ZMP
snx27
Ensembl ID:
ZFIN ID:
Description:
sorting nexin family member 27 [Source:RefSeq peptide;Acc:NP_956834]
Human Orthologue:
SNX27
Human Description:
sorting nexin family member 27 [Source:HGNC Symbol;Acc:20073]
Mouse Orthologue:
Snx27
Mouse Description:
sorting nexin family member 27 Gene [Source:MGI Symbol;Acc:MGI:1923992]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa42715 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa10389 | Essential Splice Site | Available for shipment | Available now |
Mutation Details
Allele Name:
sa42715
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000021092 | Nonsense | 188 | 569 | 3 | 13 |
Genomic Location (Zv9):
Chromosome 16 (position 25744492)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 16 | 23590167 |
| GRCz11 | 16 | 23505199 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCCCCGGATAATTTCAGAATTATTTTCCTTTATTGTGTGTGTCAGGTCTA[C/A]AACGTGTACATGGCAGGCAGGCAGTTATGCTCAAAGCGCTATCGGGAGTT
Long Flanking Sequence:
ACCTCACCCTAGTAGTAGTTAAGATTTAGGAGACATCTGATCTGAACCTAACTCTCTAAAAGCTCCCAGAAAGCCAGGATTTCTAGCATTAACCATTTGACATCACATTCATCGAAGGTGTTGGCTGAGAGCATAAGCTTAATTCTGTAACCAGATCCTTCTTTTTGTCCACAGAAACGGGGTGAATGTGGAAGGGGCCACTCATAAGCAGGTGGTGGATCTAATTCGAGCAGGAGAGAAGGAGTTGGTCCTGGCCGTCCTGTCAGTTCCGCAGCCAGAAACAGACAGTCTTGATCCTGGAGACGACGGCTCCTCACAGTCCTGCTATGACTACAGTGACAAGCAGGCCGTGCCCATCTCTGTGCCCACTTACAAACACGTGGAGCAGAGTGGGGAGAAGTTTGTTGTGAGTGCTGTGCCTTTTTTATGCCACAATTAAGTCTGATGTTATCCCCGGATAATTTCAGAATTATTTTCCTTTATTGTGTGTGTCAGGTCTA[C/A]AACGTGTACATGGCAGGCAGGCAGTTATGCTCAAAGCGCTATCGGGAGTTTGCCATCTTGCATCAGAATCTAAAGAGAGAATTTGCCAACTTTGCATTTCCCAAGCTGCCAGGGAAATGGCCTTTCTCCTTGTCTGAGCAACAGCTAGATGCTCGCAGGCGAGGCCTGGAGGAATACTTGGAGAAAGGTAGGAGAAGATGGCACAGGAAGGGGTTTTAAGATGAAAATCTGGAATATAATTGTTAACGAATGTTTCCAACATGTTCATTTCACTAGTATGCTCTGTTCGGGTAATCGGGGAGAGCGACATCATGCAGGAGTTTCTGTCGGAGTCTGATGAGGTAAGCCATTTTGTGTAGTAAAAGTAAACTGAACTGAAAACTACACTGAACTGTGATTACTGAAACAAAGTGGTTTTAATTGACCACAACTTCATTAATGTTAAGCTGCTTTAAAACAATCTACATAGTAAAAAGCTCTATAGAAATAAAGATGAGTTT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa10389
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000021092 | Essential Splice Site | 308 | 569 | 6 | 13 |
Genomic Location (Zv9):
Chromosome 16 (position 25752659)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 16 | 23598334 |
| GRCz11 | 16 | 23513366 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TCAGTTTCCAAATCCACACATTYTATTCTTCCTCACTGTTTCTTTTTTCA[G/A]GCCGTAGTAACAAAGATTGGGATGGACAGCATTACTGCAAGTTATTTTGC
Long Flanking Sequence:
CAACTACCTAATAAATAAAAATGTAAAAAAAAATTATCAGATCAAAAGCAGGTCATTGCAAATGTGAAATATGGAAATTACAAGAACACTGAGCCCTGAAATATGTGCTGAAGTTATATTTATTTGATGAAAGGCAGCATTTGTGGTCATATTGTTATTTGTGCACACATTTGCATGTTTGGTCTCGTGGTTGTGAGTGTGATTCTGTACCTTGTCGGCACACAGTGTACAAGTGGCCTACAGTGCTGCTCTGTCTGTCTGTTTGGACTGTATTTTTAGGTCTCTGCCTCTCTCAATTTTCCTAGAACTATAATGGCGTTTCTGATGTGGAGCTAAGGATAGCCATGCCAGACAAAACTACAGTTACAGTCCGAGTACGGAAGAATTGCACAACAGACCAGGTCTACCAGGTACCAGGTTTACAACATGTGACACTTTACAGCAAATGCTTCAGTTTCCAAATCCACACATTTTATTCTTCCTCACTGTTTCTTTTTTCA[G/A]GCCGTAGTAACAAAGATTGGGATGGACAGCATTACTGCAAGTTATTTTGCTCTGTTTGAAGTCATTAATCACACTTTTGGTAAGAGTTTATCTTTGTTTTGTCCTGTTTGGCAGTTTTAACAGAAATATTTGGACTATTTTGTAGTAGTATCTTTGTAGTCATTATTACTCACCCTGTTTTGTTTCAATGCTGAGAAGGATATCAGTATTTATAATATTCGTAAAACAATACTACACAAATTTGCATGCAGTTCGAATGCTGGAGTTGAGTATTCCAACATAACCAGCAACCTTCTTGCTATGAGGTGACAGCACTACCTACTGCACCACTGCGTCGCTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTAGAATTAAATTTTTCCCAAAAATAAATAAATAAATAAAATACTGAAGCACTTGACTAAATTATATTTGAAAATA
Associated Phenotype:
Not determined