Busch Lab

ZMP

ENSDARG00000088608

Ensembl ID:
ENSDARG00000088608
Human Orthologue:
L1TD1
Human Description:
LINE-1 type transposase domain containing 1 [Source:HGNC Symbol;Acc:25595]
Mouse Orthologue:
L1td1
Mouse Description:
LINE-1 type transposase domain containing 1 Gene [Source:MGI Symbol;Acc:MGI:3578435]

Alleles

There are 5 alleles of this gene:

Allele Name Consequence Status Availability
sa22802 Nonsense Available for shipment Available now
sa7297 Nonsense Mutation detected in F1 DNA Not yet available
sa42697 Nonsense Mutation detected in F1 DNA Not yet available
sa14021 Nonsense Available for shipment Available now
sa13772 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa22802
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000122529 Nonsense 3 286 1 2
Genomic Location (Zv9):
Chromosome 16 (position 20028205)
Other Location(s):
Assembly Chromosome Position
GRCz10 16 18058438
GRCz11 16 17965142
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AATCATTTATCTCTCAACAGACTTATCAACCCCGTGCGATCTTCACAGGT[C/T]AGTCAAATAATCATAATAACAAACTTTTCGACATGAAACCGAGTTCGAGC
Long Flanking Sequence:
GATTTATTTTTTGCACTACAGAATTTCATACAAATCCTGCTTCTTTTACAGTAAAATACTGTTTCCTTTCATTACAGCTAAACACTGGCTATTTTACAGTTATTTACTGCATAATCTACAGTAAGGGTTATTAGTGTAGTTGATTTGTTTATAAATAATTATTCATTTTTGGATATTAAATGTAACAATAAGGTCTTGAGATCACTACTGACAAAAGAATATTTTCCTCTTCCTGTTAAAAGAAAAGTTTTATCTGAGAGATTTTCTAAAGCGGACTATTGAAATTAGAAAAAGATACCTTTCATTTCCCTTGTTACCTAAAATGAAAGAAATACATTTCAAAACAATTAATGACATCTATCCATGTAACAAATTTCTTAGAATAAGATTTAGACTTCCGCTTCCGCCCGCATGGAGTGAGCCAGACAGACGGGAGCTCCTCAAATAAATAATCATTTATCTCTCAACAGACTTATCAACCCCGTGCGATCTTCACAGGT[C/T]AGTCAAATAATCATAATAACAAACTTTTCGACATGAAACCGAGTTCGAGCAAGAAAGTTACCTCGTCAATTCAACATAATACAAAAGCAGAAGGCAGTGATAACAAATTTGATGACAAAGACGGCGGCTCTCCCATCTCGCTAACAACACTCCGATCAGAGCTACAAACTCATCGGGAAGCGGTGATTAAGGACATTAAATCACAAATCGAAAACCTCCACCTGGAGATGCAAAAAAAACAGCATGCGCTACGAGAAGAAATTTTCCCGGAACTGGCAACCTTGAACAAAGCGCAATCCGATTCGGCGAAGGAGTGCACAGAGATTAGAAAAACTTTGAGTGACACCATGGATAGAGTGGCAGTACTTGAACAGTCTTACGAACGCATGAGTAAAGAACACAAAAAAATACAAGAGAAGTGTATGGATTTAGAGAATCGTAGCCGGAGACAAAATTTAAGATTCGTTGGAGTCCCTGAAGGGGTTGAAGTGGGAAATCCG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa7297
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000122529 Nonsense 166 286 2 2
Genomic Location (Zv9):
Chromosome 16 (position 20027701)
Other Location(s):
Assembly Chromosome Position
GRCz10 16 18057934
GRCz11 16 17964638
KASP Assay ID:
554-4489.1 (used for ordering genotyping assays)
KASP Sequence:
ATTTAAGATTCRTTGGAGTCCCTGAAGGGGTTGAAGYGGGAAATCCGGTT[C/T]GATTCATCAAAGACCTGCTACTGGAGCTGTTTGGAGCTGACGAACTTGGG
Long Flanking Sequence:
