTTAAAGAATTTAGATTTTAAGCATTAATTATGTTAAATAATTATGAATTACTTTTGTTTAGTTGTTTTAAGCATTATTATTGTTAAATAATTCTGATTTTGTTTGGTTTTGTTATTGCAAGCATTATTGGCATTAAATCCATCAGATATTTATATAGATATTTAAATGCATTAATGTGTGTCTCTTTCTCGGTCTCTCCTAACACAGATCTACAGTGGTGGGCAGTTGCAGCACTTCATTGACGGTTATGATGTCCGGCTCAGCAACTG[G/A]ATGCGTTACGTTAACCCGGCGCGCTCGCTGGCCGAACAGAACCTGGTGGCGTGTCAGAACGGGCCGGATATCTTCTTCTACACCCTGCGGCCGCTGGAGCCCAAGCAGGAGCTGCTGGTGTGGTACAGCCCCGAGTTCAGCCAGAGACTCTGTGGACAGCAGGAGACGACAGACAGCACAAGCACAAGTCAGTCAATAACAAAACATGCTAAACCATCTTATAGTTGTTTATAGCAGCGCTTTCTCTGGAAAAAAAAATAGAGGTTTTATTCAATGTGGAATTTAAAGTGTAGCTCAAATATGTCACTTTGGACAAAACACCAAATGACTTAATGTAAATGTAAACGTAGTATGGTCAAATTGTTTCCTTAAATGTCTTGATAACATCACCTTCTTCAGACTGTCACATTATTAGTCATCCGCTCTGATATTGCTTTTGTTTCTCTGCAATCTAAAATGTGCAGATGTCTTCATTTTGGTGTTCTTATTACATTTTAATT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa12402
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000130671 Nonsense 199 377 3 3
Genomic Location (Zv9):
Chromosome 19 (position 50144313)
Other Location(s):
Assembly Chromosome Position
GRCz10 19 48524839
GRCz11 19 48185629
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GGTCACCGAGAGGGTTTGATCTCCTCATATCCGTCAATACGGTCTCCATA[T/A]CCGCTCTTACCGCAGTATAACCCTCATTACCARCACATGCTCATTCCTCC
Long Flanking Sequence:
CCAATACTGGGAAGGACATTCACTGTGTAAAACATTGCTGGAATAGATGGCGGTTCATTCCACTGTGGTGACCCCTGATAAATAAGGGACTAAGCTGAAGGAAAATGAATGAGATCAGTGACATACATGATTAATAACCCTCTCTCTCTCTCTCTCTCCACAGAGTACACATCAGATATGGAGTACCAGAAGCCTCCTCTACCTCAGTACACATATTACCCCAAACACCCCTCGAACCCACAAAACCATCCCTGCGACACAAATAAAGACGACGAGGAACCTGAAGAGAAGATCGACATCGAGAGAGACACGCCGCCAGACACTCCAGACGAGCAAATAATGGACTTCAGCAAGAAGATCCACAAGTCAGAACCAATGCATGAAAAAACAAACATTTACCCGAGCCTGTCTCCACCGCAGGACGTCCCGCTGCATCTACACAGCCTGTACGGTCACCGAGAGGGTTTGATCTCCTCATATCCGTCAATACGGTCTCCATA[T/A]CCGCTCTTACCGCAGTATAACCCTCATTACCAGCACATGCTCATTCCTCCATACTCTCCTCCGTTCACTTCAATGCTTCCCACAAAACCAGCCCACCGATACGGCTTCATGAATCCTGACGGTTTGTCCTATCCTTCAATACCACAGTCAGGTTTATTACCTGTATCTCTTCCATATCCTAACACACTCCACGGAGGATTAAACGAAAGGGGGCACAATACTCCCCCCAGAGGAGCGCCTGCAACGCCAGAACTTTCCCCTCAGACTTCTCCTTGCCAGACGCATTATTCTGAATGTGAAGAAGCCATAAATCTGAGTCTGACTACACCTAAGAGCACACCGCCTCCGTCAGCCTCTCCAGCCATGATTCCTGGGTATAAATCTCTCCCGTATCCACTGAAAAAGCAGAACGGGAAGATCAAATATGAATGCAATGTCTGTATGAAGACTTTCGGACAGCTCTCCAATCTTAAAGTGAGTACAATGTGTGTGTTTAAATG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa18430
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000130671 Nonsense 346 377 3 3
Genomic Location (Zv9):
Chromosome 19 (position 50143872)
Other Location(s):
Assembly Chromosome Position
GRCz10 19 48525280
GRCz11 19 48186070
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TATCCACTGAARAAGCAGAACGGGAAGATCAAMTATGAATGCAATGTCTG[T/A]ATGAAGACTTTCGGACAGCTCTCCAATCTTAAAGTGAGTACAATGTGTGT
Long Flanking Sequence:
AGCCTGTACGGTCACCGAGAGGGTTTGATCTCCTCATATCCGTCAATACGGTCTCCATATCCGCTCTTACCGCAGTATAACCCTCATTACCAGCACATGCTCATTCCTCCATACTCTCCTCCGTTCACTTCAATGCTTCCCACAAAACCAGCCCACCGATACGGCTTCATGAATCCTGACGGTTTGTCCTATCCTTCAATACCACAGTCAGGTTTATTACCTGTATCTCTTCCATATCCTAACACACTCCACGGAGGATTAAACGAAAGGGGGCACAATACTCCCCCCAGAGGAGCGCCTGCAACGCCAGAACTTTCCCCTCAGACTTCTCCTTGCCAGACGCATTATTCTGAATGTGAAGAAGCCATAAATCTGAGTCTGACTACACCTAAGAGCACACCGCCTCCGTCAGCCTCTCCAGCCATGATTCCTGGGTATAAATCTCTCCCGTATCCACTGAAAAAGCAGAACGGGAAGATCAAATATGAATGCAATGTCTG[T/A]ATGAAGACTTTCGGACAGCTCTCCAATCTTAAAGTGAGTACAATGTGTGTGTTTAAATGTGTTATATCACCTATTTTAAAAGTGAAGATATACTAAAGGTTAACTCTGTATTTATCTTGCTGAAGGCAAAATTATTTGTCAATAATAAAGGGAATAGAAGTGAACGTGTATTCTGAAAATGTTTTTAGATTTTTTAATATGTTTTTAATTTAATTTGTTTTTATTTGTACTGTTTTGTTTGATTTATTTTTGTTTGTTTGATTTATTTGTTATCAAATAATGTTTGTTTTATATATTTTTTGTGCTGTTTTGTTTCTGTTTTTGTTGTTTTTATTATTTTTGTTCATTTTTTACTTGATTTTTTTTATTTTTTTATTTTTTTATTTGTAGTATTTTGTTAAATTTTTTGTTTATTTTTTATTTATTTTAATTTAATTGAACTTTAATTTATGTGATAACATTTTTATTTTATTTTATTTTTTATTATTGAATTTATTTAT
Associated Phenotype:
Not determined