ZMP
usp16
Ensembl ID:
ZFIN ID:
Description:
Ubiquitin carboxyl-terminal hydrolase 16 [Source:UniProtKB/Swiss-Prot;Acc:A8HAL1]
Human Orthologue:
USP16
Human Description:
ubiquitin specific peptidase 16 [Source:HGNC Symbol;Acc:12614]
Mouse Orthologue:
Usp16
Mouse Description:
ubiquitin specific peptidase 16 Gene [Source:MGI Symbol;Acc:MGI:1921362]
Alleles
There are 5 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa17060 | Nonsense | Available for shipment | Available now |
sa16288 | Nonsense | Available for shipment | Available now |
sa2796 | Nonsense | F2 line generated | Not yet available |
sa42615 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa17060
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000085645 | Nonsense | 48 | 815 | 3 | 17 |
ENSDART00000134075 | Nonsense | 48 | 113 | 3 | 4 |
The following transcripts of ENSDARG00000060633 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 15 (position 39833620)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 15 | 41350327 |
GRCz11 | 15 | 41307723 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GAGMACAGCGTACTGAAGAAAGCCTGWCTGAATRAGCACTGGAGCTCCTG[T/A]CAAGACTGTGAGCAGGACAAGMCTGAAGAAAAGCAGATCTTAGAGGATCA
Long Flanking Sequence:
AGATTATGGTAGAGACCTTTTTCTTTTTTCCTATAATTACAGACATGTGCAGGAACCACCAAAGTTAATTACAGCAGGCTAGACCACACAGAACATCAAAGGTACACTTTCAAATTTGAGTTTATAAAAAAAAAAAAAAAAAAGCGCCTCTTTTTTTTTTAGGTGTTTATTATAACACAGACGACATATACAGTTATTTTAAACACTTTCAATAGTGTTTTATGAAAATTCATAGGGTTTTCTGTATCATATGTGTCAAAAGAAGATTATTCAGCAAAAATCATTCCATTTGCTGAAGCACAGAGAAAGTTGTGGCAACATTAAGATTCAAATCCCCATAGAGGGGATGAAAACATCCCCGACAGCACACAAGGGTTAACATCAAACCCCACTAATGATTCTCCTGCTGCTTTATCAGGGCCCTCCTGCACTCACATTCGTAAAGGAACAGAGAACAGCGTACTGAAGAAAGCCTGTCTGAATGAGCACTGGAGCTCCTG[T/A]CAAGACTGTGAGCAGGACAAGCCTGAAGAAAAGCAGATCTTAGAGGATCAGACTGACGGAGAGAGTCCAGCTGTGTGGATGTGTCTGAAATGTGGACACAGAGTAAGTGATCATTAGCTCACTATTGACCAGTGTTTTTGTGCAGTTAGTCACAAAATAACTTGTTACTGTAATGAAGGTTCTTATCCACTGAAAAATTAAAGTATGGGATTTCTTTTCATGTTTAGGGAATTACAGTTGGGGGGGGATTCAGTTCAATTGGGACGCTTTGATTAATGGCAAAATGTGTCCTGAATTTCCTCCACTGTTCAGAGAATTTCTGTATAGACAATTTCAATGTAGTAATGTTATTGGCCCTTGAACATTTCCTGCTTGTTCTTATAACATATTATAACTGTAACAAGAGGCAATTATACTTTCATGTTAAAACATCTATCATGCGTTGGGAGACTCGATTATTTATCAATATGTGGACTTTTTTGGATTCTCGAAAGCTATAG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa16288
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000085645 | Nonsense | 195 | 815 | 6 | 17 |
ENSDART00000134075 | None | None | 113 | None | 4 |
The following transcripts of ENSDARG00000060633 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 15 (position 39829669)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 15 | 41346376 |
GRCz11 | 15 | 41303772 |
KASP Assay ID:
2260-8936.1 (used for ordering genotyping assays)
KASP Sequence:
AGGGGAAGCAGAAGAGCAGYTYGAAACAAGAGGACAGTYCTAAMAGCCAK[C/T]AATCAGCCGCCGCTGGAAGCTCAGYTGTGGTGTCTGTCAGGGGTCTCAGT
Long Flanking Sequence:
ACGTGTTCAATACTTATTTTACCGACTGTATCTATAAAAACTGTCAACGGCCGTATTATTGTAGTTAAATATTATTTAAATTATGCTAAAATTACCTAAAAACCTGGACTATATAGATCTGAATAAAACTGTAAAGTTTGATCTTAGTGCTGCTTGAGGGATTTCTGTCTTATTTTGAATAAAGATATGTATCATAAATGAAGTCTAGAGATGCAAAATAGATGAAGAAGGATAATAAAAAATAAATAAATGTGGATTTTGGATGTTTTCTTCCTAGTAGTCTGAAGTAGGCATGCTTTTGGAAGTAAAATGGATCTAAGTGAATGAATTCTAACAATGGTTTTGCCTCAAACATGATTTATTTTCATTATAATTCTACAGAAAGTTGGAAAGAAGACATCTCTGTGATGAATTCTGCAGAGCAAACGCAGGATGAAGAGAAAGGGAAGAAGGGGAAGCAGAAGAGCAGCTCGAAACAAGAGGACAGTCCTAAAAGCCAT[C/T]AATCAGCCGCCGCTGGAAGCTCAGCTGTGGTGTCTGTCAGGGGTCTCAGTAATCTGGGAAACACGTGTTTCTTCAATGCAGTCGTGCAGGTACAGAGTCAGAGTGGGAGACGCTACACATGACAAACACAAACTCTTTTACTGTGAGTAAACAAGCTCTTTTCTTTTGTCTCCCTCTCAGAGTTTATCACAGACACAGTATTTGAGGGAGCTGCTGAAGCAGATTGCAGAGGAGAAGAGCAGCTTCTCCATCACTCCAGCACTGTCATCTGAGCTGGTACTGAAGCTCACACTCATCATGTTCCTCATTTTACACATAAAGCTTCATCTGACTGGACGTTTTCACATCATGTTTTCAGGATCCTCTTCAGATCCAGCTGGAAAGGCCTGGATCGCTCACTCTGGCTATGTGTCAGCTAATGAATGAAATCCAAGAGACCAAGAAAGGTGTTGTGACTCCTAAAGAGCTCTTCACACAAGTGTGTAAAAAGTAAGTAGTTG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa2796
