ZMP
CSMD3 (1 of 2)
Ensembl ID:
Description:
CUB and Sushi multiple domains 3 [Source:HGNC Symbol;Acc:19291]
Human Orthologue:
CSMD3
Human Description:
CUB and Sushi multiple domains 3 [Source:HGNC Symbol;Acc:19291]
Mouse Orthologue:
Csmd3
Mouse Description:
CUB and Sushi multiple domains 3 Gene [Source:MGI Symbol;Acc:MGI:2386403]
Alleles
There are 13 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa17498 | Nonsense | Available for shipment | Available now |
| sa16830 | Essential Splice Site | Available for shipment | Available now |
| sa22951 | Missense | Available for shipment | Available now |
| sa22950 | Essential Splice Site | Available for shipment | Available now |
| sa22949 | Nonsense | Available for shipment | Available now |
| sa9590 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa17498
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000006458 | Nonsense | 111 | 2896 | 3 | 60 |
Genomic Location (Zv9):
Chromosome 16 (position 51167151)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 16 | 48021125 |
| GRCz11 | 16 | 47957889 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GTGCCTGATTTTTTTTCTTCTTTTTTTGTTTTGTTTCCTGAGCARTGAAA[C/T]GATCTGGGGATTTTAAGTCAAGAGGAGTCAAATTAYTACCTGGAAAAGAC
Long Flanking Sequence:
CATTTTGATTTCGGGTCACATTTTGACCCCGACAGCTTTCATTTGATTCACCTCTTCCTTAAAAGTAATTACATGTAATATTGGCTAAATCTCGAATCACCTTGCTACTCTTAATCAGCTGATAATTACAATAAATGACTTAATTTCTCATAATGAGGAGCGGAAGGTGGCATGTCAGAAGTTGAATCAAAGCCTGGTCCACAAGTTATTAATTAATTAATTTATTTTTAATTCAGTTGTAGAAATGTAGAAAATTTCAGAGATGAAGGAAGCACAGCATAAGTGTAGAGAGAGAGATAAATTATGAATTGAATGAATAACTTTAAACAGAACCTGGCTGAGATGAGCCAATTTGTTTTGACATTTTAACTTGTTTTCTAATTAACATTTTTGAAACTATTGCTCATGTTTCTGCAGCAGGCTTTAAAAAATCTAATCTACATTTAATGTGTGCCTGATTTTTTTTCTTCTTTTTTTGTTTTGTTTCCTGAGCAGTGAAA[C/T]GATCTGGGGATTTTAAGTCAAGAGGAGTCAAATTATTACCTGGAAAAGACAACACAAGCAAGTTTTCCATCAGTGAGTATGTTTTCATTGTCTTTGTGCAATAAAGTGGCAAGCAATTTTGTAGAACTTGATGTTCTCCCTGTTGAGACAGAATGCACAAGCATACTGCCCGAAAGGCGTTTCAAAGATGGCCGCTAAGTGAAATGACTTGTCTTAAAGGAACTTTGAGTGAACACAGCCACATTTTTGATCACAAAAAAAAAAAAAATACATGAATAAATAAATAAATAAATAAATAAATAAATATTTGTTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATATTTTATTTTCATTTATTTTCATTTATTTTATTTTTTGTTTTAGTTTCATTTATTTTGTTGTCATTTATTTTTTATTTTATTTTATTTTATTTTATTTATTTTA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa16830
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000006458 | Essential Splice Site | 1009 | 2896 | 19 | 60 |
Genomic Location (Zv9):
