Busch Lab

ZMP

scarf1

Ensembl ID:
ENSDARG00000077285
ZFIN ID:
ZDB-GENE-030131-8778
Human Orthologue:
SCARF1
Human Description:
scavenger receptor class F, member 1 [Source:HGNC Symbol;Acc:16820]
Mouse Orthologue:
Scarf1
Mouse Description:
scavenger receptor class F, member 1 Gene [Source:MGI Symbol;Acc:MGI:2449455]

Alleles

There are 5 alleles of this gene:

Allele Name Consequence Status Availability
sa10051 Nonsense Available for shipment Available now
sa13509 Nonsense Available for shipment Available now
sa14395 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa10051
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
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Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000110969 None None 425 None 3
ENSDART00000138401 Nonsense 408 870 7 10
Genomic Location (Zv9):
Chromosome 15 (position 27566079)
Other Location(s):
Assembly Chromosome Position
GRCz10 15 28284319
GRCz11 15 28217195
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TTTGTGTGTTTTTCTWCTAGGTAGCAGAGCTGGTCTTTTAGCAGGGCTTT[T/A]GATTCCTCTCTGCATATTAATACTCGCCTTGTTGKTCTGCTGCTGCTGTT
Long Flanking Sequence:
TTTATTTTAAACAATGTGTGATTTTAGATCTTTCAGTTGACTAATGATTTTGGTCTTCTTCCTCTCTGCAGATGTGACAAACCCTGCACAGATGGTAGATACGGAGATGGCTGTCGCTTCCTCTGTAAAACTTGCAATCATGGCCACTGCGACCATGTGACAGGAAGATGCATTTGTCTTCCTGGCTTTCAGGGTGAGAGGTGAGGGTACAATGGTATTTATAGGATGTTTTCAACTTGGTGTAAGATTCAAATGAGCGTCTCTCACTTGTCAATCTCTGTTGTAGCTGTAACAGCACATGTCCTTTTAATCTTTATGGCTTCAACTGCTCCTCCACATGTGATTGTGGAAGTCAAGCCTGCCATCCAGCCACTGGGGCTTGTCCAAACAGTATGTACAGACACAATATTTGATTTTCACAGCTGGTATCCACATCGCCTTCATCTGTTCTTTGTGTGTTTTTCTACTAGGTAGCAGAGCTGGTCTTTTAGCAGGGCTTT[T/A]GATTCCTCTCTGCATATTAATACTCGCCTTGTTGTTCTGCTGCTGCTGTTGTGGGAGGCCAGTCGAAGGAAAGGAAAGGTATGAATATGTTATATGTAATCTTACATCATGCAACAATCAGTATATTTACATCTACAGTACAGCAATATTCTGTTATGAACACAATTAAGACAATACTCTGATCAAGAATTCGTCATTTAAACAGATTTTTGATTAGCTTAATCCAGCTATTCAAGTCATACTCAAAGTAAACACGTTTTTATCTTACTAGCGCACATTGATATTCTTTAAGTGAACAATCTGTGCAAATTTATTTACTACAAATATTTTTAATCAAAGTCAGAATTTGCTTCTACATTTGGATTGGCGGTCCTTCTTTGCGGACATCAGTTTGAGGGTTTCAACCACAATGTTCTTAACCGCGCCCCTCTGACTGTTAGTTGCTTTGAGTCAAATATTTGTGCCAAAAGAATGCCCCACCCCCCATCTCAATATTTCAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa13509
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000110969 Nonsense 64 425 2 3
ENSDART00000138401 Nonsense 509 870 9 10
Genomic Location (Zv9):
Chromosome 15 (position 27562856)
Other Location(s):
Assembly Chromosome Position
GRCz10 15 28281096
GRCz11 15 28213972
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AGCCATCATCCGGCTGGGTAATAGATTCATTCGAAACTGATGAGGATGGA[G/T]AAGCTGTTTACTGCGAACCACCCAGGGAAGGTAAAGCAGTTTATCTCAGT
