Busch Lab

ZMP

lrrc9

Ensembl ID:
ENSDARG00000054352
ZFIN ID:
ZDB-GENE-080917-56
Description:
leucine-rich repeat-containing protein 9 [Source:RefSeq peptide;Acc:NP_001107274]
Mouse Orthologue:
Lrrc9
Mouse Description:
leucine rich repeat containing 9 Gene [Source:MGI Symbol;Acc:MGI:1925507]

Alleles

There are 7 alleles of this gene:

Allele Name Consequence Status Availability
sa9718 Nonsense Available for shipment Available now
sa22336 Splice Site, Nonsense Available for shipment Available now
sa1345 Essential Splice Site, Missense Available for shipment Available now

Mutation Details

Allele Name:
sa9718
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000076533 Nonsense 478 984 11 21
ENSDART00000100719 Nonsense 514 1350 13 30
ENSDART00000114995 Nonsense 478 985 12 22
ENSDART00000141217 None None 258 None 7
ENSDART00000146752 None None 447 None 11
ENSDART00000148112 Nonsense 257 626 6 13
Genomic Location (Zv9):
Chromosome 13 (position 31709467)
Other Location(s):
Assembly Chromosome Position
GRCz10 13 31355415
GRCz11 13 31485865
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CTYTYTCTAACAGCATGAGTGTGTCTGATCGACTGAGAATGACTTTCATG[C/T]AAAGGATGARCTGCTCAACATCAAACCGAGAGCTTCTACCCTTCAGATAC
Long Flanking Sequence:
CTTGCACTGTAAAACATAATGAGCTCTTTATGATTATTTGAATGCTTTTGCTTTAATTAGTATTAGTCATTCCAAATGAATTAATCAAATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTTGTGTGTGTGTAACAGGAACTATAAACGCAATATGGAGTATCTGTTCTATGTGCCTGATCCAGAACATTCCTGTGAAAATGATGAGATGCTACAAATCCCAGAAAATGGTTTTAAAAGTGCTGATGCTTATAAGGTACAAATGCTAAAAAGCACAGGTAGGAGTGAGTGTGCATTTATGTTGTTTCAAAATCAACCCATTATCTTAAAGATAAATGTGTGTTTGTTTGTGTGTTGCCTTCAGGCATTAGGCAGAGAGAGAGCCGTCCCTTTTTCTAACAGCATGAGTGTGTCTGATCGACTGAGAATGACTTTCATG[C/T]AAAGGATGAGCTGCTCAACATCAAACCGAGAGCTTCTACCCTTCAGATACGGTCTGGATTCCCTCAGAACACCTAAATAAATAAAATAAACATTACTAGTGGCACCAAACTATAACAGAAAACTTTTTAACAGTTCCATTTATTTAAATAAACAGGTAACTTGTGCAAAAGCAACCCAGTAAGACCAAAGATACACAAGATTGCAGTTATACATCACAATGTACATACATAAACAACATATCTCAGTTCAATGCAAAGGAGACATTGGCTTTGGAGTTGGCATAGCAAAGCCTACAGCGAACAACGTTTGGGACTACAAAAAAAAATCATCTGGGCTAGTGAGATCACAAGGGTTTGCGGTTACATGTATTCACTACGCACACACCCTGTGCAGCGAAGGGGTGTGACCAGAGGTGATGTAATGTTATAGCAGAGAAAGCTAAAATGTCGTCCAAACACTGCTATTTCCACAGAGCTTCTTCTGTTTTTGTATTTGGGCT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa22336
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Splice Site, Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000076533 Nonsense 535 984 12 21
ENSDART00000100719 Splice Site None 1350 None 30
ENSDART00000114995 Nonsense 535 985 13 22
ENSDART00000141217 None None 258 None 7
ENSDART00000146752 None None 447 None 11
ENSDART00000148112 Nonsense 314 626 7 13
Genomic Location (Zv9):
Chromosome 13 (position 31711555)
Other Location(s):
Assembly Chromosome Position
GRCz10 13 31357503
GRCz11 13 31487953
KASP Assay ID:
2260-6614.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCGATCATTATCCCAAGGCAAACTCAGTCTACCTCAGTACCAGCTCTAAA[C/T]AACAAAGTCACACAGCTCAAACAACCCCTGGTGAGTTTAAGCACGTGACC
