ZMP
col19a1
Ensembl ID:
ZFIN ID:
Description:
Novel protein similar to vertebrate collagen family [Source:UniProtKB/TrEMBL;Acc:B8A4T5]
Human Orthologue:
COL19A1
Human Description:
collagen, type XIX, alpha 1 [Source:HGNC Symbol;Acc:2196]
Mouse Orthologue:
Col19a1
Mouse Description:
collagen, type XIX, alpha 1 Gene [Source:MGI Symbol;Acc:MGI:1095415]
Alleles
There is 1 allele of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa22363 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa22363
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000076436 | Nonsense | 395 | 488 | 30 | 34 |
| ENSDART00000145979 | None | None | 617 | None | 30 |
Genomic Location (Zv9):
Chromosome 13 (position 39633719)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 13 | 38947820 |
| GRCz11 | 13 | 39073710 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GAGACTGATGATGTCCCATTTTGGCTCTTTGTCTTTGCACACAGGGAGAA[C/T]GAGGGCCTGTGGGAGAGACTGGCTTCCCTGGACCTGAAGGGCCTCCTGGA
Long Flanking Sequence:
ACTAAATTATGTGAATGAGATCACACAAATTCACACGAATTAGCCACTAAATCCAAAAATTATGAATTGCCGTGAGATAGCATTGAGAATAGACTTATACACTTTAAAATACAGTATGTGCTATGTTCAACAGTCCTTGTCTGCAGAGTAACAGAAGGCTACAGTTCATTGAAGCAGCTGCTGGTTCAGTAGCCTACCACAAGATAAATGTTTTATATTAAGCATAAATCTTTGGATGAAATCTGTACATGCGGTAGCTGGTATAGATAGACAGCAGGTTTGAGATGTAACTCTGAGGTGTAACTCTGTCTCTCCGTCTCATTGCTGTGACTGATAGGGAAAGCCTGGACCGCGTGGTGAGACAGGGATCCCTGGAGAGCCGGTGAGATTTGCTTTGTTGCTTGTTAGCAGCTGTCAGTCATACGGCAGGGTTTGGCAATAGAATGATGCGAGACTGATGATGTCCCATTTTGGCTCTTTGTCTTTGCACACAGGGAGAA[C/T]GAGGGCCTGTGGGAGAGACTGGCTTCCCTGGACCTGAAGGGCCTCCTGGAGCTCCTGTAAGCAATCGCAGCATTTGCTACACTTGTACATCTACAGCGAACGCTAATGACAAACCTGAAGGAAATAAAACTCACTGCAAATTTGCTCTAACTATGTTTCAGTGTAGAGTGACGAAGAATGGAAGTTAACATGGCAGTTTTGTTTTAAAAAGTCACTACAATTTTGAGATAATGTAACACATAGACATAAGATATAGTCAGTGCAGTAGTCAACATTTAAAGTGGTTTAAAACAGTGCTTCTCAACCCCATTCCTGGAGGACCACCGACATTCAACATAGGCTCATTCTGAAAATGCACCCCTATATATTTTTGGAGATCGCAAATTATGTAGCCAGGAGTACGTATGGCTGCATTTCGTCTTTAAAACAAACGCTACAGGGTGGTATGCAGGCCCGGATTGGCTAATCGGGAGGACCGGGAGAATTCCCGGTGGGCCGGT
Associated Phenotype:
Not determined