ZMP
col4a4
Ensembl ID:
ZFIN ID:
Description:
Type IV collagen alpha 4 chain [Source:UniProtKB/TrEMBL;Acc:Q4TZW9]
Human Orthologue:
COL4A4
Human Description:
collagen, type IV, alpha 4 [Source:HGNC Symbol;Acc:2206]
Mouse Orthologue:
Col4a4
Mouse Description:
collagen, type IV, alpha 4 Gene [Source:MGI Symbol;Acc:MGI:104687]
Alleles
There are 10 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa32056 | Nonsense | Available for shipment | Available now |
| sa22697 | Essential Splice Site | Available for shipment | Available now |
| sa22696 | Nonsense | Available for shipment | Available now |
| sa18383 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa32056
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000061186 | Nonsense | 881 | 1670 | 30 | 47 |
Genomic Location (Zv9):
Chromosome 15 (position 35244385)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 15 | 36118576 |
| GRCz11 | 15 | 35976545 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GGCCTTCAGGGACCCGCAGGAGTCAACGGTGACGGTGGAAATCCTGGATA[T/A]CCTGGACCAAAGGGTAAAGAGTCTTTCGAAGAGAGCTTAATGTGTTTTAG
Long Flanking Sequence:
ATATTTTGGGTGTTTTGGCGTTTTTGGACAGCTTTTGGGCTGGAAAAGTCAGCTATATCTGGCAACAATGCTAATAATATCGTCAATATTGTTTTGTTTTTTTTTTCTACAGGTATGTCTGGTGTTCCAGGGTATCCTGGTAGAAAAGGGGAAAGGGGGAAGGATGGTGCACCAGGACCACCTGGACGCCCAGGTAAGAGTCCAGAGCAGTGCGATAAAGGAGATGAGGGTCTGCCTGGCAAGAAAGGAGAACAAGGCTTAATTGGACATAGAGGTAAGTAGAGTTCACTGCATTAGCATACATTTGTTAAGACTGTTGGCTAACAATGTGACTTTTCTATGTTAGGCTACCCTGGAGAGAAGGGGTCACTTGGGGAGCTGGGATGTCCTGGCATTGGAGCCAAAGGAGCCCGGGGTAAACCTGGTACTCCTGGACCCCAAGGATGCATAGGCCTTCAGGGACCCGCAGGAGTCAACGGTGACGGTGGAAATCCTGGATA[T/A]CCTGGACCAAAGGGTAAAGAGTCTTTCGAAGAGAGCTTAATGTGTTTTAGGAAGTTAATTTTAATGTTAAATGTAACTCAATTACAACAAATGCCTTTAACTGCCATCTGTAACAATACATTTGGCTTGGATTTGTATGGAAGTTAGATAGATGTGGTCATCAAGGCTTATTTTAAATACACAATAGATTTACACCGCTAAGAGATTTTGTCTTGTTTCTAGTCCAAATATCTAAACAATCTTAAATCAACAAGCATATTCTAGACATGTAAAAATGTTGCTTTATTTTTAGAAATAATGAGTCAAAATTAAGTGAGATTTTTCCTAAAACAAGCACAATAATCAATTTGTGGGGCAAGTAAAATAATATTGTTTTCAGTTTGAACTTTGAAATAAGATTATTTTAATTTCATATTTTTAATGTTGACATATTATTCTGAAACCAAAACATACATTTTTTTTACTTAAATGCTTCATGGTTTAAAATGTTGAAAAACTGA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa22697
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000061186 | Essential Splice Site | 886 | 1670 | 30 | 47 |
Genomic Location (Zv9):
Chromosome 15 (position 35244370)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 15 | 36118561 |
| GRCz11 | 15 | 35976530 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCAGGAGTCAACGGTGACGGTGGAAATCCTGGATATCCTGGACCAAAGGG[T/C]AAAGAGTCTTTCGAAGAGAGCTTAATGTGTTTTAGGAAGTTAATTTTAAT
Long Flanking Sequence:
TGGCGTTTTTGGACAGCTTTTGGGCTGGAAAAGTCAGCTATATCTGGCAACAATGCTAATAATATCGTCAATATTGTTTTGTTTTTTTTTTCTACAGGTATGTCTGGTGTTCCAGGGTATCCTGGTAGAAAAGGGGAAAGGGGGAAGGATGGTGCACCAGGACCACCTGGACGCCCAGGTAAGAGTCCAGAGCAGTGCGATAAAGGAGATGAGGGTCTGCCTGGCAAGAAAGGAGAACAAGGCTTAATTGGACATAGAGGTAAGTAGAGTTCACTGCATTAGCATACATTTGTTAAGACTGTTGGCTAACAATGTGACTTTTCTATGTTAGGCTACCCTGGAGAGAAGGGGTCACTTGGGGAGCTGGGATGTCCTGGCATTGGAGCCAAAGGAGCCCGGGGTAAACCTGGTACTCCTGGACCCCAAGGATGCATAGGCCTTCAGGGACCCGCAGGAGTCAACGGTGACGGTGGAAATCCTGGATATCCTGGACCAAAGGG[T/C]AAAGAGTCTTTCGAAGAGAGCTTAATGTGTTTTAGGAAGTTAATTTTAATGTTAAATGTAACTCAATTACAACAAATGCCTTTAACTGCCATCTGTAACAATACATTTGGCTTGGATTTGTATGGAAGTTAGATAGATGTGGTCATCAAGGCTTATTTTAAATACACAATAGATTTACACCGCTAAGAGATTTTGTCTTGTTTCTAGTCCAAATATCTAAACAATCTTAAATCAACAAGCATATTCTAGACATGTAAAAATGTTGCTTTATTTTTAGAAATAATGAGTCAAAATTAAGTGAGATTTTTCCTAAAACAAGCACAATAATCAATTTGTGGGGCAAGTAAAATAATATTGTTTTCAGTTTGAACTTTGAAATAAGATTATTTTAATTTCATATTTTTAATGTTGACATATTATTCTGAAACCAAAACATACATTTTTTTTACTTAAATGCTTCATGGTTTAAAATGTTGAAAAACTGAAATAAAAATAAAAAG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa22696