Long Flanking Sequence:
GGCCTAAATGTACTAAAATGGAAAAATGAAATTAATCTTCTAAAAGCAACTCATGGAAACACCTTAATTATAATATTGTCTTATTCTGAATAAGGTTACTAATTACATCATTCATGTCCATTTAAATGTACCCACTATGATTCCAATTCTGTCCTTCAGGGTCACAGTTGGAGATGGCAGTCCTGCAGTCCGCATGAAGCACCATGTTTATACTGTGTTGGCCAACATGGGTTCAGCAATGCCTTGCATCACTCTTTGGTCATCTGGTTTGCCCAGGGTTACTGGTATGTTAACATGTTTCTACTAAAATGTAGTTGTCGCTGAGGAATACAGTATATGTAAGTGGGATTATGTTTTGGTGATCATAAAGTGGACTTTAAATGTTCTCTGGTGTGTTTTCAGTCTCGCATCATGATCCTGAGCTCACATTTAACCACAGCTTCATCGAGCAGCCATCATCCGGCTGGGTAATAGATTCATTCGAAACTGATGAGGATGGA[G/T]AAGCTGTTTACTGCGAACCACCCAGGGAAGGTAAAGCAGTTTATCTCAGTATTTTTAATTTCACTGTCACTGTATCTATTATTTTATGGCTGCAGCAAGAGTTTTGCATTGGGTGTCCTTTTTAGCTATAATCATGAGCTATAATGGCTGTATTTAAATGGAACACTCCACTTTTTGCGGGAAATAGCGCAGAGTCGAGTATATGAAAAGAGCAACTTTTCATTTTCTGGTGGTTTTAGTACACAATGTAACAAGCTTTAAATAGGAAAATAATCGAAACTTTTCTTGGATTTTTTTGAGTAAGATGCTACTGTCTAATCCAGTTCCACAATTCATTCTAAGCTAAGATAAAAGTACTCCTACCAGACCCAGCAGAGATCGACTGGAAATATTTTAAAATGGTAAAACGCAACTGTTTAACTCTAGGGCACTTGTAAAGAAAATTTTTATGATAATTTTTTTTTTTTTACATAGGCATTACTTTGTATTTATTGAAAAAG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa14395
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000110969 Nonsense 282 425 3 3
ENSDART00000138401 Nonsense 727 870 10 10
Genomic Location (Zv9):
Chromosome 15 (position 27560173)
Other Location(s):
Assembly Chromosome Position
GRCz10 15 28278413
GRCz11 15 28211289
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AAGGGCCTGTTCAGGCGATGCTGCGCAGACTAGGAAGCCTCCAGAGGCAA[A/T]AAGAAGAAGTTGCTAAAGGSAAGGCCCAATCGATTGTTAAGCCTCCACGR
Long Flanking Sequence:
GCATCGCCAAATCCAAACGCCCTTCAGTGTCATTCGCAGAGGGTACAAAGTTCAGCCCAAAAGAGCGTCGCAGTTCAACTCAAGATCTGCAAGGGACCGCTCGAAAACCCAAACCCTGGGGTGTCCTGATGATCTCCGCCCTGCAAGGAGGACAGGGAAACCAGAATAACGAAACGGAAACAGAGAAAGAAGAAAAAAACGATGAGGAGAACATCTCTGAGGAGCAAAGAGCTTCCTCTGAAACACTACAAAATGATTCGGAAAGATATAGTTCGGGCCCACAGAGAACTCACCTCACTGTACCCGGTGGAAGACGACGCACTCTTTCTAACCCCAAAAAGAACATCCAGTCATCTGACGGCGGACAGGACGCAGATTCAGAGAAGTTAACAACAGTATACGTTACTGTAGGTAAGACCTCCAAAATGGTCAAGCAAGAGCCTCCTTCAGAAGGGCCTGTTCAGGCGATGCTGCGCAGACTAGGAAGCCTCCAGAGGCAA[A/T]AAGAAGAAGTTGCTAAAGGCAAGGCCCAATCGATTGTTAAGCCTCCACGGAGGAAACTAGGTGCCCGAGCCAGTGCATGGGAGCAAGCGAGCGGGTCAGGCCAATCAGAAGTGGTCATGAGGAAACCCAGTCGTAAAAAACACAGCTCTCTCAGCTCTCCATGCATAGTCGGGGCAATAGACTCTCCTCAAGAGAACAGCGCCCCCAAGAGGCCGCTGTCCTCCATTTTAAAAAGTGTTCCTGAGAGTGATCCATTTCAAAGTTTAGAGGTGGAACCGAACAGTGAGGAGACTGGCATACAGACTGAGCACACTTATGAGACTGTGGCTCTGCCTGACACTGTGTCCACCTCTTCAGAGATTATTATTAATGACACAGTTATGGACCAAGCAGAAAATGAGCCCAATTATGAGAATGTTTATTTAAAGCATTGATAACACTGCTACATCTTATGCTTTTAAGAGTGTGTTCACAATTTAATTATTTTGGTTTAACAGATT
Associated Phenotype:
Not determined