Busch Lab

ZMP

si:ch211-238a12.4

Ensembl ID:
ENSDARG00000007461
ZFIN ID:
ZDB-GENE-050420-284
Description:
Novel protein similar to H.sapiens SRGAP1, SLIT-ROBO Rho GTPase activating protein 1 (SRGAP1) [Sourc
Human Orthologue:
SRGAP1
Human Description:
SLIT-ROBO Rho GTPase activating protein 1 [Source:HGNC Symbol;Acc:17382]
Mouse Orthologue:
Srgap1
Mouse Description:
SLIT-ROBO Rho GTPase activating protein 1 Gene [Source:MGI Symbol;Acc:MGI:2152936]

Alleles

There are 8 alleles of this gene:

Allele Name Consequence Status Availability
sa23247 Nonsense Available for shipment Available now
sa16150 Nonsense Available for shipment Available now
sa32190 Essential Splice Site Available for shipment Available now

Mutation Details

Allele Name:
sa23247
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000088908 Nonsense 339 1073 7 22
ENSDART00000140403 Nonsense 172 929 3 18
Genomic Location (Zv9):
Chromosome 18 (position 12398361)
Other Location(s):
Assembly Chromosome Position
GRCz10 18 12981090
GRCz11 18 12949808
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCATGGAAATGTACCCGACCGCCTTCTGCCCTCCCGTCAAATTTGAGTTT[C/T]AGGCACATATGGGAGACGAGGTCAGTTTTAATTATAATTTTGGATTAAAC
Long Flanking Sequence:
ATTTTATAATGCAGCGAATATTACTTACAGATTTGAGAAACCCATTTGCAGTGCTGTTTTAGTATAACTAATGCTTTATTTTGTCAGCATGCATTAAATCTGGTTTTGTTTTAATTTTATATTTAATTTTACTTTTTTATTTAGTCATCAATAATAACACCGCATTCTTTTTAATTGATGAAATACAGATACAGATAAAAGAAGAATCATTTTAAATCACTCTTGAAATCTCATAACCTACATCGTTAATTAGTGACTTTTTATTCTCTTTTTTTTGCCCTCCCTTTCTTCCTGTACAGTGTTGTGATCTGGGATATCATGCCTCTCTGAACCGGGCATTGCGGACCTACCTCTCAGCCGAATATAACCTGGAGACGTCCCGTCACGAGGGCCTGGACATCATAGAGAATGCAGTGGACAGTCTGGACCCCCGTAGTGACCGCCAGCGCTTCATGGAAATGTACCCGACCGCCTTCTGCCCTCCCGTCAAATTTGAGTTT[C/T]AGGCACATATGGGAGACGAGGTCAGTTTTAATTATAATTTTGGATTAAACCAATGTAAACTCAAAGTGAGAATGTAAATATAGTTGTTATTTTTTTCAGTTTAAGACATTAATGATATGTCATACTATATTTTATACTATAATGTTTGGCTTATTTATTTTAAATTGCCAGGCATGTCAACTTTTAGATCTCAGCTTAGTTCCCTTATTCCACAGCGGAATGAACCGCCAACTAATCCAGCATATGTTTATGCAGCCGATGCCCTTTTAGCAGCAACCCAGTACTGGGAAACACTGTACACTCTTATTTATTCATACACATACAGTACACTACGGACAGCTTACCCAATTCACCTATAGCGCATGTCTTCGGACTGGAAATCGAAGCATCCGGAGGAAACCCATGCAAACAGGGAGAACATGCAAACTCCTACCAGAAATGCCAACTGACCCAGCTGAGGCTCAAACTAGCAACCTTCTTGCTGTGAGGCAATCGTGCTA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa16150
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000088908 Nonsense 400 1073 9 22
ENSDART00000140403 Nonsense 233 929 5 18
Genomic Location (Zv9):
Chromosome 18 (position 12379956)
Other Location(s):
Assembly Chromosome Position
GRCz10 18 12962685
GRCz11 18 12931403
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TCTGAGGCRACACTTACTACCATCCAGGACATGGTGACGGTTGAGGATTA[T/A]GACGTATCTGAAWRTTTCCATCATAGCCGCTCAACTGAATCAGTTAAATC
