ZMP
trmt5
Ensembl ID:
ZFIN ID:
Description:
tRNA (guanine-N(1)-)-methyltransferase [Source:RefSeq peptide;Acc:NP_001139055]
Human Orthologue:
TRMT5
Human Description:
TRM5 tRNA methyltransferase 5 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:23141]
Mouse Orthologue:
Trmt5
Mouse Description:
TRM5 tRNA methyltransferase 5 homolog (S. cerevisiae) Gene [Source:MGI Symbol;Acc:MGI:1923607]
Alleles
There are 3 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa2689 | Nonsense | F2 line generated | Not yet available |
| sa42236 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa2689
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000085989 | Nonsense | 6 | 480 | 1 | 5 |
Genomic Location (Zv9):
Chromosome 13 (position 31911477)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 13 | 31557425 |
| GRCz11 | 13 | 31687875 |
KASP Assay ID:
554-2768.1 (used for ordering genotyping assays)
KASP Sequence:
CGCATAGAAATGACGTAGGATAAACGCGTGTTCACATGGCAGCAGTGTGG[A/T]GAAGGTGAGCTGTGGCAGTTTGTTTTTAATATAAGGATTAGGGTANNNNN
Long Flanking Sequence:
CACAATAATCCTAAAGACTACTTCTAAATAGTTTGTTATTTAGAGGACGGCTTAACCTCGTTCTTTAGTCATCATTTAGACATGTTAGACATGGACACGGTTCTATTTGTTGTTCTACAATATTTATTTATGAATGTCAGTGTTATAGGGAAATGACAGGTTTGTGGTTTACCTGCGGTAACAGCGGTGTTCTCTCTTCATCTTCTCCGATGGGCTCATACTCGCTCACCGTCTGTATGCTGTGGTTTGCGCCGTTTCTCCCCATGTCCCACCGTGTAGTGTTTCTTTATTCCCTACTGAACCGACAAAAGGCGCAACGCTCGCGCTCAGGTACTACCGGAGCCGTCAGTACATTTCTCTGGTTCCCCAAACCACCGGCTCTAGCAAACGTAAACAGCCATTCACGTGATTCTCGACGGTCAATTTATATTTTCCGTCACAGACCCAGGTCGCATAGAAATGACGTAGGATAAACGCGTGTTCACATGGCAGCAGTGTGG[A/T]GAAGGTGAGCTGTGGCAGTTTGTTTTTAATATAAGGATTAGGGTAACGTTATATGTTTTTATGTGCGTTCGTTGAATAACGCAAATGAAGCTCTGAGGTTATAAGTCATTCTGTAGGATGTCACTAGGCGTAGAAAACAGATTGCTGTGCATCCATGTACACTAAATTTGGTAGGCGACGTTACTTCCAGGATTTCGCTGGACATTTTTAAATGGTTTTTACGAACTAACATTTATGATTCTGCGGCAATATTTGTGTGTAACTTATGTGTTGCTTAACAGCAAAGATAAACAAAAAACATTGTTAAGGAAAGTATATTACTTTTTTATCTAAAATAGAGTATTGGGCTTCACCTTTTACATAAAAGCAAGTAAAAGAAACGGTTGAAAACTCAACAAGTAGTGTACACTAGCAAATCAATTAGCATTAGAAAAGAAAATCTTGCTGAATTTTTTTAGCATGTGAGAGCACTGCATTGTGTTTCCCAATACTATTAAAAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa42236
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > C
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000085989 | Essential Splice Site | 7 | 480 | 2 | 5 |
Genomic Location (Zv9):
Chromosome 13 (position 31909830)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 13 | 31555778 |
| GRCz11 | 13 | 31686228 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TAAATTCTAGGTACACAGGCCATAACTCCATCTCTCTCTTTTTCACCAAC[A/C]GATCTGCCAGACTTTTCATCCTCCTGCAGAGACATCACAGTTGTACATTT
Long Flanking Sequence:
CAGTAGAAAAAATCTTTAACGCTGGATTTAGGGCAACTAATTATATACATTTTATGCAAGCTATGTGCTACACTTTTGTTAAAATAAAATAATTTATTTTTAGCATCATAAATGGCAAGATGGCTGTTTGTGCATCCAAGTAAAACTTTACTAATTCTTTTATATTCTCACTATATATCATTCGGTCCATGGACTGTTGTATGGGGGTTTCATGGTGTTTGGCTATTTGAACACAAAGGCTGTAGCATGTAAACAGACTGATGGTTTTCAGTGGTTCACTGACTGGGAGTGACAGATGCATAGATAAAGTAACTACGAGTTTAGCGATTGATTTAACGCACACAGCCTGGTGGACTTTGGCTAAATGTACAGGTAGCAATGCATCCACAGCTGCTTAAAATCTGCAGGACATCTAAGGCAATTTTAAAAATTCTGAACTTTTTTCCTCAATAAATTCTAGGTACACAGGCCATAACTCCATCTCTCTCTTTTTCACCAAC[A/C]GATCTGCCAGACTTTTCATCCTCCTGCAGAGACATCACAGTTGTACATTTACATCTCAGAATTTAAACCATTTTATGAGGTCTCAGAAAGTCATGACTGACCAATCACAGACCGATCTGGGCCTCTTCAAGCCCCCTTCCACTGTACGGGGCATGACAGAACTGGACCGCTCTGCTTTCAATCAGACAGTGAGCGTTCCCGCCATACGGTTACCAACCAACATTCTCAACAAAGCAGTGAAAAGTTTGAAGAAAGTGGCATTACAGAGGCCAGGACTCAAGCGTGTTGTGGAGGAACACAGTGAAGATGGAAATGCAGACTGTGGTAATATTGAACATCGGCTGCTGTTATTGGACCCAAACAGCATTACATCTTCAGACTCGTTTGGCAGTGATGAGGCAGAAGCTCTGAAAGCTTATAGCGTGCCTCAGGAGATCCAGAGCTATGAACTGAAACTCACCTATGAGAACTTTAAAAGCGAAGAGATTTTGCGAGCTGTT
Associated Phenotype:
Not determined