ZMP

supt5h

Ensembl ID:

ENSDARG00000042724

ZFIN ID:

ZDB-GENE-001207-1

Description:

Transcription elongation factor SPT5 [Source:UniProtKB/Swiss-Prot;Acc:Q9DDT5]

Human Orthologue:

SUPT5H

Human Description:

suppressor of Ty 5 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:11469]

Mouse Orthologue:

Supt5h

Mouse Description:

suppressor of Ty 5 homolog (S. cerevisiae) Gene [Source:MGI Symbol;Acc:MGI:1202400]

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa42529	Essential Splice Site	Mutation detected in F1 DNA	Not yet available
sa13309	Nonsense	Available for shipment	Available now

Mutation Details

Allele Name:

sa42529

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

G > A

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000062674	None	None	855	None	23
ENSDART00000062676	Essential Splice Site	105	1084	5	30

Genomic Location (Zv9):

Chromosome 15 (position 19333190)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	15	20435816
GRCz11	15	20371548

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

CCTGCCTTTCTTCCTTCCTCAACGCTGGATCTGAGCAGAAGAGGCTGAAG[G/A]TATGTGCTTAAATCTTCTGGAGTGCATGGATATTTGTTTTTTTGTCAAAC

Long Flanking Sequence:

GTTTAAGACCATTGATGTTCAATTTGCTTACAAGGAGCATGGATGGCAAATACAGTTTGAAATGGCACTTTTTTTGCTTTTGCATAATTTAAAAAGTTAAGAAAAGGCTTTTAAAATACAACACTCACAGAATAGGGGAGTGATTAGTGGGGACTGACTGAGTTCTGAAAAGGAACTAACTCTATGGTCATTTGCCTGAAAATGCTCCTTCGAACACAACGGAAAACCCAATTCCTTCTGTTGATAGTGTTCAAATGTGTTTATTGTATTGCATCAGCTAACAGTGACATGACATCATTTTCATGTAGTTTCCATTTTTAAAATGTCAAAAGTGTTGTCAGCCTGCCCATCAGTGTTGATTTTTCTTTTTATTTCTGTTTACCTGGTTCTGTCTGTGCCTGAAATTGATGTGTGCTCATGACATTGTATTTTGGCACATGTTCCTCCCTCCCTGCCTTTCTTCCTTCCTCAACGCTGGATCTGAGCAGAAGAGGCTGAAG[G/A]TATGTGCTTAAATCTTCTGGAGTGCATGGATATTTGTTTTTTTGTCAAACTATGTGATCTGAAGCTGTGTTTACTTGCTCTGCTTTGGTTTTTAAAAATACATGTATGAATTTAAAGACAAAATTATTAGCCCTTAATTAGGCAATTCATTGGACAACATTGGCTTGGTCTGTAGCCAATTGAAAAAAATATATATTTTAAAGGTAATAATAATATCGAAAAACATTTATTTATCCAGCCAAACTAAAAGAAAGTAGGCTTTCTGCAGAAGAAAAAAAATATTATGGGAAATACTGTGAAAGTTTTCTTGTTCCATTAACCCATTTAATCCCACCTGGAACTATAGTTGCTGTTCATAATGGTAAATAATTAAAATATGTATTTTCATATATATAAATATTTATATATAATAAAAATATTTAAATAATATTTAATATAATATTTATTTGGAAATTCACAGGTGGGCTAATAATTTTACCTTTAACTGTATATCGTTTTTT

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa13309

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC
Order Allele From EZRC

Mutation:

T > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000062674	Nonsense	222	855	10	23
ENSDART00000062676	Nonsense	223	1084	11	30

Genomic Location (Zv9):

Chromosome 15 (position 19335962)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	15	20438588
GRCz11	15	20374320

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

CAGCCACTTCAAAWCAAATCAGTAGTTGCCCCTGAACATGTCAAAGGTTA[T/A]ATCTATGTGGAGGCGTACAAGCAGACCCAYGTCAAGGCTGCCATTGAGGG

Long Flanking Sequence:

CAGTGCACTGACACGGTACGTTTTTCATAGTTCCTCTCTCTTCTTTAGACCCATTTAGTTTGTCAAGAAAGTTTAAGTGCCATGGTTGGTGAATATCCGATTCACACAATCTCAGCCATTGGTATATAAGACACAAACTGTACAATCTTCATCGGAGCTTAATAAGGATAGGAGATTAACTCCCCATTTTGTGTAGTTAACTGGGGCCTCATACATGAAACATTACGTCATGAAAATGTACTTGAAAGTTCTGGAAAAGTCATGGAATTTTAGTAGTAAAAATGTGTATGAACCGTGATTTTAGAGCAGTAATCACAATACCGTGAAATCGTGATATTTTTATCCAAGGTTATCATACCGTCACAATCTTATACTGACCCATGCCTACGATAGATATTAAAGGAGTGCTACAGAGTGGAGAGGATTAACTTTGTGCTTTGTTTCTTTGTACAGCCACTTCAAATCAAATCAGTAGTTGCCCCTGAACATGTCAAAGGTTA[T/A]ATCTATGTGGAGGCGTACAAGCAGACCCATGTCAAGGCTGCCATTGAGGGTGTGGGAAACCTGCGCATGGGCTTCTGGAACCAGCAGATGGTGCCCATTAAAGAGATGACAGATGTGCTGAAAGTGGTTAAGGAAGTGACTAACCTTAAACCCAAGTCTTGGGTTCGTCTCAAGAGAGGCCTTTATAAAGATGACATTGCCCAGGTGAGTACTTGGACATATAGATGATGTATCTGGAAAGGAGTCCCTGTTGTTGATACTATAATGTGTTCTGGAAATAATTATTAGGTTTGTTAGTCATACAGCTCTGCTTATGTCTGTGATAAACCTTTGATCTGTGTTTTTTTATTTATCTTTTTCAGGTGGACTATGTTGAACCTAGTCAGAACACGATTTCGTTGAAAATGATTCCTCGTATTGACCTGGATCGTATCAAAGCAAGGATGAGTATGGTAAGGTTCTCAATTTTTACAAAAACAGCACAATATATCTTAATATTT

Associated Phenotype:

Not determined