Busch Lab

ZMP

srp72

Ensembl ID:
ENSDARG00000014139
ZFIN IDs:
ZDB-GENE-030131-5546, ZDB-GENE-030131-5546
Description:
Srp72 protein [Source:UniProtKB/TrEMBL;Acc:Q6NWC7]
Human Orthologue:
SRP72
Human Description:
signal recognition particle 72kDa [Source:HGNC Symbol;Acc:11303]
Mouse Orthologue:
Srp72
Mouse Description:
signal recognition particle 72 Gene [Source:MGI Symbol;Acc:MGI:1333795]

Alleles

There are 4 alleles of this gene:

Allele Name Consequence Status Availability
sa42323 Nonsense Mutation detected in F1 DNA Not yet available
sa28227 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa42322 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa42323
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > G
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000018981 Nonsense 129 670 7 21
ENSDART00000123627 Nonsense 129 558 7 20
Genomic Location (Zv9):
Chromosome 14 (position 1235124)
Other Location(s):
Assembly Chromosome Position
GRCz10 14 1211698
GRCz11 14 1225321
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTTTTGTAGTTGTACAGATTGGAGCGGTACGACGAGTGTCTGGCTGTGTA[T/G]AAAGACCTGATCAGAAACTCTCAGGACGAGTATGAAGAGGAGAGGAAGAC
Long Flanking Sequence:
GCCACGGCGGAATGAACCACCAACTCATCCAGCATATGTTTTACGCAGCGGATGCCTTTCCAGCTGCAACCCATTACTGGGAAACACCCATACACTTTCATTCACACACTTACACTATGGCCAATATATAGTTTATTTTATTCCCCCGATAGCGCATGTGTTTGGACTTGTAAACCGGAGCACCCGGAGGACCTTCTTGATGTGAGGCCACAGTGCTAACCACTGAGCCGCCAGTTTCTTTCTTTTGTTGAACAGAAAAGGAGATATGTTGGAAACCTGTGTAACCACTGTTATACAATGACTTGCCTAATTACCCTAACTTTACCCTAATTACCCTAGTGAAGCCTTTAAAAGTCACTTTAAGCTGAATCCTAGTGTCTTGAAGAATATCTAGTCTAATATTATTTACTGTCATCATGACAAAGAGAAAATAATCAGTTATTAAACAATTTTTTGTAGTTGTACAGATTGGAGCGGTACGACGAGTGTCTGGCTGTGTA[T/G]AAAGACCTGATCAGAAACTCTCAGGACGAGTATGAAGAGGAGAGGAAGACCAATCTGTCCGCTGTGTTAGCGGCTCAGAGCACCTGGGAAAACGCACCACCGGTGGGAAACACGCACACCATCATCTGTAAACATGATGATTTGGATGAAGTGGCTTTTGTTGCACATGTTTGATGTGCTTTTTCTCTATTCAGGAGGATCTGGGTTTGCCCGAGAGCTCATATGAGTTGTGCTATAACGCTGCCTGCTGTCTGATTGGTCAAGGAGAGCTCGGCCAGGCCATGAAGAAACTGCAAAAAGCTGAAGGTCAGAGATCTATCTATCTATCTATCCATCCATCTATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCGTTCCATCGTTCTATCTATCTATCTATCTATCAACCTATCTATCTATCAACCTATCTATCTATCTATCCATCCATCCATCCATCCATCCATCCATCCATCCATCTATC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa28227
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > G
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000018981 Essential Splice Site 384 670 14 21
ENSDART00000123627 Essential Splice Site 384 558 14 20
Genomic Location (Zv9):
Chromosome 14 (position 1219637)
Other Location(s):
Assembly Chromosome Position
GRCz10 14 1196211
GRCz11 14 1209834
KASP Assay ID:
