Busch Lab

ZMP

LOC569664

Ensembl ID:
ENSDARG00000060638
Human Orthologue:
CLSTN2
Human Description:
calsyntenin 2 [Source:HGNC Symbol;Acc:17448]
Mouse Orthologue:
Clstn2
Mouse Description:
calsyntenin 2 Gene [Source:MGI Symbol;Acc:MGI:1929897]

Alleles

There are 6 alleles of this gene:

Allele Name Consequence Status Availability
sa42616 Nonsense Mutation detected in F1 DNA Not yet available
sa10780 Nonsense Available for shipment Available now
sa35982 Nonsense Mutation detected in F1 DNA Not yet available
sa17939 Essential Splice Site Available for shipment Available now

Mutation Details

Allele Name:
sa42616
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000085676 Nonsense 226 919 5 19
Genomic Location (Zv9):
Chromosome 15 (position 40130592)
Other Location(s):
Assembly Chromosome Position
GRCz10 15 41647299
GRCz11 15 41604695
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CAGGAAGCGATCGTGCACATCCATGTGAAGCCCATCTGCAAACCTGGATG[G/A]CAGGGTAAGGTTTGGACAGGTTTTTGTCTTAGATGCATATTGCAGAATGA
Long Flanking Sequence:
CATTTGCAAACTAATTTAATTTTTTTTCCTTTTACATATGGATTTATTTGGTTGTTACCATCATCTGGAGAAAATTTTAAGTCAACAGCTTCTTTAGAAATGTTTTTTGAGAGTAATGGTGATGTGTTCAATTCTTATTTCTGTATATAATAACTTATATTTGATTGTAACTTTAACTTAATTTGATTGTAATGTAATAATGTGCAACTTAGTAAATCTGCTTTTAAACATTAATTATTGCAAAATACAAACTCAAATTGAATTTGTAATCAGTTAGAAGAAAGTCAGTTCTTGTGTATTATGAGTTATGAGTATAACATGCCATATACAAATGAAAAAGTTTTTTTGCGTGCAGGAAACATCAGGAACACTGAGAGTCTGAGCTTTGAGAAGAAATCGCACTATAAGATTCGTGTGACGGCACTGGATTGTGGTCAGAAGAGAGCGATGCAGGAAGCGATCGTGCACATCCATGTGAAGCCCATCTGCAAACCTGGATG[G/A]CAGGGTAAGGTTTGGACAGGTTTTTGTCTTAGATGCATATTGCAGAATGATGAAATATTGCTTTATGCAAATCTGGGAGACAAGATGCAGTGCTGCACCAGGGAATAGAATCATATTAACAATATACCAGATACAATGCATTATCTACGACTCATTTATTGTTTTGTTTTTGTTTTTTTTGTGCTGGATTTGCTGTAAAATTATTTGGTTTAAAAGTTTGAAATTATTATGCATTTTTATCTGCATTTTATTAGTATTAACTTTTTTTTTTTAATCTAATATGTTTAGTTATTACAATTTTAGCTTAGTTTAGTTTCAGTCATTTTACTCTGTGTATTTTTCTAAACTAAAATTTTAGTTTAGTTTCTACCTAAAACTTACTTGGTGCTATTTTAAAATGTATCTATATAGTTATATTATTAATAGTTAAAATGGTTTGCAGTTTGTTTGTTTTTTTGTTTTTTTTTTGCTTTTATTTCGATTTTGGGGTTTTTGAGCTT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa10780
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000085676 Nonsense 508 919 10 19
Genomic Location (Zv9):
Chromosome 15 (position 40166533)
Other Location(s):
Assembly Chromosome Position
GRCz10 15 41683240
GRCz11 15 41640636
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GAAAAATCGAAAGCCAGAAGATCATYTCCTGCCTACAGGCCTGCAAAGAA[G/T]GACTAGACATYACATCTCTRGAAAACCTCGGACAGAGAATCAAGGTTTCA
Long Flanking Sequence:
AAATGCAAGTAATCACTCATGATTAAGTTACATCATTGCAGCAATTTAAAGTGACCCTTTATGCCATTTCAAATTTCCTAATTTGTTTTGAAAGACACCTATGTCTTTAAATCCATTAAGGACAAAAACAATACAGTTTTCTCAGAATATTAATTACAGAATCAGCTCTTTCTTTAATGTCTCAAACTGTTGGTTCAAGGATCTGGTCCCTCTAAACCCCTGCCTTTCTAAGAGTCTACTCTGCTCTGATTGGTCAGATCTGGGCCTAATCTATTGTGATTTCATTGCTTTTTGTGCACAAGCATTGATTAACATTATAAGATCAGTAGGATTTGACAGCTCTGGCTCACAGCAGGTGTGTGTTTGTGTTGTGTACAGGTGGAGAGGTCTCTAAAGCAAAGTTTTCACAGTATTTTCGAGGCAGTTTGTCTGGACTGACGATACGACCGGGAAAAATCGAAAGCCAGAAGATCATCTCCTGCCTACAGGCCTGCAAAGAA[G/T]GACTAGACATCACATCTCTGGAAAACCTCGGACAGAGAATCAAGGTTTCACAAACACGCATACACAAAAACTTGTATATATGGTTTACGGGGACTCTTCATAGTCGTAATGTATTTTATACTATTAAACCTGCTTATTATATGGCCTTACCATAAGTATAGCCCTAAACCCAACCCTCACAGAAAACATGAGACCAATTTTGAATGTCAAAAAACCCTGTTAAGTATGCAAAACCAACTATTGCTATTGGAAGCTGTTTGGGCAGATTGTGTGGATGTGTTCTGGTTGTAAGTATAGTGTGTTCACAGTCATATTAGAGTCATATAAACACAACAAGCCTCTTTTTTTATTTCTTGACATTAAAATAGGGTCCAAATCCCAGAGATTTTGGGACCCACCGCAACATGACGTGAAATGGATGATACAAGAAATGCATCTCAAGCGATAATATCTTAAGCTTATCCCACTTTTTCTTGATCCAACTGCTGTGATTTTATTTT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa35982
