ZMP
LOC569664
Ensembl ID:
Human Orthologue:
CLSTN2
Human Description:
calsyntenin 2 [Source:HGNC Symbol;Acc:17448]
Mouse Orthologue:
Clstn2
Mouse Description:
calsyntenin 2 Gene [Source:MGI Symbol;Acc:MGI:1929897]
Alleles
There are 6 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa42616 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa10780 | Nonsense | Available for shipment | Available now |
sa35982 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa17939 | Essential Splice Site | Available for shipment | Available now |
Mutation Details
Allele Name:
sa42616
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000085676 | Nonsense | 226 | 919 | 5 | 19 |
Genomic Location (Zv9):
Chromosome 15 (position 40130592)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 15 | 41647299 |
GRCz11 | 15 | 41604695 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CAGGAAGCGATCGTGCACATCCATGTGAAGCCCATCTGCAAACCTGGATG[G/A]CAGGGTAAGGTTTGGACAGGTTTTTGTCTTAGATGCATATTGCAGAATGA
Long Flanking Sequence:
CATTTGCAAACTAATTTAATTTTTTTTCCTTTTACATATGGATTTATTTGGTTGTTACCATCATCTGGAGAAAATTTTAAGTCAACAGCTTCTTTAGAAATGTTTTTTGAGAGTAATGGTGATGTGTTCAATTCTTATTTCTGTATATAATAACTTATATTTGATTGTAACTTTAACTTAATTTGATTGTAATGTAATAATGTGCAACTTAGTAAATCTGCTTTTAAACATTAATTATTGCAAAATACAAACTCAAATTGAATTTGTAATCAGTTAGAAGAAAGTCAGTTCTTGTGTATTATGAGTTATGAGTATAACATGCCATATACAAATGAAAAAGTTTTTTTGCGTGCAGGAAACATCAGGAACACTGAGAGTCTGAGCTTTGAGAAGAAATCGCACTATAAGATTCGTGTGACGGCACTGGATTGTGGTCAGAAGAGAGCGATGCAGGAAGCGATCGTGCACATCCATGTGAAGCCCATCTGCAAACCTGGATG[G/A]CAGGGTAAGGTTTGGACAGGTTTTTGTCTTAGATGCATATTGCAGAATGATGAAATATTGCTTTATGCAAATCTGGGAGACAAGATGCAGTGCTGCACCAGGGAATAGAATCATATTAACAATATACCAGATACAATGCATTATCTACGACTCATTTATTGTTTTGTTTTTGTTTTTTTTGTGCTGGATTTGCTGTAAAATTATTTGGTTTAAAAGTTTGAAATTATTATGCATTTTTATCTGCATTTTATTAGTATTAACTTTTTTTTTTTAATCTAATATGTTTAGTTATTACAATTTTAGCTTAGTTTAGTTTCAGTCATTTTACTCTGTGTATTTTTCTAAACTAAAATTTTAGTTTAGTTTCTACCTAAAACTTACTTGGTGCTATTTTAAAATGTATCTATATAGTTATATTATTAATAGTTAAAATGGTTTGCAGTTTGTTTGTTTTTTTGTTTTTTTTTTGCTTTTATTTCGATTTTGGGGTTTTTGAGCTT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa10780
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000085676 | Nonsense | 508 | 919 | 10 | 19 |
Genomic Location (Zv9):
Chromosome 15 (position 40166533)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 15 | 41683240 |
GRCz11 | 15 | 41640636 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GAAAAATCGAAAGCCAGAAGATCATYTCCTGCCTACAGGCCTGCAAAGAA[G/T]GACTAGACATYACATCTCTRGAAAACCTCGGACAGAGAATCAAGGTTTCA
Long Flanking Sequence:
AAATGCAAGTAATCACTCATGATTAAGTTACATCATTGCAGCAATTTAAAGTGACCCTTTATGCCATTTCAAATTTCCTAATTTGTTTTGAAAGACACCTATGTCTTTAAATCCATTAAGGACAAAAACAATACAGTTTTCTCAGAATATTAATTACAGAATCAGCTCTTTCTTTAATGTCTCAAACTGTTGGTTCAAGGATCTGGTCCCTCTAAACCCCTGCCTTTCTAAGAGTCTACTCTGCTCTGATTGGTCAGATCTGGGCCTAATCTATTGTGATTTCATTGCTTTTTGTGCACAAGCATTGATTAACATTATAAGATCAGTAGGATTTGACAGCTCTGGCTCACAGCAGGTGTGTGTTTGTGTTGTGTACAGGTGGAGAGGTCTCTAAAGCAAAGTTTTCACAGTATTTTCGAGGCAGTTTGTCTGGACTGACGATACGACCGGGAAAAATCGAAAGCCAGAAGATCATCTCCTGCCTACAGGCCTGCAAAGAA[G/T]GACTAGACATCACATCTCTGGAAAACCTCGGACAGAGAATCAAGGTTTCACAAACACGCATACACAAAAACTTGTATATATGGTTTACGGGGACTCTTCATAGTCGTAATGTATTTTATACTATTAAACCTGCTTATTATATGGCCTTACCATAAGTATAGCCCTAAACCCAACCCTCACAGAAAACATGAGACCAATTTTGAATGTCAAAAAACCCTGTTAAGTATGCAAAACCAACTATTGCTATTGGAAGCTGTTTGGGCAGATTGTGTGGATGTGTTCTGGTTGTAAGTATAGTGTGTTCACAGTCATATTAGAGTCATATAAACACAACAAGCCTCTTTTTTTATTTCTTGACATTAAAATAGGGTCCAAATCCCAGAGATTTTGGGACCCACCGCAACATGACGTGAAATGGATGATACAAGAAATGCATCTCAAGCGATAATATCTTAAGCTTATCCCACTTTTTCTTGATCCAACTGCTGTGATTTTATTTT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa35982