Chromosome 16 (position 51083292)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 16 | 47937266 |
| GRCz11 | 16 | 47874030 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TATTCTGACCAAGAGGACACGGCTGAGGGATTCAAGCTTGCTTACACTAG[T/A]AAGATTCCTCTTGCTCTCACTTTCTTCCACACCGCTNNNNNNNNNNNACA
Long Flanking Sequence:
ATGTTTGTTGAAAAAATCTTTAACGACATTATTAGAAATCCTTATAGAGTATTTGTCTGAAACACTTGTTGAAAATTAGTTTTACATAAAAAATCTTAGTTTTAGTTTCAACATATAAACATAAATAAAACTCAATAGCAACTATATAACCAAAATAATAACTTTTATATTTCCTATATTATATAAAACTATAACAACTCCATAACGTTTATATAACCAAGATGAAAATTACACTTGAAAAGAACTTCAGAAAACATCCTTTGAACATTTGCATAACGTTCCTACAACACATTTAATCTGTGCATAGAAATCGCCAGAGATTTTTCTGTTTTCTCTCCCCAGTTGTATGACGGTCCGGACAACACTGCAGATGTTCTAGGAGCTTTCTCTGGGTCCTCCATGTTGAGTCAGTCACTGACCAGCACGTCGAATCACCTGTGGCTTGAGTTTTATTCTGACCAAGAGGACACGGCTGAGGGATTCAAGCTTGCTTACACTAG[T/A]AAGATTCCTCTTGCTCTCACTTTCTTCCACACCGCTTGTGGAAAACTACAGTTTGAAATATTTTTCCTCCGTCTGTCACGACTAGTCTTACACTACATGACTTCAGTAGCTCTTTGCAGGCTTCCTCCCCGGTGTAGCTTGTGGAGTGAAAATAAAGTTTGGGTTCAGTTGAGGTGTTTCAAATACAACTTAAAAGTCTTCTGAACAGTTTACAGACTCCTCAAACTAGTCGAGTGTCGCCCACAAGCGATCAGATAATCGAGTGGGACACACAGCATCAACTTGGCTTGACTAATATTTCATACTTGATGAGCTTTGATGATAATTCAATTCAGCCCTGCTAAGACTGCAGATGACTGTACTTTTATTAGTCCCATCAGGAATTTTATAAAGTTGCAATTTACAAAGGCCTTTCATACAATGCTTCACCATCATTTATTGATAAATGAGAGGCTGCTATGGGAGTGTTACTATGGGAGCATTTTTGGTATCTGACAAGA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa22951
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Missense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000006458 | Missense | 1597 | 2896 | 30 | 60 |
Genomic Location (Zv9):
Chromosome 16 (position 50989486)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 16 | 47843460 |
| GRCz11 | 16 | 47780224 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGGCAGTGCCCAACTCACTCGCCCAGTGGAACGGCACTGTGCCAGCATGT[G/A]TCGGTATGTCCACCCACACACACACACAAATACAAATCTGTCTGCTCAAC
Long Flanking Sequence:
AATCCTGGACTTTTGTCAGGTAGTGTGTGTTACACTAAAACACTTTTTTTTAGCTGCTTCTTCAAAGTAAATATTTAAAATAAGCTATAATGATACAATTCTTGAGTTTTTTTAGGACAACCTAATTGTTTTAGGTTAAATCCTTTTAAATTTGTTAAAACAAGTATGTCAACTTAATCATTTTTATGTTGGGACAACGTAAAGGAATTGTGTGGAACCTAGCATTTATTTATTTTTTATTGTGCAGCCATAATTTGCATGGTGTTTTGAAGTTTACTTTTTTATTTTTTGTTTGTGCAGCTGTTCCGAGGACCAGTGCCTCTCAGTGCAGCTCTGTACCCGAGCCTCGCTACGGGAAGCGCATTGGGAATGACTTTGGATTGGGAACGGTTGTGCTTTTCGAGTGTAACCCAGGTTATACTCTCCATGGTGCCAGTGCCATCAGGTGTGAGGCAGTGCCCAACTCACTCGCCCAGTGGAACGGCACTGTGCCAGCATGT[G/A]TCGGTATGTCCACCCACACACACACACAAATACAAATCTGTCTGCTCAACAGTGCCCCCTGCTGCTGGGGAAGACAGCAGCTATTTAATTTAATTCTAGTTTTTTATTTATACAGTTGTTTATACTGCAAGGAATTTTTCACAGTTTTTCCGCCTAAATTTCTTCTTCTGGAAAAAAGTCTTCTTTATTTCATTTTGGTTAGAATAAAAGAAATTTTTATATTTGTTTTAAAACCAATATGATTAGCCCTCTTATGCACTATATTTTTGAATTGTCTACAGAACAAATCCCTGTTATACAATGACTTGCCTAATTCCCCTAACTTGCCTAGTTAACCTAATTAACCTACTGTAGTTAAGCCTTTTCAGCTCACTTTCACACGAACTACAAATCCGCCATGTTATGGACTACAAGATCCAGTCATGCAACACACACACACAACCGGTTCCTGATACTGACTGATAGCAAACACGCAGCTGATGCTGCTCAAGTACTGATTA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa22950
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000006458 | Essential Splice Site | 1881 | 2896 | 43 | 60 |
Genomic Location (Zv9):
Chromosome 16 (position 50936932)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 16 | 47791007 |
| GRCz11 | 16 | 47726093 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTTCTTTTTCTTTGTTGTTTATCACTTCTTAAAACCAACTGTTTTTCTTC[G/A]ACCATCCAGCCTATGAACTGCAGAGGTGTCCGGATCCACGGCCCTTTCGC
Long Flanking Sequence:
ACTATCATTATTAACGTTACTGTTGTTGTTATTTATTATTATTTTATTTCATTTTATTTTATTTTTAATTTTTAATTATTGATAGTATTAGTCTTTTAAGTTTAACTTGATTATAATTTAATGTAATGTAAATATAATGTAATTTCAATATTAATTTTTTATTTATTTGCATTTTTTGCTAAGTTTTGTGTCGGTCTGTCATTGATTACTGGTGTCCATATAAACGCACTCATTGTTTCAAAACAATGACAATAAAATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTGTTATTTGGCTTAATTAGTATTAGTTATTTGGCTTTGTAACACTTCTAGTATTCCTTTCATTTCATTTTCAGTTTTTTTATTATTATTATTTATGTATACTTCATTGTTTCTAAAGCAAAACCATTTCTTTTTCTTTGTTGTTTATCACTTCTTAAAACCAACTGTTTTTCTTC[G/A]ACCATCCAGCCTATGAACTGCAGAGGTGTCCGGATCCACGGCCCTTTCGCAATGGTGTGGTGATTGGCAGTGATTTTGGAGTGGGCATGACCATCTCCTTCCAGTGTCTGCCAGGATACACGCTGCTGGGTGAATCGTCGCTCACCTGTCTGCATGGTGTCAGCCGAAACTGGAACCATCCTGTGCCTCGCTGTGAAGGTATACTTATCAAAAAATGTACCTTTAATGTGGAGTTTGCATGTTCTCACCGAGTTGACGTGGGTTTCCTCCGGGTGCTTCGCTTTCCCCCACAGTCCAAAGACATGTGCTATAGGTGAATTGAATAAATCAAATTGCCCATTGTTGTTTGAATGTGTATGTGAATTTCAGCGGAAAGGTCGTCAGCTGCTAAATACATAAGCCAGAATAGTTGGCGGTTCATTAGGCTGTGGTGACCACTAATAAATCAAAATCTAAGTCAAAGGAAAATGAATGAATGAATGATTCTGAACTGCCTGATA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa22949
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000006458 | Nonsense | 1938 | 2896 | 43 | 60 |
Genomic Location (Zv9):
Chromosome 16 (position 50936759)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 16 | 47790834 |
| GRCz11 | 16 | 47725920 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTGCTGGGTGAATCGTCGCTCACCTGTCTGCATGGTGTCAGCCGAAACTG[G/A]AACCATCCTGTGCCTCGCTGTGAAGGTATACTTATCAAAAAATGTACCTT
Long Flanking Sequence:
