ZMP
vax1
Ensembl ID:
ZFIN ID:
Description:
Ventral anterior homeobox 1 [Source:UniProtKB/Swiss-Prot;Acc:Q801E0]
Human Orthologue:
VAX1
Human Description:
ventral anterior homeobox 1 [Source:HGNC Symbol;Acc:12660]
Mouse Orthologue:
Vax1
Mouse Description:
ventral anterior homeobox containing gene 1 Gene [Source:MGI Symbol;Acc:MGI:1277163]
Alleles
There are 2 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa42915 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa42915
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000031490 | Nonsense | 122 | 317 | 2 | 3 |
Genomic Location (Zv9):
Chromosome 17 (position 21269097)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 17 | 21419246 |
GRCz11 | 17 | 21439082 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACAGACTGGAGATGGAGTTTCAGCGGTGTCAGTATGTTGTGGGACGGGAA[C/T]GAACTGAACTTGCCCGGCAACTTAACCTGTCTGAAACTCAGGTACACATT
Long Flanking Sequence:
TAGCATTTTTCTGCTTACAGATTTTTTGTAAGAGTATGTAATTTTTGTTTGTTAATAAAATAATATTGTACTAATCAGCATTTGTTTGGCATTTATATTGCAACAACAAAAACAGCATTCAGGCAGGACAAGGGTTTATTTAATAAAAACATCAAATGCTTTGGTTATTTAGCAATCGAAATTGTGCAATGTTTAATACGATTTGCATGACTACCAATATTAATTTCTCAAAAGAAAAAGCATTTTAGCATTTTTTAAAACTTATAACATATTCTGCTTATCTCAAGTAATTTTAATAATAGTCTTATAGCAGGTATGACAATTTTCTGAACACATTTTCCTCTTCACATGTAGATGCCAAAGGGTCGATTCGAGAAATTATTCTCCCCAAGGGTTTGGATCTAGACCGACCAAAGCGCACTAGGACCTCGTTCACAGCAGAGCAACTATACAGACTGGAGATGGAGTTTCAGCGGTGTCAGTATGTTGTGGGACGGGAA[C/T]GAACTGAACTTGCCCGGCAACTTAACCTGTCTGAAACTCAGGTACACATTCGAATGCAAATAGTGATACACAAACACTATTGCAAATACATTATAAAGACCACTGAAGACAGCCACTGCCATACAATTGCAAAATAATTAATTTGCCTCTCACAAATATGTCTTTCCACGTGACTCATGTCTGATGCACTAGCATAATTATTATTCAATGTATAAAGAAGTGCATTGCGGAGGCTCTTTACCAAAACACACAGAGCTACCTGAAAATAAAATGCACTTACTTCATGATATTAATATTTCATTTATTTGCATTTTGATCACCCTAAGGCAACCTAAAATATCAACAATCTGATCGCATTTTGTTGTTTCTGGACAATTCCCTTTTTCTGCCCTCTTCAGCAGTGCAATAGTTTGATGGTCTGTTAGTGGCATAAAGGCCCGCTTTACAAAAATAAGCCTAGTGATGCATTTGCGGCACATGCTTTGCACAGGGGTCAGTAA
Associated Phenotype:
Not determined