ZMP
si:ch211-232m8.2
Ensembl ID:
ZFIN ID:
Description:
Novel protein similar to vertebrate lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte
Human Orthologue:
LCP2
Human Description:
lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa) [Source:HGNC Symbo
Mouse Orthologue:
Lcp2
Mouse Description:
lymphocyte cytosolic protein 2 Gene [Source:MGI Symbol;Acc:MGI:1321402]
Alleles
There are 5 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa22518 | Essential Splice Site | Available for shipment | Available now |
| sa42420 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
| sa42421 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa28340 | Splice Site, Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa22518
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000052605 | Essential Splice Site | 60 | 482 | 3 | 18 |
| ENSDART00000131424 | Essential Splice Site | 60 | 405 | 3 | 15 |
Genomic Location (Zv9):
Chromosome 14 (position 35634493)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 14 | 34163770 |
| GRCz11 | 14 | 34504084 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TAGAATATGACTGATAAGGATCTTAAAATGTTTCCCACGCCACATATTCC[G/A]TAAGTATTAATCTCAACAAGAACAAATATCTCAGAAAGATGGCAAAAATG
Long Flanking Sequence:
ATCTTTTAATTATGTTATGCACCATTGAAGGTGAAATATTCAAATGTCTTCCTATCTTTATTTGAGAAACATCAAAGTGATCCTCTGCCCATTTTTGCTCCTAAAGGGCTACACCTTTCTTGGATACTGCTTTTGTACCAAATCATAATTATGATCACCTGTTTCAAATTACATCATTATTTAACCAAGACCTAATATATATATACATACATAATAGAATACATACTTATTTAGAAAAAAATAATAATGATCGGTAAATAAGTTTTGTTGTATTGTCTGCAATGATATACAAGTCAAAGCAAATATAGAAATCTCTACTTTTTAATTTTTTCATTTCAGTTTTCCATACTGTCCCAACTTTTTCTGATTTGGGGTTTTACATGCTTTGAAATGTGCCTAGACATGCCAGATTGCAATACAGAACAAATAATTCTTATATCCATCTTGTTCTAGAATATGACTGATAAGGATCTTAAAATGTTTCCCACGCCACATATTCC[G/A]TAAGTATTAATCTCAACAAGAACAAATATCTCAGAAAGATGGCAAAAATGAATAAACTTAAGATTTTGATTGAGGAGAAAAAGGATGCACCTACTGGCCCTGCTCTTACTGATTTCCCGGTCACTATTTCTAAACAACTTGCAAAACAAGTTATATTTCTGAACCATGACCATACCATTGCTAGGATCCCACTTTAATAATAATAATATAAGCCTATTGATATTTATTTTTTCATTTTCTTTGGCTTAGTCCCTTTAATTATCAGTAGTCGCCACAGCTGAATGGATCGCCAACCTATCCAATTTTACGCAGCGGACGCCCTTCTAGCCTAGAGCTGCACGATTCTGGCTAGAATAAGAATTGAATTTTTTTTGCCTAAAATAAAGATCACGATTTTCTCACGACTCTGTGGATATAAAATAAAGGTTAATAATTATTGTTATTCTCAAACATGTAGTAAAACAGCAATAGGCTGTGTAGCTCTACTGTTGGTTAAAATG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa42420
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000052605 | Essential Splice Site | 88 | 482 | 6 | 18 |
| ENSDART00000131424 | None | None | 405 | None | 15 |
Genomic Location (Zv9):
Chromosome 14 (position 35637258)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 14 | 34166535 |
| GRCz11 | 14 | 34506849 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CAAATATGGTTTTGGACCCATTATATGCACAATCTAAAATGTTTATATTT[G/A]ATTTTCATTGTACAAAAGTAGAACCTACTTCAGGAGGTTGGGATTCTGAT
Long Flanking Sequence:
TATTTTATGTATAGGCCAGAATATTTATTTTTGTGTTACACTGACTGATAGCGATAATTTTAGTTTCACAGAAGTTATTTGACTGTTTAAAATTTACCCAATTTAGGCAAATTTACCTGCATTTGATATGCTTTCTCTATAAATAAAATCTCTTTTATTGCTACCTCTCGTTTCGAGCTTGTAATGACCTCTTCTGTTATTCTGACTTTTTTCTATGTGAAAGATTTATCACAAAAATCTGCAAAGACATTAACCAGAACAACAAAGAAAAGAAGAGCCTATTTCACAGGTAAGCAAGATGACCTATTTTCTAATTATTGTTTGGCTAATAATAAAACCCAAAACTGAAATACCTCTATGTGCTTGAGTTTGTCAAGTTATGAATCTTTGTCTCGACTAGATCAGATCATAGGAAGCCTCCAAACCAAGGTAAATTTTGTCAAATATAAACAAATATGGTTTTGGACCCATTATATGCACAATCTAAAATGTTTATATTT[G/A]ATTTTCATTGTACAAAAGTAGAACCTACTTCAGGAGGTTGGGATTCTGATGAATTCGTAAGTCTTGGTGTCACAGTTTTTTTTAAGTTCTTAAACATTTTGACAATTAACAATTAATATAAGTGCATCTGTTTTTCTAGGACCAAGAGGATAGTGACAACGACTATGAGGAGCCAGATAATAATGAGTTTGAAGACAATTACATATGTGCAGCCTCAGGTGACCCTGCAGAAAATGTAAACTCTGATGATGACTACGAAGCACCTCCTAGTGAAATACCATCAGAAATACCAACTCACTTTCGGGCTGCCAAGCCTATGGGTGACGGTGATTATATAGGTACCATCAAAATCACTCTACACATGAACGCATCCATCCATGTATTCAATTTAGAAATAATAACTCACCGTTTTGCTGTGTGCCTTTTGTATAGACACCTGCCCACGTGGTTCTGCAAGACCACCACAGGACAACAGTTCAGGTCGGCTTCCCAGAGGGCTT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa42421