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000085645 | Nonsense | 452 | 815 | 12 | 17 |
ENSDART00000134075 | None | None | 113 | None | 4 |
The following transcripts of ENSDARG00000060633 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 15 (position 39825776)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 15 | 41342483 |
GRCz11 | 15 | 41299879 |
KASP Assay ID:
554-2747.1 (used for ordering genotyping assays)
KASP Sequence:
ATGGGAATGAAGACATGCCTACAGGAACAGGAAGCAAATATCAGCAGAAG[A/T]AAGCCAAAAAACAGGCCAAGAAACAAGCCAAGGTAAAACACACACACACA
Long Flanking Sequence:
TCAGAGACTTATTTTATGACCAATTATAAACATATTGAACAACATATTAACATAGTACTTGGCTATAAACATACACCAACATAAACATAAAGAAAGAGGAATTAAATTAAGAATTAAATTCAGAGAAGAAAAAAATAAAAAAATTAAGTTATTATTGATAGATAATTGGGGTAAACTTTCAATTAGGATATAGTAGCCACTGAGCATTTAATGTAAGATAGAAAAGTCTGCCAGACCTCATAAAACGTGAGCTTCATATGTGTGCTGTAACCCTCAGACACTTTGAGGAAATGTTCATAGTTGCTGGTATGTGTGCATGTGTGTGTTCTTTAGCAGTGAACTGATCTGAGTGCCTCTTTTAGGCCTACAGGAAGAAGAATCAGAAGAAAGCAGTCCAGCATCGACACAGTGTCAGTGATGATGGAGACCAAGACACAAGTTCTCTAGCCAATGGGAATGAAGACATGCCTACAGGAACAGGAAGCAAATATCAGCAGAAG[A/T]AAGCCAAAAAACAGGCCAAGAAACAAGCCAAGGTAAAACACACACACACACACACACACACACACACACATATATACGTATATATATGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATGTTTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTATGTATGTATATGTATATGTGTATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATGTATGTATGTATATGTGTGTGTATGTATATATATATATATATATATATATATATATATATATATGTGTGTATATATATATATATATATATATATGTATATGTGTGTATTATTTATTTACATATGTATGTGTGTTCACAGAATCAGAGACGGCA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa42615
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000085645 | Essential Splice Site | 726 | 815 | 16 | 17 |
ENSDART00000134075 | None | None | 113 | None | 4 |
The following transcripts of ENSDARG00000060633 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 15 (position 39820576)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 15 | 41337283 |
GRCz11 | 15 | 41294679 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACCATGAAATTGTGTATTGTGTACTTCTTTAAAGCTCTCTTTGTGTTTCA[G/T]GGTGTAAAAGAGGGCGAGACGCAGGTGCTGTACAGTCTCTATGGCATAGT
Long Flanking Sequence:
ACTATTTATTCAATACACTTTAAATGATTGCAAAAATAGCTAATAATCAATATAGCATTTCTTTAGGGAAATGTCATATTGCAAGGAATATTGCTATCACAATATACTAATCAACCATATTGCATATTAATTAACGTTATGCCTTCTTTTATGAATACGTTTTTGCAAATATTTTATTTATTTTTAATAAATAAAAGGGGGCAGGGTGGGGTACTATGTGTTTTAAAGATATGTAAGTGTATGTGTGCTGAGTGGTATGAAGTCATTTTGTGCATTTCATTAAGGAACACTCACCAACACAATCATCCCAATCAACATAACATAATGAATTCTTTCTAAATAGAGTCATCTTGTGAAATTAGATTCATATATTGCTACATATATTGCAAATAAGAAAAAATTGCAGTGTCAGTTTTTTTCCAATATGATGCACCTTCATAGACAAAGGAAACCATGAAATTGTGTATTGTGTACTTCTTTAAAGCTCTCTTTGTGTTTCA[G/T]GGTGTAAAAGAGGGCGAGACGCAGGTGCTGTACAGTCTCTATGGCATAGTGGAACACAGTGGCACCATGCGCTCTGGACACTACACTGCCTATGTTAAATCACGACCCTCCACACACAATTGTGTACAAAACGGGACTGCTGCTGCATGTGAGTATCAGTGCTAAAACAAAGATTTTGATGACCTTTATGAATTTACATAAGCATGTGTTATAGTCTTATTGAAGTGCCTTGAAATGCACAAGATGTTCCGTGTGTTAATTTAATTTCCTCTGAAACAGGAAGTCAGAGCAGGCATATTGAGTGGTCACTTAGAAAAATCGCAATTAGTAAAACTGTGATGATGTGTTTAACTGTCATCAGGATCCTAAAGCCAAAGATTTTTAATATTTAGTTTAAATATTTTAAAAAGATTTTCAAGAATACACATTTACAAAACCCCACAGCCCTGCCAAAAATAGAACATACAATAGTTTACTAGCTGTCAATTACTTCGGTCTGA
Associated Phenotype:
Not determined