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000085676 Nonsense 771 919 16 19
Genomic Location (Zv9):
Chromosome 15 (position 40183771)
Other Location(s):
Assembly Chromosome Position
GRCz10 15 41700478
GRCz11 15 41657874
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTCACAGTGAGGAGGCCAGAGAACATGTCAATCATTTGATGACCCCACCC[A/T]AATCTATGCAAATTACTCATCGTACAGTCATGGAGTCTAACAACTACTTC
Long Flanking Sequence:
TGGATTACTGTGACATCTTGGTATTGGGGGAGGAGTTAAGGGCGGGGCTAGAGAGTCTGGAACTGCATCACAGTGCCTTATTGGGAAAACACCTGGAATACGCCAACTCCAGCACCGGCATGTCCATATATGGTACGATCAAAAACTCAATTTCCTTCTCAAATTTTCCCCAATACAAACTCCTCAGCTCTGTCTTCATCGACATCTGTTGTAGGTGTGGACTCTATTTCTCACTACACTGAGGTGATCAGACAGGTGCGATATCAGAGCCGTCGTGCTGTCGATTCAGTCCGCACCTTCAGACTCACCTGTTCAGAACTCAACGGACGATACACTAGCGATCAGTACACATTACAGGTGAGAAACAAATGAAGAGATTATTGTTGTAGTCGCACTAATCAAGCCTCAGCTTTGATATGATCTCCCTCACTGTTCACAAGGTCAACATCCTTCACAGTGAGGAGGCCAGAGAACATGTCAATCATTTGATGACCCCACCC[A/T]AATCTATGCAAATTACTCATCGTACAGTCATGGAGTCTAACAACTACTTCAACTTAGGTGAGTCAAAGTCAGCCAGAATGTATGCGAATGAATGTTGTGTTGTAAAATAAGGCAGTTATTAAATAACATGATAGTAATTTTGTTTATTAATACTGATATTAATATTGGTGCGGCGCAAATGTTTGTTTTGCTATTTCCAGCCCAAGTACATGTCTCAAACATAATAATCCCACTTTATAATTAGGAGTAGTTCTATTAAGATGTCATAATTTTACTGTACATTAACAAACAAGACATTAAAAGTCTGTTCAAGTCCACCATAATGACTGTACAAAATTTAGCATTTTAAGCAGCAGTAGACCTACACATAGGCCTAATATTATTAGTTTTGTTTTACCATATCGTCACTTTAGAATGATAAGCTTCTATCTGACATTTTTGTCAAAATTGAGTTACTGACATATTCCTATTAAATGACAACTTATTTACATTCAATTCAG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa17939
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000085676 Essential Splice Site 872 919 18 19
Genomic Location (Zv9):
Chromosome 15 (position 40185568)
Other Location(s):
Assembly Chromosome Position
GRCz10 15 41702275
GRCz11 15 41659671
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GCAGGTACGACAAACCAGCCACAAAMCCAGCCAACACAAMACACAATCAW[G/A]TAAAGAAGCTGCCAAGATGTTGACACCTGTCAAACTGTCAGAGNNNNNNNNNNNNNNNNCACACAC
Long Flanking Sequence:
TCAGCTCAAATCAACATCAGTCACTCAGTAGCCTATTAATAACGTTAAAGACTTTTAATATGTAGAAATTAGATTAAAAGCCTTTGCCATTTTGTTGAGAGGCATGTCGTGTTTGGTGCCGACAGCCAAATTGCATGTTGTTCGGATACAGAGCCACTTTAAAATTCTAAAAGTAACAATAATAAAATCAAACTTGACAATATACACAGAAAGCTCATAACTTGGCATCTACTCTGTGCCTCCTAATTTGATGCATTTATTGTCATCTCTAGTTGTGCCTGCTGTTTCTACATCAGTGGTTGTGGTGTGCATCGCCGCCCTGCTGGTGGTTCTGCTGGGCGTTTACCAGCTCAACCAAACACAAAACAAAGACAGCATCCAAACACACACACTGGCAGAGGAACAAGTGGACTGTGAAGGCTCTTCTCTCTCCATCACTGTCAACCCACTGCAGGTACGACAAACCAGCCACAAAACCAGCCAACACAACACACAATCAT[G/A]TAAAGAAGCTGCCAAGATGTTGACACCTGTCAAACTGTCAGAGCACACACACACACACACACACACACACACACACACAAGTCTCTATGAAAACACAAACTTCTTTTTACAGCTGACAGGACAGAACTGCAGTCGCACAATGAGCTGGAGCTTGTTTAAACTCGGTTGTTTCTAGAAAACAAATGTACTAGAGTCACATTCATGGAAACAATTAAGACATCCTAGGACATATCTTATTTGGACAAATCTCAGTTTCTCTTTATTTAACTGGACTGTTTTATCTATGGATTTGAGCAAAATGTTAATATTTATTTTGTTTTATAAAGGTAAAGGTTTTTGGAGCATTTCTTCCCAATCTCAATTAAGAATTGTGTAATTGAGACAAATTTTCTGGTCAGAATAAATTAATGGTGCATCAGTTAATGCATTTACTAACATAAACGACTAGCAATACATATCTTACACTATGTATGAAGCATCTTTGTTAACATGAGTTAACA
Associated Phenotype:
Not determined