ZMP
lrrc9
Ensembl ID:
ZFIN ID:
Description:
leucine-rich repeat-containing protein 9 [Source:RefSeq peptide;Acc:NP_001107274]
Mouse Orthologue:
Lrrc9
Mouse Description:
leucine rich repeat containing 9 Gene [Source:MGI Symbol;Acc:MGI:1925507]
Alleles
There are 7 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa9718 | Nonsense | Available for shipment | Available now |
sa22336 | Splice Site, Nonsense | Available for shipment | Available now |
sa1345 | Essential Splice Site, Missense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa9718
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000076533 | Nonsense | 478 | 984 | 11 | 21 |
ENSDART00000100719 | Nonsense | 514 | 1350 | 13 | 30 |
ENSDART00000114995 | Nonsense | 478 | 985 | 12 | 22 |
ENSDART00000141217 | None | None | 258 | None | 7 |
ENSDART00000146752 | None | None | 447 | None | 11 |
ENSDART00000148112 | Nonsense | 257 | 626 | 6 | 13 |
Genomic Location (Zv9):
Chromosome 13 (position 31709467)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 13 | 31355415 |
GRCz11 | 13 | 31485865 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CTYTYTCTAACAGCATGAGTGTGTCTGATCGACTGAGAATGACTTTCATG[C/T]AAAGGATGARCTGCTCAACATCAAACCGAGAGCTTCTACCCTTCAGATAC
Long Flanking Sequence:
CTTGCACTGTAAAACATAATGAGCTCTTTATGATTATTTGAATGCTTTTGCTTTAATTAGTATTAGTCATTCCAAATGAATTAATCAAATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTTGTGTGTGTGTAACAGGAACTATAAACGCAATATGGAGTATCTGTTCTATGTGCCTGATCCAGAACATTCCTGTGAAAATGATGAGATGCTACAAATCCCAGAAAATGGTTTTAAAAGTGCTGATGCTTATAAGGTACAAATGCTAAAAAGCACAGGTAGGAGTGAGTGTGCATTTATGTTGTTTCAAAATCAACCCATTATCTTAAAGATAAATGTGTGTTTGTTTGTGTGTTGCCTTCAGGCATTAGGCAGAGAGAGAGCCGTCCCTTTTTCTAACAGCATGAGTGTGTCTGATCGACTGAGAATGACTTTCATG[C/T]AAAGGATGAGCTGCTCAACATCAAACCGAGAGCTTCTACCCTTCAGATACGGTCTGGATTCCCTCAGAACACCTAAATAAATAAAATAAACATTACTAGTGGCACCAAACTATAACAGAAAACTTTTTAACAGTTCCATTTATTTAAATAAACAGGTAACTTGTGCAAAAGCAACCCAGTAAGACCAAAGATACACAAGATTGCAGTTATACATCACAATGTACATACATAAACAACATATCTCAGTTCAATGCAAAGGAGACATTGGCTTTGGAGTTGGCATAGCAAAGCCTACAGCGAACAACGTTTGGGACTACAAAAAAAAATCATCTGGGCTAGTGAGATCACAAGGGTTTGCGGTTACATGTATTCACTACGCACACACCCTGTGCAGCGAAGGGGTGTGACCAGAGGTGATGTAATGTTATAGCAGAGAAAGCTAAAATGTCGTCCAAACACTGCTATTTCCACAGAGCTTCTTCTGTTTTTGTATTTGGGCT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa22336
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Splice Site, Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000076533 | Nonsense | 535 | 984 | 12 | 21 |
ENSDART00000100719 | Splice Site | None | 1350 | None | 30 |
ENSDART00000114995 | Nonsense | 535 | 985 | 13 | 22 |
ENSDART00000141217 | None | None | 258 | None | 7 |
ENSDART00000146752 | None | None | 447 | None | 11 |
ENSDART00000148112 | Nonsense | 314 | 626 | 7 | 13 |
Genomic Location (Zv9):
Chromosome 13 (position 31711555)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 13 | 31357503 |
GRCz11 | 13 | 31487953 |
KASP Assay ID:
2260-6614.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCGATCATTATCCCAAGGCAAACTCAGTCTACCTCAGTACCAGCTCTAAA[C/T]AACAAAGTCACACAGCTCAAACAACCCCTGGTGAGTTTAAGCACGTGACC
