ZMP
gpc3
Ensembl ID:
ZFIN ID:
Description:
Glypican 3 [Source:UniProtKB/TrEMBL;Acc:Q6V9Y8]
Human Orthologue:
GPC3
Human Description:
glypican 3 [Source:HGNC Symbol;Acc:4451]
Mouse Orthologue:
Gpc3
Mouse Description:
glypican 3 Gene [Source:MGI Symbol;Acc:MGI:104903]
Alleles
There is 1 allele of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa42411 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa42411
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000039554 | Nonsense | 128 | 507 | 3 | 8 |
| ENSDART00000129345 | Nonsense | 104 | 483 | 1 | 6 |
| ENSDART00000143894 | None | None | 54 | None | 1 |
Genomic Location (Zv9):
Chromosome 14 (position 32195140)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 14 | 30984947 |
| GRCz11 | 14 | 31325261 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCTGGAAAGGGAGCTCTGCTTATGGGTCATTTCCCAAGATGATGATGACC[C/T]GACTGTCCCGCTCACTCCTGGCCACTCGGGTCTTCCTGCAAGCGCTGAAT
Long Flanking Sequence:
TTCTGCACACTGGGGGTGGTGTGAAGGGATCCCCCGTCATGATTGTGGAGCTCTTTGGGTGTATGGCCATACACGATAAATGCACTACATAAATACACACAATACATTTCAGCACATTATCACTGTGGTGTTGGAATGTAACTAAAATCAAACTTTATAGTTACTCAATCTCTCTTTTCTGTCTTTTTTCAGAGGCTTTTGACATGGTGCTTCGTCTGGGCCGTAATTCCACTCTGATGGTGTTACGCGAGGAGTTTCCTGGTTTGGGGGCTGGAGCCAGCGGAGCCGTCACGCAGTTATTCCTGGATATGTCACTTTACATTCTGGGCTCTGATGCCAATGTAAACGACATGGTCTCCACCTTCTTCTCTCGCCTTTTCCCTCTCACCTACCGTCGACTTCTGGGCAATGGGGCCGTGGCGGGCATCTCTGAAGAATGCCTCCGCGGGGCCTGGAAAGGGAGCTCTGCTTATGGGTCATTTCCCAAGATGATGATGACC[C/T]GACTGTCCCGCTCACTCCTGGCCACTCGGGTCTTCCTGCAAGCGCTGAATTTGGGCATAGAAGTGGTCAACACCACTCAGCATTTGCGGGCAGGTAGAGATTGTGGGCGCTCACTTCTGAAACTGTGGTACTGCCCGCACTGTCAAAGCCTGCTGGAGGCCCGGCCGTGCCGTCCACTGTGTGTCAGCACCATGGGAGCATGTTTGGGGGGAACCACGGAGGTACAGCCTCATTGGAGAGCATATGTGGATGAACTGGGGTCACTCGCCGCTGCCATGAAGGGGGAACAGGACATCGAGGCTGTGGTGCTCCGACTGCATGTCATTATCAGACAGGCTCTCAAACAAGCCGTGGCAAGCAAGAGCAAAGTCAGCGCCCAGGTGAGTGACACATGGTCTCAGAAACAAGGTATGAATTCGAATGCTGTAGGCGACTGCAGCCATTTTGCTAACTTCAGCCATTTTTGCTAACGCCATCTCTCTCCAAAACTCAACCTCCAA
Associated Phenotype:
Not determined