554-6757.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGCGCATCTGGAATCAAACTCACCATGGCTCAGCTCTACCTGACACAAGG[T/G]AAACACACACACACACACACACACTGGCAGACAAAAATGAACTCTCGAAC
Long Flanking Sequence:
ATTTTTAATTGTTTATTATATTTATTATTGAAATGTTCCTGCCATGTAAATAGCCTCGGTTGCTGGCATGTCATTAAATTAAAAAATACATTACATCACATTACATGACTCGATGAAGCAATTTCACAGTCAAAAATCACATCAAACACAACAGAAGGCTTTGGAGGAGATGTGGATTAAACTAGTGATACACACAGGAGCAATTTCAAGTGGACAAAAACCTGACTAATAAACTCTGATACAGAATCTCAGCAGTGCTGAAGCTGTGGAGACGAGTATAAGCTGTGTAATTGATGATGAACTGTTGAATTATTCATAAAGTAAAGCACACCTGAAGTGTAACAGCTCTGCTTAATTTCTCTAATGATTTAATTAATCCTTAAGCAAGGTAAAGCTAAAATAAACCTGTGTTCTGTGTTTCTGCAGCGGTTTTCAGATCAGCATCCTGAGAGCGCATCTGGAATCAAACTCACCATGGCTCAGCTCTACCTGACACAAGG[T/G]AAACACACACACACACACACACACTGGCAGACAAAAATGAACTCTCGAACAAGTTTAATTTCTATATTGTCGTCAACAGGTCATGTGACCAAAGCCTGTGACATCCTGAAGTCCATAGAAGAATTTAAATACAAGCCAGGAATGGTGAGGTTTCTTTTGTTTTTGGCTTTATGCATGATATTAAAAGGTACAGTGTTTATTTTGCTAGCGCACATTGTTGGCCTCAAAGTGAACAATTAATTCATGCGAGTTAATCCACAGAAAAACCGGTTTGTTTAGGTAATCTTTAATCGAAACATTACAAACTGTTTGTGCATTTGAACGACAGTGCTCTTTTGATTCTGATTGGCTGAATTATGGTTAGCCACACCCTCTGCCCATTACTGTGCTGTGAGAGAAAAAAGCAGACAAATTAAAGCCCCACCCCCTACACAGTGTTCAATTTGTGTTGGGAATACATTATCAAACTAACAGAACAGTGTGCAGCAACTTCTAGTTCA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa42322
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000018981 Nonsense 457 670 17 21
ENSDART00000123627 Nonsense 457 558 17 20
Genomic Location (Zv9):
Chromosome 14 (position 1217119)
Other Location(s):
Assembly Chromosome Position
GRCz10 14 1193693
GRCz11 14 1207316
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGCATCCACCTTTCTCTGGTTCGCGAGGCTGCAAACTACAAGCTGAAATA[C/A]GGCCGTAAGAAAGAGGCCACCAGTGACCTGGAGCAGCTGTGGAAACAAAA
Long Flanking Sequence:
ACTGTAGTTTCTGGCGACATGCGGCATCGGGCACTGCGGTTGCCATAGTTTTGAAATAACTCTGCAATACACATTGTTTCCTTGTAAGATTAGGTCTGCCTGAGTTATTGGGCGTGGCTAAAATACTTAACCACGCCCCCTCCAGCTGTCAGTTTTGACAACAAAGAGAAATGGTGAGCAGGAGGAGGAGTCTGTTAGGTTGTAATAACTCTCCCCAAACCCTTCTCCCCATCTTTCTGAATGAAATGTCTACTTTGCTACATCCAATCAGCTCGCAGTAGACAAAAACAAGCCACGCCCACTGTATACTCATTTAATATTACGTTTCTCTACATCACAATATGAAAAAAAAAGCACTCACAGCTTCTGGTTTATGCAAACTATAAGGACTTTCATGATCCAATCCTAGATGTGCATGATAATCTCAGTCTCTTCCGTTAGCCGGGCTCCAGCATCCACCTTTCTCTGGTTCGCGAGGCTGCAAACTACAAGCTGAAATA[C/A]GGCCGTAAGAAAGAGGCCACCAGTGACCTGGAGCAGCTGTGGAAACAAAACACCAACGACATCCACACACTCGCTCAGCTCATCTCCGCGTACTCGCTGGTGGATCAGGACAAGGCCAAAGCGTATCCTCACACACGCCTGCATCTACTTTGATATAAGAGAGTAAAATTGGATGACACTTTAGTTTGGGTCACAATTCATGCCATTATCTACTAGCCTATTATTAAGACATGAACTGTTTATTAGTAGTTATAAAGTATGAGCTTACTCTGCATCCCTAATCCTACATAAACCTAACATCTACCTTACTTATTAATATACAGCTAATTAGTAGTTTGTTAAGCTGGTATTGTTAGTTAATGCTTTGTTAAATCTGTGAGTTCTGACCTGAAGTGTTACCGAAATAGCCTAGTTTTCTGCTGTGTTTTCCTGAACGCTTGGTTTTGTTCAGTCTGAGTAAACACCTTCCCTCCCCGGATAAAATGGCCTTTAATGTGGAC
Associated Phenotype:
Not determined