Long Flanking Sequence:
ACATTCCACAAATCAAACACTGATTTTTGTGCTCAAGAAACATTTATTTTTATCAGTGATTAAAATAGTTTGTGCTCTCTAATATGTTTTTGTAAAAAGCATGATGCAGTTTTCAGGAATCTTTGATGAAGGAGGAAGCTCAAAGTAACAAATTTGCAACCAATATATTAAAATCCTTCTAAATGTTTTATGAAGTGCCAATGTTGACACTTTTAATCAATTCAATGCATCCTTGCTCATTAAAATGATCCATTTTCCTAACAAAATCTTACTGACTTTAAACTTTGGAACTGTGGAATGCATACAATATGAATATCTGTAATATCTGGACGGTCTGACATTTGATTGTGTTTGTTTTCATGCATTTGTTTGCATTTTTAGGTCAGTTAATAATATCTAAAGTGTTCCTGGGTCGTAGTGTTGCAGTAAAGGATGGTCTTCCCATAGACTGCGATCATTATCCCAAGGCAAACTCAGTCTACCTCAGTACCAGCTCTAAA[C/T]AACAAAGTCACACAGCTCAAACAACCCCTGGTGAGTTTAAGCACGTGACCCATAAGAAAAACAACATGTATTCAGGGTAATAGCGATCAAAGTAGCAATATGTGTGTGTGTGTGTGTGTGTGTTTATCAGACATGCTGTGTTCCTCCAGCCTGCCGAACAGCTGTGACTGTAAACAGCAGCAGAGACTGTGGTATATGTTTGACCACGAAATGGTACTTCCAGAATACCTTGTGGACTTTGAATATGTAACCCAGGTATTGGTATATGTTATTATATTTACACTTATACATCCACACTAGAATGTATTAGTCAGTAATTAAATTACGTTTATTTCTCTCTAGGACACAGTCCAGGCTTCTCCAGATTCCCCATCCAGTTATCATATGTCTCCTGCTGATGCCCCATCTGTGTCCTATACTGCGCTGGAACTGGATGAGGAGGCATTAAACATGGAGCCCATCCTGAAGTCCCACCCCAAGATGCTCAGCCTAGATGAGAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa1345
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > C
Consequence:
Essential Splice Site, Missense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000076533 | Essential Splice Site | 586 | 984 | 13 | 21 |
ENSDART00000100719 | Missense | 616 | 1350 | 15 | 30 |
ENSDART00000114995 | Essential Splice Site | 587 | 985 | 14 | 22 |
ENSDART00000141217 | None | None | 258 | None | 7 |
ENSDART00000146752 | None | None | 447 | None | 11 |
ENSDART00000148112 | Essential Splice Site | 365 | 626 | 8 | 13 |
Genomic Location (Zv9):
Chromosome 13 (position 31711812)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 13 | 31357760 |
GRCz11 | 13 | 31488210 |
KASP Assay ID:
554-1259.1 (used for ordering genotyping assays)
KASP Sequence:
CGAAATGGTACTTCCAGAATACCTTGTGGACTTTGAATATGTAACCCAGG[T/C]ATTGGTATATGTTAKTATATTTACACTTATACATCCACACTAGAATGTAT
Long Flanking Sequence:
CTAACAAAATCTTACTGACTTTAAACTTTGGAACTGTGGAATGCATACAATATGAATATCTGTAATATCTGGACGGTCTGACATTTGATTGTGTTTGTTTTCATGCATTTGTTTGCATTTTTAGGTCAGTTAATAATATCTAAAGTGTTCCTGGGTCGTAGTGTTGCAGTAAAGGATGGTCTTCCCATAGACTGCGATCATTATCCCAAGGCAAACTCAGTCTACCTCAGTACCAGCTCTAAACAACAAAGTCACACAGCTCAAACAACCCCTGGTGAGTTTAAGCACGTGACCCATAAGAAAAACAACATGTATTCAGGGTAATAGCGATCAAAGTAGCAATATGTGTGTGTGTGTGTGTGTGTGTTTATCAGACATGCTGTGTTCCTCCAGCCTGCCGAACAGCTGTGACTGTAAACAGCAGCAGAGACTGTGGTATATGTTTGACCACGAAATGGTACTTCCAGAATACCTTGTGGACTTTGAATATGTAACCCAGG[T/C]ATTGGTATATGTTATTATATTTACACTTATACATCCACACTAGAATGTATTAGTCAGTAATTAAATTACGTTTATTTCTCTCTAGGACACAGTCCAGGCTTCTCCAGATTCCCCATCCAGTTATCATATGTCTCCTGCTGATGCCCCATCTGTGTCCTATACTGCGCTGGAACTGGATGAGGAGGCATTAAACATGGAGCCCATCCTGAAGTCCCACCCCAAGATGCTCAGCCTAGATGAGAAAGCCATACTGACAGCGGCCAGAGCGAACATTCTCAGTCAGATCACAGTGAGACTTACAATACCCCAAACACATAAACTCATGCATTTGTAGTATGTAGGTCAGTCAGGCTCTGTTTCTACATTGTATTGACCTGAAGTGGTTGTTCGATGACAAATGATCACACAAGACCATTTCTTATGATGTCAAACATAGTGATATTTTATAAACATATTTCAGGAGAAGCATGCACAGATGTTCTATCTTAAACTTCTTCTTT
Associated Phenotype:
Not determined