Busch Lab

ZMP

vps52

Ensembl ID:
ENSDARG00000009175
ZFIN ID:
ZDB-GENE-010430-2
Description:
Novel protein similar to vertebrate vacuolar protein sorting 52 (Yeast) (VSP52) [Source:UniProtKB/Tr
Human Orthologue:
VPS52
Human Description:
vacuolar protein sorting 52 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:10518]
Mouse Orthologue:
Vps52
Mouse Description:
vacuolar protein sorting 52 (yeast) Gene [Source:MGI Symbol;Acc:MGI:1330304]

Alleles

There are 5 alleles of this gene:

Allele Name Consequence Status Availability
sa23494 Nonsense Available for shipment Available now
sa18372 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa23494
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000047190 Nonsense 379 724 12 20

The following transcripts of ENSDARG00000009175 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 19 (position 18330813)
Other Location(s):
Assembly Chromosome Position
GRCz10 19 19176048
GRCz11 19 18638901
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TAACAGTATTTTGTCTCACTCATTTCTCTTTGTCTCTGTCAGTACCCCTA[T/A]GAAACTCTCTTCCGCAGTCAGCACTATGCTTTGCTGGATAATGGCTGTCG
Long Flanking Sequence:
AAGGGGGGCAATATTGAGCCCCGCAGAGCTGGAGGGGCCCATACTAATCCCACATGCTGCTCAAAGAGGAGACTCCAGAGTAAGTGATCTATTGCTGTACAAATCTTCCAGTTGCTGCCATGGAAAAGATGCATTTCATACTTTTAATTTCATGCTATTCTTTCTTAGTCAAAGATAGAAACCTGGTAGAAGATAAAACAAGATAAAAACATGCAACAGTTTTTTTTAAAGACCTAGTGGAATTCACCACAGTATAAATGTTGCCAGCATCAAGATAGTTGAAAGCATATACCCAAATTAATTTGCAATGCAATAGGCTTGACAGCAAATGTAATTCTGTTCCCATCTTTCCAAGCTGTTTTACAATACGTGTACCTAAAAGTAGCATTTTAAAGCCAAAATAGGGTTTATATAAATGTTCATTTAGTAAATGTGTCTGTTTGTGGCTCATAACAGTATTTTGTCTCACTCATTTCTCTTTGTCTCTGTCAGTACCCCTA[T/A]GAAACTCTCTTCCGCAGTCAGCACTATGCTTTGCTGGATAATGGCTGTCGAGAATTCCTGTTCTTGTCTGATTTTTTCATGGTGGCAGGGAATTCAGCACTGGACTTGTTCAACAGCATTATGGGAAAAACACTCAGCATTTTTTTGGTACATTTATTCTCTTACTACAATCTGTGTATTTAAAGGAATGTCACATTACTGAGTATTTGTTTTCTTTTTTTTTCTTTTTTTTAGCATTCTCTAATTTTATTAATAATAGTTTTTTTTCTACCTGTAGAAGAATCTGTCTACATACTTGTCAGACTGTTACGATAGTATTGCAGTATTTCTCTGCATTCACATCATTCTGCGCTTCAGAGCCATCGTAGCCAAGAGGAATATCCCTGCACTTGACAAGTCAGTCCCTGTCAGTACAAACACATTCTTATACCCCTTATTGGTAGTTTTTTTTTTTTTTGATCAAAAATACACCATCAACAATTACTAAAAAAACTTAAAAG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa18372
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000047190 Nonsense 396 724 12 20

The following transcripts of ENSDARG00000009175 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 19 (position 18330862)
Other Location(s):
Assembly Chromosome Position
GRCz10 19 19176097
GRCz11 19 18638950
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ATGAAACTCTCTTCCGCAGTCAGCACTATGCTTTGCTGGATAATGGCTGT[C/T]GAGAATTCCTGTTCTTGTCTGATWTTTTCATGGTGGCAGGGAATTCAGCA
Long Flanking Sequence:
CCACATGCTGCTCAAAGAGGAGACTCCAGAGTAAGTGATCTATTGCTGTACAAATCTTCCAGTTGCTGCCATGGAAAAGATGCATTTCATACTTTTAATTTCATGCTATTCTTTCTTAGTCAAAGATAGAAACCTGGTAGAAGATAAAACAAGATAAAAACATGCAACAGTTTTTTTTAAAGACCTAGTGGAATTCACCACAGTATAAATGTTGCCAGCATCAAGATAGTTGAAAGCATATACCCAAATTAATTTGCAATGCAATAGGCTTGACAGCAAATGTAATTCTGTTCCCATCTTTCCAAGCTGTTTTACAATACGTGTACCTAAAAGTAGCATTTTAAAGCCAAAATAGGGTTTATATAAATGTTCATTTAGTAAATGTGTCTGTTTGTGGCTCATAACAGTATTTTGTCTCACTCATTTCTCTTTGTCTCTGTCAGTACCCCTATGAAACTCTCTTCCGCAGTCAGCACTATGCTTTGCTGGATAATGGCTGT[C/T]GAGAATTCCTGTTCTTGTCTGATTTTTTCATGGTGGCAGGGAATTCAGCACTGGACTTGTTCAACAGCATTATGGGAAAAACACTCAGCATTTTTTTGGTACATTTATTCTCTTACTACAATCTGTGTATTTAAAGGAATGTCACATTACTGAGTATTTGTTTTCTTTTTTTTTCTTTTTTTTAGCATTCTCTAATTTTATTAATAATAGTTTTTTTTCTACCTGTAGAAGAATCTGTCTACATACTTGTCAGACTGTTACGATAGTATTGCAGTATTTCTCTGCATTCACATCATTCTGCGCTTCAGAGCCATCGTAGCCAAGAGGAATATCCCTGCACTTGACAAGTCAGTCCCTGTCAGTACAAACACATTCTTATACCCCTTATTGGTAGTTTTTTTTTTTTTTGATCAAAAATACACCATCAACAATTACTAAAAAAACTTAAAAGAATTGTTTTGCTCTCGAATGTGCTTCTGGCTTGTTACTTTTCAAATATT
Associated Phenotype:
Not determined