CAAATAATCATAATAACAAACTTTTCGACATGAAACCGAGTTCGAGCAAGAAAGTTACCTCGTCAATTCAACATAATACAAAAGCAGAAGGCAGTGATAACAAATTTGATGACAAAGACGGCGGCTCTCCCATCTCGCTAACAACACTCCGATCAGAGCTACAAACTCATCGGGAAGCGGTGATTAAGGACATTAAATCACAAATCGAAAACCTCCACCTGGAGATGCAAAAAAAACAGCATGCGCTACGAGAAGAAATTTTCCCGGAACTGGCAACCTTGAACAAAGCGCAATCCGATTCGGCGAAGGAGTGCACAGAGATTAGAAAAACTTTGAGTGACACCATGGATAGAGTGGCAGTACTTGAACAGTCTTACGAACGCATGAGTAAAGAACACAAAAAAATACAAGAGAAGTGTATGGATTTAGAGAATCGTAGCCGGAGACAAAATTTAAGATTCGTTGGAGTCCCTGAAGGGGTTGAAGTGGGAAATCCGGTT[C/T]GATTCATCAAAGACCTGCTACTGGAGCTGTTTGGAGCTGACGAACTTGGGGATTCTAATATGATGGTGGATCGAGCGCACAGGACCCTTGCTCCGAGACCTACAACGGGAGAGAGACCCCGGGCATTAATCGTCCACTTCCACTATTATGCGGACAAAGAGAAACTTCTTAAGTTATCCAGAAATAAAGGCCGTCTTTACTATAAGGGATCCCCAGTACACATCTTCCCTGACATGAGTCCAGAAGTTGGCAAACTTCGCGCTGCGTTCAATCCAGTCAAGGCCAAGCTGCGAGCCGCCGGAATAACCTACAGTCTATTTTACCCTGCCAGATTAACAATTACTGTGGACGGAATCAGGTACACTTTTGAGCACCCTCGAGAAGCTGATACATTTCTGGAAAAGAAGTCTCAAACCTAGATGGCTGAACTGTGAGGCTTGATCATCTGACTGAAAATAAATGTGGTGTCTGTTCTTATTTTTATCAGGCTTGGATACTTA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa42697
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000122529 Nonsense 215 286 2 2
Genomic Location (Zv9):
Chromosome 16 (position 20027552)
Other Location(s):
Assembly Chromosome Position
GRCz10 16 18057785
GRCz11 16 17964489
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCTACAACGGGAGAGAGACCCCGGGCATTAATCGTCCACTTCCACTATTA[T/A]GCGGACAAAGAGAAACTTCTTAAGTTATCCAGAAATAAAGGCCGTCTTTA
Long Flanking Sequence:
CGATCAGAGCTACAAACTCATCGGGAAGCGGTGATTAAGGACATTAAATCACAAATCGAAAACCTCCACCTGGAGATGCAAAAAAAACAGCATGCGCTACGAGAAGAAATTTTCCCGGAACTGGCAACCTTGAACAAAGCGCAATCCGATTCGGCGAAGGAGTGCACAGAGATTAGAAAAACTTTGAGTGACACCATGGATAGAGTGGCAGTACTTGAACAGTCTTACGAACGCATGAGTAAAGAACACAAAAAAATACAAGAGAAGTGTATGGATTTAGAGAATCGTAGCCGGAGACAAAATTTAAGATTCGTTGGAGTCCCTGAAGGGGTTGAAGTGGGAAATCCGGTTCGATTCATCAAAGACCTGCTACTGGAGCTGTTTGGAGCTGACGAACTTGGGGATTCTAATATGATGGTGGATCGAGCGCACAGGACCCTTGCTCCGAGACCTACAACGGGAGAGAGACCCCGGGCATTAATCGTCCACTTCCACTATTA[T/A]GCGGACAAAGAGAAACTTCTTAAGTTATCCAGAAATAAAGGCCGTCTTTACTATAAGGGATCCCCAGTACACATCTTCCCTGACATGAGTCCAGAAGTTGGCAAACTTCGCGCTGCGTTCAATCCAGTCAAGGCCAAGCTGCGAGCCGCCGGAATAACCTACAGTCTATTTTACCCTGCCAGATTAACAATTACTGTGGACGGAATCAGGTACACTTTTGAGCACCCTCGAGAAGCTGATACATTTCTGGAAAAGAAGTCTCAAACCTAGATGGCTGAACTGTGAGGCTTGATCATCTGACTGAAAATAAATGTGGTGTCTGTTCTTATTTTTATCAGGCTTGGATACTTAAGAAAAAATAGCATTAATATATTGCTGGACATATACATAACTTTATTAAAAAAAAAAAAAAAAAGAACCGCAATGATTATAGTAAAGTGAAAATAGTACATGTAAATTGGTCTAATGAGTAACTTATTTGTTTTTGTAAAGGAGCTAAG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa14021
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000122529 Nonsense 286 286 2 2
ENSDART00000122529 Nonsense 286 286 2 2
Genomic Location (Zv9):
Chromosome 16 (position 20027339)
Other Location(s):
Assembly Chromosome Position
GRCz10 16 18057572
GRCz11 16 17964276
