ZMP

LOC100333695

Ensembl ID:

ENSDARG00000090946

Human Orthologue:

NLRC5

Human Description:

NLR family, CARD domain containing 5 [Source:HGNC Symbol;Acc:29933]

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa42851	Essential Splice Site	Mutation detected in F1 DNA	Not yet available
sa42852	Nonsense	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa42851

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

T > C

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000113401	Essential Splice Site	50	1175	1	10

Genomic Location (Zv9):

Chromosome 17 (position 4168033)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	17	4242868
GRCz11	17	4400993

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

TCCTGAGCCCTCCTGAATTCAGTGACGGAGCAGTGACATCTGTCCCTGAG[T/C]GAGTTTAAAAACTTTGATTTAACTGTATATATATATTGAGTGAATGGCCA

Long Flanking Sequence:

TGTTGCTTTGTATTTGTTATCTGTTGATGTTTTCTTGTATTTGTATGATTTTTGCATATTCTAATAAAAAAAAAAAAAAGATGCAAAAACCTCTAATTGGCGTCTGATTTTTTTCTCTAAAATTAGCATTTTTATCAGGCTCCTGTGTGTATGTTCCATAATATCACTTTTATCGCAAAAAAATAAGCCTTTTTCCTGGTCTTTAATGTGAAATATCTCAACATAAACGAAGGAGGCTGAGAAAAATGTTCATTTTTGATGGAAATTTTAGACGATATTTAGAGGTTTTTGCATCTGAATTCTTTTTATTAGTATTTCTTTTATTTTATTTGTTCTGCAGTTCTTTTAAAATGAGTGTCTGCGAGAAGAGAGAGAAGGAGGAGGATGTGCACATACACAAACCAGCATCTCCAGAACCCAGCTGTGTGTCTATAAAGAGTAACAGATCTATCCTGAGCCCTCCTGAATTCAGTGACGGAGCAGTGACATCTGTCCCTGAG[T/C]GAGTTTAAAAACTTTGATTTAACTGTATATATATATTGAGTGAATGGCCATTTACATATCTTGCATATCTCAATAATGTACATTACATATATGTGTAGCTAGGTCATAAACTTGCTTCAAAACTCTAAGGACAGTTGTAACACTCTGACTTTGTGTGTTTAATTTAAAATGATCGTCTTGTCCTTTTTACTGAAAACATATCAGTTGTATTATTAATTGGTGCACCTATGTTTGTATCTTGTATTAAAAGATGACCAAACTAGTGTATTTCTATTAGTCTGTGTGTTATGTAGTAAAATAAAAGTTGACCCCAGTTTTCCCTAGCAGTTTTAGGACTTTGTTGTCAAAACATTTGAAGAATGAAGATATGAAATGTTCTTGCAGCGCTGCCTGTACAAAGAGTCTCTATAAGGATGTTCAGACACACAAAACAAAATCTTCAGATCTCAGCTGTGTGTCTATAAAGAGTGACAGATCTATCCTGAGCCCCCCTGAATTCA

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa42852

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

T > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000113401	Nonsense	857	1175	6	10

Genomic Location (Zv9):

Chromosome 17 (position 4174928)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	17	4249763
GRCz11	17	4407888

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

GACCTGCAGGATTCAGGAGTGAAGCTGCTCTCTGATGGACTGAAGAGTTG[T/A]CAACTCAACACACTGAGGTAAGAAAGAAGGATAAAGATTTGTTTGGGTAT

Long Flanking Sequence:

AATTGTTTTACAACACATACAATTTTGTCTTTTATTACAGTAAAATATATGAACTGTACCTGTAATTTTACCTGCTCAAAGAAAACACTCTTTTTAAATGTGGCAGAGCACATATACGATAAATCACGACAGTAACTAAAAATGACTATGATCCATTACTGAATCAATGCATCTGCATCTGCATCTTGGTGCATTGTAGAAACAATTCATTTCGACACTCCATGTTATGATGTACTGAAACTTTACTGACAACATAACATCAAATTGAACAGAATCAATGACATGATAATCAGAAGACTTGGGACTTCCCTGATGTGAACCCACCATCTACTTTTTTTCATCCTATGTTATAGACTCATTGCCTGCAGTCTCACTGGTCAGTGCTGTGAAAGTTTGTCTTCATGTCTACAATCCTCAAAATCATTGATGGAGCTGGACCTGAGTCACAATGACCTGCAGGATTCAGGAGTGAAGCTGCTCTCTGATGGACTGAAGAGTTG[T/A]CAACTCAACACACTGAGGTAAGAAAGAAGGATAAAGATTTGTTTGGGTATGAAATGAAAAAGACCCATTGCAATGGTACCTAATCTGAGAGTTTGTATTAAATCAGCAGAACGACATAAGATTTTGGGATTGTTGTTTGGGATTGATCTGTTGTGTTAAATATTCTTTGGTCTTCAAAACCATAAAAAACACTGATGCTAATTTAACCATTGAAAATATCAATGTACAGAGTTTTGACATGCTTGCTATATTATATGTGTATTTATGTTTTGCTATGTATTTCTGCATGGATGAAAGGGCTATAATATATTATAATATCTTAGCCTTATTTCTGTAGATTATTCAGATTTACTCCAGATGGTAATTTAAATATTATCCATTTGAATGTTATCAATACTAGGTTTAGAAAATAAAAGACAGCCACTTCATCTGTACTAAACAATATTTCAACCTGTGTTATAGACTCATTGCCTGTAGTCTCACTGATCAGTGCTGTGAAA

Associated Phenotype:

Not determined