Long Flanking Sequence:
AAGATGAGAATGAAATTGGTCACTTACACGAAAGCACAGACTCAATATTTGAGTCAACAGACAACAAAACCACAAAAAACATTAGAATTACACAAAGTTTTTATTTTAAAGCGGAGAAATGGACTCTGTTTTACTATTGTAGATTATAATCCGTAATGATGAATATGCACTTCAGCTCAATAATTATGACTAAGCTGCAATTTAATGAAACCCTATTGACTATTTTTAAAAGGGGGAGGAGCTACATATTTAATTTTCACAAAGTTTTGTATTCCAGAGCACTTTAGGCGACCTATAATGTATTTTTCTAGCACTTTTGACACACCTTTTTATTAATCAATGTTGCAGCTATGTACTGGACTAAAGTAGCCATTAGTGGTCATTGATATTCTGTATGTGAACTTTGTCATTCCAGCTAAAAATGACTTTATATTTCAGATCAAGAAGACGTCTGAGGCGACACTTACTACCATCCAGGACATGGTGACGGTTGAGGATTA[T/A]GACGTATCTGAATGTTTCCATCATAGCCGCTCAACTGAATCAGTTAAATCTACCGTGTCTGAAACCTACCTCAGCAAGCCGAGCATCGCCAAGAGACGCGCCAACCAGCAGGAGACTGAGCAGTTCTATTTTATGGTCAGTATGCTTCAATCTGTTGTTGTTTTAGAATGTTTTTTTTTTTTTTTTGACTTTTAAAAATAGTTCAACAAATGTCAATATATATCAATATGTATCAATATTTCCAGTATATATATATAATAATATATTATATATTAAATATATTATATATATAACAATAATAAATAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTATTTATTATTGTTATATATTTAATATATTTATTATTATTATTATTAAACCCATATGTATTGGGTTTTACTGTGCTCAAATTGGTTTGGTTACTCAAATTAAGTTCACAGTTCATTAGTTTTTGAATTTAAATGG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa32190
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000088908 Essential Splice Site 783 1073 19 22
ENSDART00000140403 Essential Splice Site 639 929 15 18
Genomic Location (Zv9):
Chromosome 18 (position 12337595)
Other Location(s):
Assembly Chromosome Position
GRCz10 18 12920324
GRCz11 18 12889042
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AATGGCATAGATGGACTCGTGCCTCACCAGTACATTGTTGTTCAGGATAT[G/A]TGAGTATCTGAACTGTTTAGTCAGCAAAATAAAACTTCACTGTAATGACT
Long Flanking Sequence:
GGATATATTTTTCTTCTTTCTACATTATATTACTTCAAACTACTAAAATGTCAATAAAATTAACAAAAATTAAAAGTCGACAGAGCTACAATCAAGCACCCATAATGCAATTCACAACCGTAAATAAACAGAAAACACAAAATACAGAAACTGTCAATTTACAGATATTTTTTTTACAGTGTACAAGCAAGAGTCAAAATCCAGAATGCTTTCATTTGCAGCACGGAGCTGATTTTTCAAAGACACATTCTGGGGACACCAAAGATAAAATTGTTATTTATTTATTTTAAACGATGCTTTGTGTTTGTGTGTTTTACAGAGGGAGAGCCCATTGAAGCCATCGCCAAGTTCGATTACGTGGGCCGCTCTGCGCGGGAGCTGTCATTTAAGAAGGGGGCATCTCTGCTGCTGTACCAGAGAGCATCCGACGATTGGTGGGAGGGCAGACACAATGGCATAGATGGACTCGTGCCTCACCAGTACATTGTTGTTCAGGATAT[G/A]TGAGTATCTGAACTGTTTAGTCAGCAAAATAAAACTTCACTGTAATGACTGTAATGATTCATATCTCAAGGAATGAAATGAAGGAACTAAAATGAATTTAAATCATGTTTGATACACTTTTACATTTAATACAATATACAATTAAATTTACATTGAATACAATATAACATATCTTCATCACTTTTTAAATTTGGTATTATTAACATTTTTAAACATTTTAAGCAAAATTTCAATTAATATTTTTTGAAATCTAAAAAATCACCTAATTTTTTTTCTAACTCAGGGCTTTGTTGAAGCAGTTTTGAGCTTATTAAATTATTAAATGTAAAAAATAGGGAAAAATGTAAATATGAAGAGTACAGATACAAAAACCTTCAAGTACCATCTGAAATTTTCTTTAAAATGAGCATTTTTCTCACTGCAGTTCTATTCATCTTAATTTCTATAGCGCTTTTACAATGTAGATTGTGTCAAAGCAGCTTAACATAGAAGTCCTAATA
Associated Phenotype:
Not determined