ZMP

rxrba

Ensembl ID:

ENSDARG00000078954

ZFIN ID:

ZDB-GENE-980526-436

Description:

Retinoic acid receptor RXR-beta-A [Source:UniProtKB/Swiss-Prot;Acc:Q7SYN5]

Human Orthologue:

RXRB

Human Description:

retinoid X receptor, beta [Source:HGNC Symbol;Acc:10478]

Mouse Orthologue:

Rxrb

Mouse Description:

retinoid X receptor beta Gene [Source:MGI Symbol;Acc:MGI:98215]

Alleles

There is 1 allele of this gene:

Allele Name	Consequence	Status	Availability
sa43215	Nonsense	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa43215

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

T > G

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000009755	Nonsense	412	471	12	13
ENSDART00000104794	None	None	106	None	4
ENSDART00000112245	Nonsense	379	438	13	14
ENSDART00000132887	None	None	261	None	8
ENSDART00000136528	Nonsense	412	471	12	13

The following transcripts of ENSDARG00000078954 do not overlap with this mutation:

Genomic Location (Zv9):

Chromosome 19 (position 7872875)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	19	7331414
GRCz11	19	7250339

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

AGTGAAGTGGAGTTACTAAGAGAGAAGGTCTATGCATCGCTGGAGGCCTA[T/G]TGTAAACAGAGATATCCTGACCAGCAGGGAAGGTGCACAACATGATTTTT

Long Flanking Sequence:

ATTTTAACTTAAATAACAAAAAAATATTTTTAAACCAAATGACATGTCCTGACTAAGCAAACCGTAGTCATGCGAATGCAACAGAAACATAATCTCCCTCTTTGAGAAGTACAATTATGGAGTATGTGAATCATTTAGTTCCCCTCGTCTGGACATTGAAATGAAGAATTTAATGACAGACTTTACAGCAGTCAAAGTTCAACCAAATTTTTTACTCGTATTCTTGTATACTTATATATGCGTGTTATATAAGTATGTAAATGTGAGTCTATATTTAGATCAAGACACAAGTGAAACACTACAATTCCACAAGTCTTAAGTTCTTATGCTTTCACATTCCACTTTATTGTTATACAAGATTCTTGCTGATCTGCAAAATGTTTGCGTATTCATGATGCATGATGGCAGCTTTTTATTTTATATGCAGATGCAAAGGGATTGTCAAGCCCAAGTGAAGTGGAGTTACTAAGAGAGAAGGTCTATGCATCGCTGGAGGCCTA[T/G]TGTAAACAGAGATATCCTGACCAGCAGGGAAGGTGCACAACATGATTTTTCTCCTTTCTGAAACCCCAGTTCATTGTAATTTGTATGTTTTTGTTATGCAACAAATGATTTAGAAGTGGTTATGATTATAAATTATATATTGAATATTTAGTACATATGTTGCCATTAATATAGCCAATATATAGCTGCTGATATAAATAATTAAATAACCCCAGTAGCAACTGAATGACAGAAGAAATAATCTATTATACTTTTTAAAGGGTAAATCGTGGTGGAAAGTGAGTTGTTACTGTTTCACTGTAATGTCCTGCTGTTATTGTAGCTGAATGCAGTTTCTGTACATGTCGCTCTGTTTTCAGGTTTGCAAAGCTTCTTCTCCGGTTGCCAGCATTGCGCTCCATTGGCCTCAAGTGCCTGGAGCACCTGTTCTTCTTCAAGCTGATTGGAGACACCCCAATCGACACCTTCTTAATGGAAATGCTTGAAGCGCCTCATCAGCT

Associated Phenotype:

Not determined