ZMP

zgc:171531

Ensembl ID:

ENSDARG00000075107

ZFIN ID:

ZDB-GENE-030131-6336

Description:

NK2 homeobox 4 isoform 1 [Source:RefSeq peptide;Acc:NP_001104636]

Human Orthologue:

NKX2-1

Human Description:

NK2 homeobox 1 [Source:HGNC Symbol;Acc:11825]

Mouse Orthologue:

Nkx2-1

Mouse Description:

NK2 homeobox 1 Gene [Source:MGI Symbol;Acc:MGI:108067]

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa42985	Nonsense	Mutation detected in F1 DNA	Not yet available
sa32169	Nonsense	Available for shipment	Available now

Mutation Details

Allele Name:

sa42985

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

C > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000110871	Nonsense	229	345	2	2

Genomic Location (Zv9):

Chromosome 17 (position 42211780)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	17	42107190
GRCz11	17	42096064

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

GCTACAAGATGAAGCGACAGGCCAAGGACAAAGCAGCGCAGCAGCTTCAA[C/T]AGGAGGGCAACCTGTGTCAACAACAGCAGTCGCCGAGGAGAGTGGCTGTC

Long Flanking Sequence:

GCCATGATATATATTTTGGCTTAAGTTACAGTTACAGTTTAAACCTTTTTATTCACTCTCTTGTGCATGCGTAAATGCTGCATTTAGACGAGCCATTGTTGTATTTCTAAACACACTTATAGTAAAAACTTTAGACCAACACTGCTACTAATTGAATGGCCGTACATCTGTATGCATATTTTGAAGTTTCTAGATTCATGGGACCTTCCACAGGTATGAACATGACAGGAATGGGCACGCTGACAGGCATGGCCGACACCACCAAATCCATCCCACCTCTACACGCAGCGCCAAGGAGGAAACGACGGGTGCTCTTCTCTCAAGCACAAGTCTACGAACTGGAAAGGAGATTTAAGCAGCAGAAATACCTTTCAGCGCCGGAAAGGGAACATCTGGCTAGCATGATACATCTCACCCCGACGCAGGTCAAGATCTGGTTTCAGAATCATCGCTACAAGATGAAGCGACAGGCCAAGGACAAAGCAGCGCAGCAGCTTCAA[C/T]AGGAGGGCAACCTGTGTCAACAACAGCAGTCGCCGAGGAGAGTGGCTGTCCCTGTCTTAGTGAAGGATGGCAAGCCTTGCCAAAACGGTTCCAACACGCCGACGCCAAACCAACAGCAAATGCAGCAGCAGCAGAACGGAGGAGGGGTCGTGCTTCCTACCTCGAGCAATTCTATGAACCAACACCAAAGCCAGCAGGTCAACGCACTGGTCCAGGCCCAAGACCTGGAGGAAATGTCCCCTAGTCCGCCGTCACTTCATTCGCAAATGAACAGTATGGGCCAGATAGACACTTCTGTAGATTACACAAATAATATGGTCACGTCAAATCTGCTTTATGGCAGAACGTGGTAGAAGACCAGCTATTTTTTCTCCTTCGCTTCTTCTCCACCCATAAACTTAAAAATGATCTGAATTAAGGACTGCGCTTGAGGCCAAAAGCAGGCACGCCGTGTACCCGCGTGAAGATTTAAAGCGGGTGTTCGGATCAAAGGAGTGGGT

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa32169

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC

Mutation:

C > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000110871	Nonsense	270	345	2	2

Genomic Location (Zv9):

Chromosome 17 (position 42211657)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	17	42107067
GRCz11	17	42095941

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

AGCCTTGCCAAAACGGTTCCAACACGCCGACGCCAAACCAACAGCAAATG[C/T]AGCAGCAGCAGAACGGAGGAGGGGTCGTGCTTCCTACCTCGAGCAATTCT

Long Flanking Sequence:

AAAAACTTTAGACCAACACTGCTACTAATTGAATGGCCGTACATCTGTATGCATATTTTGAAGTTTCTAGATTCATGGGACCTTCCACAGGTATGAACATGACAGGAATGGGCACGCTGACAGGCATGGCCGACACCACCAAATCCATCCCACCTCTACACGCAGCGCCAAGGAGGAAACGACGGGTGCTCTTCTCTCAAGCACAAGTCTACGAACTGGAAAGGAGATTTAAGCAGCAGAAATACCTTTCAGCGCCGGAAAGGGAACATCTGGCTAGCATGATACATCTCACCCCGACGCAGGTCAAGATCTGGTTTCAGAATCATCGCTACAAGATGAAGCGACAGGCCAAGGACAAAGCAGCGCAGCAGCTTCAACAGGAGGGCAACCTGTGTCAACAACAGCAGTCGCCGAGGAGAGTGGCTGTCCCTGTCTTAGTGAAGGATGGCAAGCCTTGCCAAAACGGTTCCAACACGCCGACGCCAAACCAACAGCAAATG[C/T]AGCAGCAGCAGAACGGAGGAGGGGTCGTGCTTCCTACCTCGAGCAATTCTATGAACCAACACCAAAGCCAGCAGGTCAACGCACTGGTCCAGGCCCAAGACCTGGAGGAAATGTCCCCTAGTCCGCCGTCACTTCATTCGCAAATGAACAGTATGGGCCAGATAGACACTTCTGTAGATTACACAAATAATATGGTCACGTCAAATCTGCTTTATGGCAGAACGTGGTAGAAGACCAGCTATTTTTTCTCCTTCGCTTCTTCTCCACCCATAAACTTAAAAATGATCTGAATTAAGGACTGCGCTTGAGGCCAAAAGCAGGCACGCCGTGTACCCGCGTGAAGATTTAAAGCGGGTGTTCGGATCAAAGGAGTGGGTTTTTGGGGGTGAGACATTTGTCACTTTTTCTCTAAAAACAATTTTTTGTGGTCACAGTTTTCTACGATGACCCTTCTACTCATTATGGACTAAATAATTTCTAGCCTCATACTGTATGTTTTG

Associated Phenotype:

Not determined