Long Flanking Sequence:
ACATTCCACAAATCAAACACTGATTTTTGTGCTCAAGAAACATTTATTTTTATCAGTGATTAAAATAGTTTGTGCTCTCTAATATGTTTTTGTAAAAAGCATGATGCAGTTTTCAGGAATCTTTGATGAAGGAGGAAGCTCAAAGTAACAAATTTGCAACCAATATATTAAAATCCTTCTAAATGTTTTATGAAGTGCCAATGTTGACACTTTTAATCAATTCAATGCATCCTTGCTCATTAAAATGATCCATTTTCCTAACAAAATCTTACTGACTTTAAACTTTGGAACTGTGGAATGCATACAATATGAATATCTGTAATATCTGGACGGTCTGACATTTGATTGTGTTTGTTTTCATGCATTTGTTTGCATTTTTAGGTCAGTTAATAATATCTAAAGTGTTCCTGGGTCGTAGTGTTGCAGTAAAGGATGGTCTTCCCATAGACTGCGATCATTATCCCAAGGCAAACTCAGTCTACCTCAGTACCAGCTCTAAA[C/T]AACAAAGTCACACAGCTCAAACAACCCCTGGTGAGTTTAAGCACGTGACCCATAAGAAAAACAACATGTATTCAGGGTAATAGCGATCAAAGTAGCAATATGTGTGTGTGTGTGTGTGTGTGTTTATCAGACATGCTGTGTTCCTCCAGCCTGCCGAACAGCTGTGACTGTAAACAGCAGCAGAGACTGTGGTATATGTTTGACCACGAAATGGTACTTCCAGAATACCTTGTGGACTTTGAATATGTAACCCAGGTATTGGTATATGTTATTATATTTACACTTATACATCCACACTAGAATGTATTAGTCAGTAATTAAATTACGTTTATTTCTCTCTAGGACACAGTCCAGGCTTCTCCAGATTCCCCATCCAGTTATCATATGTCTCCTGCTGATGCCCCATCTGTGTCCTATACTGCGCTGGAACTGGATGAGGAGGCATTAAACATGGAGCCCATCCTGAAGTCCCACCCCAAGATGCTCAGCCTAGATGAGAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa1345
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > C
Consequence:
Essential Splice Site, Missense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000076533 Essential Splice Site 586 984 13 21
ENSDART00000100719 Missense 616 1350 15 30
ENSDART00000114995 Essential Splice Site 587 985 14 22
ENSDART00000141217 None None 258 None 7
ENSDART00000146752 None None 447 None 11
ENSDART00000148112 Essential Splice Site 365 626 8 13
Genomic Location (Zv9):
Chromosome 13 (position 31711812)
Other Location(s):
Assembly Chromosome Position
GRCz10 13 31357760
GRCz11 13 31488210
KASP Assay ID:
554-1259.1 (used for ordering genotyping assays)
KASP Sequence:
CGAAATGGTACTTCCAGAATACCTTGTGGACTTTGAATATGTAACCCAGG[T/C]ATTGGTATATGTTAKTATATTTACACTTATACATCCACACTAGAATGTAT
Long Flanking Sequence:
CTAACAAAATCTTACTGACTTTAAACTTTGGAACTGTGGAATGCATACAATATGAATATCTGTAATATCTGGACGGTCTGACATTTGATTGTGTTTGTTTTCATGCATTTGTTTGCATTTTTAGGTCAGTTAATAATATCTAAAGTGTTCCTGGGTCGTAGTGTTGCAGTAAAGGATGGTCTTCCCATAGACTGCGATCATTATCCCAAGGCAAACTCAGTCTACCTCAGTACCAGCTCTAAACAACAAAGTCACACAGCTCAAACAACCCCTGGTGAGTTTAAGCACGTGACCCATAAGAAAAACAACATGTATTCAGGGTAATAGCGATCAAAGTAGCAATATGTGTGTGTGTGTGTGTGTGTGTTTATCAGACATGCTGTGTTCCTCCAGCCTGCCGAACAGCTGTGACTGTAAACAGCAGCAGAGACTGTGGTATATGTTTGACCACGAAATGGTACTTCCAGAATACCTTGTGGACTTTGAATATGTAACCCAGG[T/C]ATTGGTATATGTTATTATATTTACACTTATACATCCACACTAGAATGTATTAGTCAGTAATTAAATTACGTTTATTTCTCTCTAGGACACAGTCCAGGCTTCTCCAGATTCCCCATCCAGTTATCATATGTCTCCTGCTGATGCCCCATCTGTGTCCTATACTGCGCTGGAACTGGATGAGGAGGCATTAAACATGGAGCCCATCCTGAAGTCCCACCCCAAGATGCTCAGCCTAGATGAGAAAGCCATACTGACAGCGGCCAGAGCGAACATTCTCAGTCAGATCACAGTGAGACTTACAATACCCCAAACACATAAACTCATGCATTTGTAGTATGTAGGTCAGTCAGGCTCTGTTTCTACATTGTATTGACCTGAAGTGGTTGTTCGATGACAAATGATCACACAAGACCATTTCTTATGATGTCAAACATAGTGATATTTTATAAACATATTTCAGGAGAAGCATGCACAGATGTTCTATCTTAAACTTCTTCTTT
Associated Phenotype:
Not determined