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
WGTCTRTTTTACCCTGCCAGATTAACAATTACTGTGGACGGAATCAGGTA[C/A]ACTTTTGAGCACCCTCGAGAAGCTGATAMATTTCTGGAAAAGAAGTCTCA
Long Flanking Sequence:
CTTGAACAGTCTTACGAACGCATGAGTAAAGAACACAAAAAAATACAAGAGAAGTGTATGGATTTAGAGAATCGTAGCCGGAGACAAAATTTAAGATTCGTTGGAGTCCCTGAAGGGGTTGAAGTGGGAAATCCGGTTCGATTCATCAAAGACCTGCTACTGGAGCTGTTTGGAGCTGACGAACTTGGGGATTCTAATATGATGGTGGATCGAGCGCACAGGACCCTTGCTCCGAGACCTACAACGGGAGAGAGACCCCGGGCATTAATCGTCCACTTCCACTATTATGCGGACAAAGAGAAACTTCTTAAGTTATCCAGAAATAAAGGCCGTCTTTACTATAAGGGATCCCCAGTACACATCTTCCCTGACATGAGTCCAGAAGTTGGCAAACTTCGCGCTGCGTTCAATCCAGTCAAGGCCAAGCTGCGAGCCGCCGGAATAACCTACAGTCTATTTTACCCTGCCAGATTAACAATTACTGTGGACGGAATCAGGTA[C/A]ACTTTTGAGCACCCTCGAGAAGCTGATACATTTCTGGAAAAGAAGTCTCAAACCTAGATGGCTGAACTGTGAGGCTTGATCATCTGACTGAAAATAAATGTGGTGTCTGTTCTTATTTTTATCAGGCTTGGATACTTAAGAAAAAATAGCATTAATATATTGCTGGACATATACATAACTTTATTAAAAAAAAAAAAAAAAAGAACCGCAATGATTATAGTAAAGTGAAAATAGTACATGTAAATTGGTCTAATGAGTAACTTATTTGTTTTTGTAAAGGAGCTAAGTGGTTTACTACCCTTTGGTTGAAGTAATGGGTAACGTTAACAACAGAAGTCTTCTAAACTTACTCTGCTGTTTTTTGTGTGATGTTCATACACACAGTGGACTGAGAGTTATGTTCAACCCCCAACTCTTTTGTTTATTTTATATTATTTATTTATTTATTTTTATTTTATTTATTATTATTATTTATTTTTTCCCTGTACACTCTAAAAACT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa13772
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000122529 Nonsense 286 286 2 2
ENSDART00000122529 Nonsense 286 286 2 2
Genomic Location (Zv9):
Chromosome 16 (position 20027339)
Other Location(s):
Assembly Chromosome Position
GRCz10 16 18057572
GRCz11 16 17964276
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
WGTCTRTTTTACCCTGCCAGATTAACAATTACTGTGGACGGAATCAGGTA[C/A]ACTTTTGAGCACCCTCGAGAAGCTGATAMATTTCTGGAAAAGAAGTCTCA
Long Flanking Sequence:
CTTGAACAGTCTTACGAACGCATGAGTAAAGAACACAAAAAAATACAAGAGAAGTGTATGGATTTAGAGAATCGTAGCCGGAGACAAAATTTAAGATTCGTTGGAGTCCCTGAAGGGGTTGAAGTGGGAAATCCGGTTCGATTCATCAAAGACCTGCTACTGGAGCTGTTTGGAGCTGACGAACTTGGGGATTCTAATATGATGGTGGATCGAGCGCACAGGACCCTTGCTCCGAGACCTACAACGGGAGAGAGACCCCGGGCATTAATCGTCCACTTCCACTATTATGCGGACAAAGAGAAACTTCTTAAGTTATCCAGAAATAAAGGCCGTCTTTACTATAAGGGATCCCCAGTACACATCTTCCCTGACATGAGTCCAGAAGTTGGCAAACTTCGCGCTGCGTTCAATCCAGTCAAGGCCAAGCTGCGAGCCGCCGGAATAACCTACAGTCTATTTTACCCTGCCAGATTAACAATTACTGTGGACGGAATCAGGTA[C/A]ACTTTTGAGCACCCTCGAGAAGCTGATACATTTCTGGAAAAGAAGTCTCAAACCTAGATGGCTGAACTGTGAGGCTTGATCATCTGACTGAAAATAAATGTGGTGTCTGTTCTTATTTTTATCAGGCTTGGATACTTAAGAAAAAATAGCATTAATATATTGCTGGACATATACATAACTTTATTAAAAAAAAAAAAAAAAAGAACCGCAATGATTATAGTAAAGTGAAAATAGTACATGTAAATTGGTCTAATGAGTAACTTATTTGTTTTTGTAAAGGAGCTAAGTGGTTTACTACCCTTTGGTTGAAGTAATGGGTAACGTTAACAACAGAAGTCTTCTAAACTTACTCTGCTGTTTTTTGTGTGATGTTCATACACACAGTGGACTGAGAGTTATGTTCAACCCCCAACTCTTTTGTTTATTTTATATTATTTATTTATTTATTTTTATTTTATTTATTATTATTATTTATTTTTTCCCTGTACACTCTAAAAACT
Associated Phenotype:
Not determined