Busch Lab

ZMP

si:ch211-195k18.2

Ensembl ID:
ENSDARG00000057649
ZFIN ID:
ZDB-GENE-031010-36
Description:
hypothetical protein LOC378993 [Source:RefSeq peptide;Acc:NP_001073631]
Human Orthologue:
SATB1
Human Description:
SATB homeobox 1 [Source:HGNC Symbol;Acc:10541]
Mouse Orthologue:
Satb1
Mouse Description:
special AT-rich sequence binding protein 1 Gene [Source:MGI Symbol;Acc:MGI:105084]

Alleles

There are 4 alleles of this gene:

Allele Name Consequence Status Availability
sa17302 Nonsense Available for shipment Available now
sa43265 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa12761 Nonsense Available for shipment Available now
sa16271 Essential Splice Site Available for shipment Available now

Mutation Details

Allele Name:
sa17302
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
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Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000056205 Nonsense 62 728 3 11
Genomic Location (Zv9):
Chromosome 19 (position 20963009)
Other Location(s):
Assembly Chromosome Position
GRCz10 19 20896389
GRCz11 19 20480712
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AATATAGTTCCTCTTTCTTTCAACGCAGGTAGTTTACTTCCAGTATTYTG[C/A]ATGGTGGAAMAAAGCGATGTCCCACCAWCCGAAGGGAAGCGGTCGGAGCA
Long Flanking Sequence:
GACGTTTGTATCTGAAGTGTTCATATTTTCATTTCATTTCAGCTTTATTTGTATAGCACTTTTACAATGTCGATTGTGTCAAAGCAGCTTCATATAAATTAAATTAAATAACTAAAAAATAAATGAAATAATTTTCATATACATAAATAATGTGTATGTGTGACTATAAATAATTTATACATCATTTTCTATTCTAAAGGTTGGTGAAATCCAAGATTTAAAACAGTGATGGACCATTTGGCGACCACTAGTAGCACCCAGGGGCCGGCCCTGTGTGAACCCTCTTATCCTCCCTGTAAAATGGCTCGTATGGAGAATTGTAGAGATCTGCCTGTACCTGGAGTCACACCTGTTAGCTCCAAACAGACATCACACACTAACAGGAGGAAAGGTATTCATTAATGGCCATAAATGTAGTATACCATATCAGTTCATCCCATTTTTCTGAGTAATATAGTTCCTCTTTCTTTCAACGCAGGTAGTTTACTTCCAGTATTCTG[C/A]ATGGTGGAACAAAGCGATGTCCCACCATCCGAAGGGAAGCGGTCGGAGCATGCAGAATTTGTGCTGCTGAAGAAAGACCTGCTGTTCAGCCAGATTACAGAAGCTGCATTGCAAGAGCTGGGATACACACACACCGCAGCGGCTCTGGCTACAGGTACACACACACACACACACACACACACACACACTGATGAATAATTCACACTCAATTCCAGTTGAATATTTAAGCCTAAAGGATAGGGACGGAATAGACTGCGACTATGAAAAAAACTACAACCGGCATTATATTATCTTACATTTTATGCTTTATACATAAGTTAGTATTTAGAAAATTGGTGTGGGTAAAAACTGTTTAAAAAAAAAAACAAGTGTTTTATTCTCATCAAGGTTATTCTGCTCAAACAAATATTGTGATATAGTAAGATTGTGAAAGAAGTTTCCTACTTTAATATATTTTAGGATGCAATTCGGAGCTTAAAATAGCTTTTTTAAAGGGATAG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa43265
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000056205 Essential Splice Site 156 728 5 11
Genomic Location (Zv9):
Chromosome 19 (position 20954472)
Other Location(s):
Assembly Chromosome Position
GRCz10 19 20887852
GRCz11 19 20472175
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTTTCTT[A/T]GTGTTTCTAAATTAGAGGACTTGCCCGCTGAGCAATGGACTCATTCTACA
Long Flanking Sequence:
CAACAGTAGGAGACATGCTTCAAGACCTATACCACGTTATCACCTTAAGAATAAAGCTGCACAGGTACAACACACACACATTCACACCACACACAAACACACACACACACACACATGCTCTAAGTATCACGTTTTTCTCAAAACAATCAGAATTAAAACTCCTCTGATTTATGATTAAGGCTAATTTTCGCAGGCAATTTAGTATTAAAACTAATTTCAAAATTATTAAAAGTTATTATAGCTATTAAAGTTTTGAGGATAAACACTTAATAATGTGGCTATTTGTGAAATAATAATTATTTGTGATTAATGTCCCACAGTGTAATTAATTACTGCAGTACATTGTTTTTCTTCTTTGTTTTTGTTTTTTTTTTCTCACTGACTCACGCACATTCTCTTCTCTCTCTCTCCCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTTTCTT[A/T]GTGTTTCTAAATTAGAGGACTTGCCCGCTGAGCAATGGACTCATTCTACAGTCAGAAATGCTCTAAAGGATCTGCTTAAAGAGATGAATCAGAGCACATTGGCTAAAGAGTGTCCATTATCTCAGGTATGGCTTCTTAAAAATCTTTTTGTCTATAATAAGTCACTGTAAATAGATTTTACGGCTGGTAAAAAGTAACATTGCAATATCTAATGTCTATAGAACTTGTAGTATCACAGGATTCCTGATGAACAACAGCCTCTAAATAAATTATAGTATATAGGATCTCATATTTCCTGCGTTGAGTAGTACAAGTATCTACACAAAAGGCAGTATTATATGCCTAGTTACATTTCAAACATTCTGTACTTTATTCAGCTTAATAGCATGTACAGTTGAAGTCAAAATTATTCTGTGATTTTTATTTTTATTTTTTTAAGATATTTGTCTAATATTTTCCAATGATGTTTAACAGAGCAAGACATTTTTCACAGTATTATT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa12761
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000056205 Nonsense 286 728 7 11
Genomic Location (Zv9):
Chromosome 19 (position 20949792)
Other Location(s):
Assembly Chromosome Position
GRCz10 19 20883172
GRCz11 19 20467495
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AGATGCAGGCTGGGATGCCTGGTCTAGTTATGGCTCAGCTTCTCTCMCAG[C/T]AACACGCCATGTCTCAGCTCCTCACACACGCTCACACCCACTCACACATA
Long Flanking Sequence:
AATAATAATAATATATATATATATATATATATATATATATATATATATTACTAATGTTTTGCTTCTTACACTTTACATACCTGAAACTTGCCTACAGCACTTATTCATTGTTGCTTGTGTAAATTGCTTCCTTGTTCTCATTTGTAAAAAAAACATTTAATATAAAATATTTAATTTGGATATAAAACCTATACCAAACTAAAACACTGAATTTATAACAAACTGAAAAGTAATAAAAGTAATAAATTATTATTTAAAATAATCTGATTATAACTATAAGATTTTTAAAAAGGCTCCAGTGATTTTAATCCAAATACTGTAGTAATAAATGTTTCTCCCTCTTGTCAGGTGACATGAGCAGGCAGTGCACTCAGCCCTCTTCTTCCAGTCAGCCCTCGATGTTCCAGCAGCCAATGGAAGGCAGCAGTGCAGAGTCACGGGGTGTTGTCCAGATGCAGGCTGGGATGCCTGGTCTAGTTATGGCTCAGCTTCTCTCCCAG[C/T]AACACGCCATGTCTCAGCTCCTCACACACGCTCACACCCACTCACACATACCTCATCCTGCACCTCTAAAGACTCCTCCCAAATGCAATGTGTCGCCTCCAACAGTAACTCAATGTCCTTCTCCTGTCACCGACGTGTCACCTGAAATTTACCACTGGGTGCGCGAGGAGCTGAAGAGGGCAGGCGTTTCCCAAGCTGTGTTTGCACGAGTGGCCATTAACAGGACACAGGTAATATGACTTTCTCTACACACTTTATGATTATTCATCGAATGTCAATTTTTTTGTAAGGATTGGGCTGAATTATTATCATATTTAGAATTTTATTTAATATTTTTGCAATTTTTGTGACAAAGTTGCGTTTTGTCATTTTTATTTGTTTTTGTTTTTTAATATAACTGTATAGTTTTTATTATTATTATTTTATATATGCGCAATTGCGTTGATGAAGTTGTAACAAATTGTTTAAAGCTTGTTTTTTAATATATATAAATATATATG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa16271
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > G
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000056205 Essential Splice Site 479 728 9 11
Genomic Location (Zv9):
Chromosome 19 (position 20944334)
Other Location(s):
Assembly Chromosome Position
GRCz10 19 20877714
GRCz11 19 20462037
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AAAAGTGTCACAGGCCTTGTTTGCAAAAGYCTCTGCAGCCAAGAGTCAGG[T/G]AAATAWATACAKGAGAGATCGAATACATTTAGGCWAATTAAAAACCATGA
Long Flanking Sequence:
TAATGATACAGTTTTAAATGATAGCTCATCCAAACTTTTAATTGTGTCATCATTTACTCACCATTTACTTGGTCGAGGGTGTTATTTCTTTTCTGTTGAACAATGTTGAAAAGCTGTAACCATTTCAGTATTTGTTTTTCCTACTATACAAGTAAATGGTTACAAGTTTACAACATTCTTCAGTGTATATATATTCTTATATTGTGCTCAACAAAAAAAAAAAACTAAAACTGGTAAACGGTGTGTACAGAATCATGAGAGAATTGTCATTTTTGGGTGTGCTAATCCCTTTAGGTGGCTTTTTCTGAACGCTGTTGTCATAAAAAAAAATCTGTCACCACAGGCCAAACTTTCTCCTGTTTCCAAGGATATTGTAGTGAAAGTGGAATGTGATGACACTGGAATAAACTACGGCATTTATGAAGAAATACAGCAAGAAATGAGGCGAGCAAAAGTGTCACAGGCCTTGTTTGCAAAAGTCTCTGCAGCCAAGAGTCAGG[T/G]AAATATATACATGAGAGATCGAATACATTTAGGCTAATTAAAAACCATGAAAAAAAGGTTCCACCAGCACATGTGTTAATTTATCAGATGCTTTTATCCAAAACTACTGTATATCATTTCAAATGCTGTAACAGTTAACGTCAGAATTATTAGCCCCTCTTTGAATTGTTTTTCTTTTTTTAAATATTTTACAAATGATGTTTAACAGAGCAAGGACATTTACACAGTAAGTCTGATAATATTTTTTTTCTTTTGGAGAAAGTCTTGTTTGTTGTATTTCAGCTAAAATAAAAGCAGTTTCTAGTTTTTTGAAAAACATTTTAAGGTCAAAGTTAGGCCCCTTTAAGCTCTTTTTTTTCAATAGTCTTCAGAACAAACCATCATTATACAATAACTTGCCTAATTACCCTAACCTGCCTAGTTAACCTAATTAACCTAGTTAAGCCTTTAAATGTCAACTTAAGCTGTATAGAAGTGTCTTGAAAAATATCTAGTGAAAT
Associated Phenotype:
Not determined