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000052605 | Nonsense | 388 | 482 | 16 | 18 |
| ENSDART00000131424 | Nonsense | 311 | 405 | 13 | 15 |
Genomic Location (Zv9):
Chromosome 14 (position 35639188)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 14 | 34168465 |
| GRCz11 | 14 | 34508779 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATGTGGGGCAAATATCACGAGGAGAGGCCGAAGTCTCACTAAGAAAAGTG[A/T]AAAAGGTGAGTGGTATCACATTTTTGATTTACCTTAAATATATCCCTCAT
Long Flanking Sequence:
AAGGTGAGTCTATTTATTAGCAGTGTGCATTCTGGCTTGTGAAATAAGTGAGCTTACTTTAGTGAATCTTCAACACAGATTTAACATGCAACAGATGGATGACTTTCCTCCTCCACCTGTAGAAGTAAATGAGAAGATGGAGCAGGTGAGCAAAATCACACGACAGTAAGCATCTCACAAGTAAAAAAAAAACAATGACCTCACACCCAAACCATGCAAATTGTGTTGACAACCACAAGATGGCACTGTTGTTTCACGGGGAGGCATGTGTTTTGTTAGGCAATGAAGCTAAACAAAGGAAATCCAAGCCCACATGCCTTGTGCATCATTTTCCCAACACAGAAACTTCAATGTGTTTCCGTTTGTAATAATCATATTAATCACATACTGTGAACCACTCTGTAAACAATGCATTTTAGATATGCTCTCAGGACATGGATCCTCAATGGTATGTGGGGCAAATATCACGAGGAGAGGCCGAAGTCTCACTAAGAAAAGTG[A/T]AAAAGGTGAGTGGTATCACATTTTTGATTTACCTTAAATATATCCCTCATCTAAAATAACAATTTTAAGATATAATTAACTAGAAATTAAAGCCACAATAAAAAATACTTCATATACTAAGAGAAAGAAATTATGCAGGAAAAATATGAAGACATCTACATTCTCAGTGTTGGATATTCTGTTTTAGGATGGTACTTTTTTAGTGAGAGACAGCTCAAAGGGCTGTGAGGAACAACCATACACACTAATGGTACTGCACCAGCAAAAAGTGTACAACATCCAGATCCGTTTCCTTGGAAACAAGGATGGATATTCCCTAGGAACAGGACTAAATGGCATCGAGGTAATGGCATCTGTTGATTTTGACAGAAATGTTTATCTTAAATATGTCCTGAACACCCCTTTAACATCTGACATGTGAAGCAAGCCTTTACAAATAAAATTTTTTGGAATGGAGCCGTTTATCGAACTGTCGAATGAAACACTGTGGTTTTGTTGGG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa28340
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > T
Consequence:
Splice Site, Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000052605 | Splice Site, Nonsense | 441 | 482 | 17 | 18 |
| ENSDART00000131424 | Splice Site, Nonsense | 364 | 405 | 14 | 15 |
Genomic Location (Zv9):
Chromosome 14 (position 35639529)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 14 | 34168806 |
| GRCz11 | 14 | 34509120 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCCTTGGAAACAAGGATGGATATTCCCTAGGAACAGGACTAAATGGCATC[G/T]AGGTAATGGCATCTGTTGATTTTGACAGAAATGTTTATCTTAAATATGTC
Long Flanking Sequence:
GAAACTTCAATGTGTTTCCGTTTGTAATAATCATATTAATCACATACTGTGAACCACTCTGTAAACAATGCATTTTAGATATGCTCTCAGGACATGGATCCTCAATGGTATGTGGGGCAAATATCACGAGGAGAGGCCGAAGTCTCACTAAGAAAAGTGAAAAAGGTGAGTGGTATCACATTTTTGATTTACCTTAAATATATCCCTCATCTAAAATAACAATTTTAAGATATAATTAACTAGAAATTAAAGCCACAATAAAAAATACTTCATATACTAAGAGAAAGAAATTATGCAGGAAAAATATGAAGACATCTACATTCTCAGTGTTGGATATTCTGTTTTAGGATGGTACTTTTTTAGTGAGAGACAGCTCAAAGGGCTGTGAGGAACAACCATACACACTAATGGTACTGCACCAGCAAAAAGTGTACAACATCCAGATCCGTTTCCTTGGAAACAAGGATGGATATTCCCTAGGAACAGGACTAAATGGCATC[G/T]AGGTAATGGCATCTGTTGATTTTGACAGAAATGTTTATCTTAAATATGTCCTGAACACCCCTTTAACATCTGACATGTGAAGCAAGCCTTTACAAATAAAATTTTTTGGAATGGAGCCGTTTATCGAACTGTCGAATGAAACACTGTGGTTTTGTTGGGTATTGTATTTTTACCTTTAGGACTTTAATAATATTGTGTGGACCCTTAATTAAATTATTCCCTCACTGAGGAGTACAGACAAAACTATATAATAATTCGCTGGTCAAAAGTTGGGGGTCGTTTTGTTTTTCTTCATCAAGGCGGCATTTATTAAATGTAAAAAAATAAATAAAAAATTTAAATACTTATTTATTAAATATTTATTACTTGTTGTACATATTTTAGATGAAATTATTAGTCTAGTCATTATTGCTTTTATTACTAATTACCATTATTATAAATTAATATTAGAGTAATTTCTGAAGGATCATGTGAATATGAAGACTGGAGAAATGAAGCTG
Associated Phenotype:
Not determined