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000085676 | Nonsense | 771 | 919 | 16 | 19 |
Genomic Location (Zv9):
Chromosome 15 (position 40183771)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 15 | 41700478 |
GRCz11 | 15 | 41657874 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTCACAGTGAGGAGGCCAGAGAACATGTCAATCATTTGATGACCCCACCC[A/T]AATCTATGCAAATTACTCATCGTACAGTCATGGAGTCTAACAACTACTTC
Long Flanking Sequence:
TGGATTACTGTGACATCTTGGTATTGGGGGAGGAGTTAAGGGCGGGGCTAGAGAGTCTGGAACTGCATCACAGTGCCTTATTGGGAAAACACCTGGAATACGCCAACTCCAGCACCGGCATGTCCATATATGGTACGATCAAAAACTCAATTTCCTTCTCAAATTTTCCCCAATACAAACTCCTCAGCTCTGTCTTCATCGACATCTGTTGTAGGTGTGGACTCTATTTCTCACTACACTGAGGTGATCAGACAGGTGCGATATCAGAGCCGTCGTGCTGTCGATTCAGTCCGCACCTTCAGACTCACCTGTTCAGAACTCAACGGACGATACACTAGCGATCAGTACACATTACAGGTGAGAAACAAATGAAGAGATTATTGTTGTAGTCGCACTAATCAAGCCTCAGCTTTGATATGATCTCCCTCACTGTTCACAAGGTCAACATCCTTCACAGTGAGGAGGCCAGAGAACATGTCAATCATTTGATGACCCCACCC[A/T]AATCTATGCAAATTACTCATCGTACAGTCATGGAGTCTAACAACTACTTCAACTTAGGTGAGTCAAAGTCAGCCAGAATGTATGCGAATGAATGTTGTGTTGTAAAATAAGGCAGTTATTAAATAACATGATAGTAATTTTGTTTATTAATACTGATATTAATATTGGTGCGGCGCAAATGTTTGTTTTGCTATTTCCAGCCCAAGTACATGTCTCAAACATAATAATCCCACTTTATAATTAGGAGTAGTTCTATTAAGATGTCATAATTTTACTGTACATTAACAAACAAGACATTAAAAGTCTGTTCAAGTCCACCATAATGACTGTACAAAATTTAGCATTTTAAGCAGCAGTAGACCTACACATAGGCCTAATATTATTAGTTTTGTTTTACCATATCGTCACTTTAGAATGATAAGCTTCTATCTGACATTTTTGTCAAAATTGAGTTACTGACATATTCCTATTAAATGACAACTTATTTACATTCAATTCAG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa17939
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000085676 | Essential Splice Site | 872 | 919 | 18 | 19 |
Genomic Location (Zv9):
Chromosome 15 (position 40185568)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 15 | 41702275 |
GRCz11 | 15 | 41659671 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GCAGGTACGACAAACCAGCCACAAAMCCAGCCAACACAAMACACAATCAW[G/A]TAAAGAAGCTGCCAAGATGTTGACACCTGTCAAACTGTCAGAGNNNNNNNNNNNNNNNNCACACAC
Long Flanking Sequence:
TCAGCTCAAATCAACATCAGTCACTCAGTAGCCTATTAATAACGTTAAAGACTTTTAATATGTAGAAATTAGATTAAAAGCCTTTGCCATTTTGTTGAGAGGCATGTCGTGTTTGGTGCCGACAGCCAAATTGCATGTTGTTCGGATACAGAGCCACTTTAAAATTCTAAAAGTAACAATAATAAAATCAAACTTGACAATATACACAGAAAGCTCATAACTTGGCATCTACTCTGTGCCTCCTAATTTGATGCATTTATTGTCATCTCTAGTTGTGCCTGCTGTTTCTACATCAGTGGTTGTGGTGTGCATCGCCGCCCTGCTGGTGGTTCTGCTGGGCGTTTACCAGCTCAACCAAACACAAAACAAAGACAGCATCCAAACACACACACTGGCAGAGGAACAAGTGGACTGTGAAGGCTCTTCTCTCTCCATCACTGTCAACCCACTGCAGGTACGACAAACCAGCCACAAAACCAGCCAACACAACACACAATCAT[G/A]TAAAGAAGCTGCCAAGATGTTGACACCTGTCAAACTGTCAGAGCACACACACACACACACACACACACACACACACACAAGTCTCTATGAAAACACAAACTTCTTTTTACAGCTGACAGGACAGAACTGCAGTCGCACAATGAGCTGGAGCTTGTTTAAACTCGGTTGTTTCTAGAAAACAAATGTACTAGAGTCACATTCATGGAAACAATTAAGACATCCTAGGACATATCTTATTTGGACAAATCTCAGTTTCTCTTTATTTAACTGGACTGTTTTATCTATGGATTTGAGCAAAATGTTAATATTTATTTTGTTTTATAAAGGTAAAGGTTTTTGGAGCATTTCTTCCCAATCTCAATTAAGAATTGTGTAATTGAGACAAATTTTCTGGTCAGAATAAATTAATGGTGCATCAGTTAATGCATTTACTAACATAAACGACTAGCAATACATATCTTACACTATGTATGAAGCATCTTTGTTAACATGAGTTAACA
Associated Phenotype:
Not determined