ZMP
chka
Ensembl ID:
ZFIN ID:
Description:
choline kinase alpha [Source:RefSeq peptide;Acc:NP_001038330]
Human Orthologue:
CHKA
Human Description:
choline kinase alpha [Source:HGNC Symbol;Acc:1937]
Mouse Orthologue:
Chka
Mouse Description:
choline kinase alpha Gene [Source:MGI Symbol;Acc:MGI:107760]
Alleles
There is 1 allele of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa43097 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa43097
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000060015 | Nonsense | 223 | 400 | 5 | 11 |
| ENSDART00000060184 | Nonsense | 241 | 418 | 6 | 12 |
Genomic Location (Zv9):
Chromosome 18 (position 20917174)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 18 | 21147397 |
| GRCz11 | 18 | 21136463 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACCTTCACCAGGGAACCTCATCTGCGAAACTTCTCTCGCATTTTGAGCTA[C/A]AACTTGCCTCAAGAGATGGACAATCTCAAGTAAATCTTTAAAATATTGAT
Long Flanking Sequence:
AAACTAAAAACTGTTATATGATTCCTCATGATAATACTGTGCCATTGGAAAAAAATCGTAACCCTGTAAAAGTCTAAAATTACATTCTTTTTGGTCTTAAAAGGGTCTTGTTAAGTCTTAAATTTGACTTGATGAAACCTGTAGAAACCCTGTAATCGTCTGTAGTAGTTTTGAACACCTTGATTAGTTGGATCAATTATGTTTGATTAGGGTTGGAGCAAAACTGCAGAGCTGCAGCCCTCCAGAAATCAAGATCTATTTTTTTTAAAGAAACTTCCCATTAATGCACAGGGAAGTGACAGTATTAAGTTTCAGTGTTAATTTTAATAACATTTCACAAACAAGTGTCACTATCTGTATTTGCATATTGATTACCTTTTCTGATGGCAGCGCTGCAATCATTTGCATTTTCTTCCACTTCACAGGTACATGGATCAAGTGCTTCAGCTCACCTTCACCAGGGAACCTCATCTGCGAAACTTCTCTCGCATTTTGAGCTA[C/A]AACTTGCCTCAAGAGATGGACAATCTCAAGTAAATCTTTAAAATATTGATCAATCAGTATAGTTTTCACTTCTGTTTCAGGGGTGTTATCTCCTTGCTATATTGAACTGCTTAATCAAGAATCCTGTAAACTGTTCACACTTTCACAGATTCAAGAGCAACAGATATTGCGTTGATAAAAGTACAAGGTGTTTGCTTTATATTGACCTCATTTGTATGTTGACTTAAATGGCTGTTTGTGCACACAGGTGCCTACTTGAATCTACCCCCTCTCCTGTTGTTTTCTGCCACAATGACCTGCAAGAAGGTGAGTTTACCTACAAGTGACTGCCTGTATTTTGATTTTGTTAATTTGTTTCTATAAATGACCAACTTAATGTTTAATGAGCTGTTTTAAGAAAGCTGATTTTTTTTCTAACAGGAAATATCTTACTTCTGAATGGCCGTGAGAACACAGACAGACAGAGGCTCATGCTGATTGACTTCGAGTACAGCAGCTAC
Associated Phenotype:
Not determined