TTTTGCTAAGTTTTGTGTCGGTCTGTCATTGATTACTGGTGTCCATATAAACGCACTCATTGTTTCAAAACAATGACAATAAAATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTGTTATTTGGCTTAATTAGTATTAGTTATTTGGCTTTGTAACACTTCTAGTATTCCTTTCATTTCATTTTCAGTTTTTTTATTATTATTATTTATGTATACTTCATTGTTTCTAAAGCAAAACCATTTCTTTTTCTTTGTTGTTTATCACTTCTTAAAACCAACTGTTTTTCTTCGACCATCCAGCCTATGAACTGCAGAGGTGTCCGGATCCACGGCCCTTTCGCAATGGTGTGGTGATTGGCAGTGATTTTGGAGTGGGCATGACCATCTCCTTCCAGTGTCTGCCAGGATACACGCTGCTGGGTGAATCGTCGCTCACCTGTCTGCATGGTGTCAGCCGAAACTG[G/A]AACCATCCTGTGCCTCGCTGTGAAGGTATACTTATCAAAAAATGTACCTTTAATGTGGAGTTTGCATGTTCTCACCGAGTTGACGTGGGTTTCCTCCGGGTGCTTCGCTTTCCCCCACAGTCCAAAGACATGTGCTATAGGTGAATTGAATAAATCAAATTGCCCATTGTTGTTTGAATGTGTATGTGAATTTCAGCGGAAAGGTCGTCAGCTGCTAAATACATAAGCCAGAATAGTTGGCGGTTCATTAGGCTGTGGTGACCACTAATAAATCAAAATCTAAGTCAAAGGAAAATGAATGAATGAATGATTCTGAACTGCCTGATATCAGTCAGCAGTAATCCATAGATGTTTGTTTCCTTATTTTTAATTTCCCATAGAAAGTATAGAAACATTCTTTCATTAGGAAAAGATGTCCAAGCTTTGAGTAAAATTACAGTATTCATAAAAACATAAAATATGAGGATGTAAAAAATAATAATTACATTGAAAATAAAATT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa9590
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000006458 | Nonsense | 2703 | 2896 | 57 | 60 |
Genomic Location (Zv9):
Chromosome 16 (position 50865044)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 16 | 47719119 |
| GRCz11 | 16 | 47654205 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ACAGGTGTTTAGAAGACAGAGTTTTGATTGGTGAATCCACCCGAGCCTGC[C/T]AACTRAACGGCCAGTGGGGTGGCTCGCAACCTCATTGCTCAGGTAAGATG
Long Flanking Sequence:
AGTTAAGTAAAAGCACCAATGCTGCTCTAAAAATGTATTCAAGAGAAAGTAAAAAGACACGTTTTATTACAATTCCTGAGAAAAGCTACTTAATTACAGTAATTTGGGTATTTGTAATTTGTACCTTTGTACAGCACAAGGACGGGACTTGATTTGTCTTGTTGACATGAGAATGTGAACTTGGTGATGACATGACAACAATCATCCAATCAGAATGTGGCATATTAGCCAAAATAACCAATAAAACAAGAAGCATGAAGTAAAAGTACATGAGGAGTGCCTAAAATGATAGACATTAAAACAAGAGACATGGTGCGTAGACCTATCTGTTTAATTATCATGTCATTTATTTATTTTTTTCTTCTGCAGAGGTGGACTGTGGTCACCCTGGTTCTCCTCCTCATGCGGTTGTAACAGGAGACAAATTCACCTTCGGTTCAACAGTTCACTACAGGTGTTTAGAAGACAGAGTTTTGATTGGTGAATCCACCCGAGCCTGC[C/T]AACTGAACGGCCAGTGGGGTGGCTCGCAACCTCATTGCTCAGGTAAGATGCATCAAATGTTAAAGGTCCCATGACGTACTTCAAATGTGCATTTTTATTCGATGTATATTGTGGAAAATAGTACCTCTTTCCCTCATTGAAAAACAACTTTATCAGTGAGACCGGTTGAGATCAAGTGCATCAAATGAAAAGCAAATGAGAAGTGTCTTGAAGGGGGCGGGGCATGTCAGATACTACAGAGCATTTGATTGGTCAGAAGATTGGATAAGAAACTGAAGTATGAAGGGATGTCTAAAAAATTGTTAGCCATAACATCAATGCCATGCGAAGTCTAAGATTAGCAAGATTTTTATTTTAAATACACATACACACACATACATGTGCACACAGAGAGGAAAGGTTGTGTTGTCAAGCCACCTACCTATATAAAGCACACTCAGAATTGCATGATGTTTTCCCAGAAACATAGAGTGTTTAAAAGAAAGGGTCTGGTGCATATG
Associated Phenotype:
Not determined