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000061186 | Nonsense | 1577 | 1670 | 46 | 47 |
Genomic Location (Zv9):
Chromosome 15 (position 35226407)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 15 | 36100598 |
| GRCz11 | 15 | 35958567 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AAGACCGTCTTGACCCAGTGTGTCCACCCAAATGGAGGAGCCTCTGGACC[G/T]GATTTTCATTCATGATGGTAAGGAAAAAGCTCAGCTCCGTTTAAAATCAA
Long Flanking Sequence:
TTGGATATGTGGGGGAAACTGGAGCACCCGGAGGAAATCCATGTGAACATGGGGAGAACATGTAAACTGAACGCAGAATTGCCAACTGATCCAGCTGGGGCTCTAACCAGCGACTGTCTTGCTGTGAGGCGATTGTGCTACCCACTGCGCCACCATTCTGCCTGCAGGGCATGTTATAAACTAAAACACAAGACATTTTCAAACTGTTTTCTGTGTGCGTGTGTGTTTTACCAGGCCAGGCAGGTTCGTGTTTGCCAGTGTTCAGCACGATGCCGTTCTCCTGTTGTAATATGGACACTTGTGATTACGCCAGCCGCAATGACAAATCCTATTGGCTGTCTACAAATGCCCCCATTCCTAATAAGCCTCTGAAAGGGCAGGATATCGAGGAACACATCAGCAGGTGTGTGGTGTGTGAAGCTCCAACACCAACCATTGCAATACACAGTCAAGACCGTCTTGACCCAGTGTGTCCACCCAAATGGAGGAGCCTCTGGACC[G/T]GATTTTCATTCATGATGGTAAGGAAAAAGCTCAGCTCCGTTTAAAATCAATCAATCAACATCTGTCTGTCTGTCTATCTATTGTAAGGTAAGACTATCTGTCCGTCCGTCCATCCGTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTAGCTATCTATCTATCTATCTATCTATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCTATCCCTACAGTATCTATCTATCCATCCATCCATTCATCCATCCATCCATCCATCCCTACAGTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCCCTACAGTATCTATCTATCCAT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa18383
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000061186 | Nonsense | 1583 | 1670 | 47 | 47 |
Genomic Location (Zv9):
Chromosome 15 (position 35224946)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 15 | 36099137 |
| GRCz11 | 15 | 35957106 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GTGAATTTTGATATTAAGCANACTTTAAATMACCTGTCTGTGTTCCAGTA[T/A]ACGGGGTCAGGGGATGAAGGCGGTGGACAGTCTCTGACATCAACAGGAAG
Long Flanking Sequence:
TCCATCCATCCCTACAGTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCCATCCAGCTAGAGTCAATATCATTACTAATACAAAAGATATCAATATTGATTAATATCAATTAATCAATATTTAGTTTCAGTTTGGCAATTTGATTCTTATCGATATGATTTTGATTCTATTCAATATCAATTAGTTATTAGTATTGTAATTAAGTCAACTGAAGGACCACCACTCCAAATGTGGAAGCAAATGGTCAGACTTTAATTGATAATTACCAAAACAAACACATTTTTTCAGTGGATTAACTTGCACAGATTCATTATTCACCCTAAGAATAACAATGTGAGCTAGCCGAATAAGCAATTCAGTGAATTTTGATATTAAGCAGACTTTAAATCACCTGTCTGTGTTCCAGTA[T/A]ACGGGGTCAGGGGATGAAGGCGGTGGACAGTCTCTGACATCAACAGGAAGCTGTTTGCAAGACTTCCGCAGTCAGCCATTTGTGGAGTGCCAAGGTCCCCGTGGCACATGCAGTTATTTCGCCAGCATCTACAGTTTCTGGATGACTATAGACATGGAGCACAATGACTCCAGTCCTCACGGTCCTGTGATCACAGAGGAAAGGCAGCAGCGCGACAGCACCAGCAGATGCAGCATCTGCATGATGAATGACCCCAACCAATGATACAAGCCAATGGTATTTTCTAAACTGCACTGAGAATGCACATCAACACATCACTTGTTGTTTGAGTGATTGAGATGCTTTTTGGTCACTTTGTTTTTGGAGAGGACAAGAATGAACATTATTTGTGACCATTGAACTACACAGCTGTGAACTTTTTACTTCATGGGATTTGTTCCAACATAACCTCTTTACACAGCACGCATCTTTGCTTCTTGTCTTTGATTTCATTTTGGTGC
Associated Phenotype:
Not determined