ZMP
pdzd7a
Ensembl ID:
ZFIN ID:
Description:
PDZ domain containing 7a [Source:RefSeq peptide;Acc:NP_001177686]
Human Orthologue:
PDZD7
Human Description:
PDZ domain containing 7 [Source:HGNC Symbol;Acc:26257]
Mouse Orthologue:
Pdzd7
Mouse Description:
PDZ domain containing 7 Gene [Source:MGI Symbol;Acc:MGI:3608325]
Alleles
There are 3 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa42176 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa44784 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa42176
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000114718 | Nonsense | 395 | 956 | 7 | 17 |
| ENSDART00000136749 | None | None | 268 | None | 6 |
Genomic Location (Zv9):
Chromosome 13 (position 18780621)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 13 | 18600656 |
| GRCz11 | 13 | 18731648 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CAGAGTCATGTCCACAGAAACTAGTCGAATGGTAGGAGAAACCGTCCTGT[T/A]GAAAGACACTGTAATCCGCAGAGGGACAGCCCATTCCCGGACAAGGACCT
Long Flanking Sequence:
ACCTTTATACTTTTACTCAGTAAAGGGTAAGTTAATGAAGAGAAATAACTTTTAAACAACTTAATTTCTATGTAACTTATCAAAGTTACAAATTATTTTATTGCAATACATAAAAGTTCCATTCAAAATTGGACTGTGAATGACGGAGCTCCAGTGAAATGATCCATAAAAAACGTAAACTTTCTATTTTTCCCTTTCAGTGGCGAACGGAGGTCAGCCGTCGTCCTCTCAGGGCTCAGATTCATACTCCTCCACTTCTTCTCTGTCATCCGGGACGCCGGTCAGCTCTCTCAGCGGCCTCTCGCAGGTCATGTTTCCTCCTGCTTTCGGCTCAGAGATGGTGGACGTCTGCATCTCCACTGAGGATCGCTCGCGGCGGCCCAGCTCAGAGCGAATAGAAACTGCTATTCAGACTGACCCACAGGATCCCGATACCATATCCCGAACCAGCAGAGTCATGTCCACAGAAACTAGTCGAATGGTAGGAGAAACCGTCCTGT[T/A]GAAAGACACTGTAATCCGCAGAGGGACAGCCCATTCCCGGACAAGGACCTTTTCTGCTGGGGATAAAGAGACTCTGGACTCTCCTAAAACTGCTGTCCTGATGGCTCTCAGCAAGCCTCGGAAAGTCATCCGACGATCCCAGAGCCACATCACTGTGTCAGGTACAGTAAAACTGCTCTGTCAGAAAGATGTAGATCAAGGGTAGGGATGAATCAATGAATGAAGATCCTCAGATTGTTTGAAATCTTTATCTAAAATGATTTATGTTTTACCATTTCCACAAAATGATAAAGTTGCCATACAGTGCATTGATTCAATATTGTTAAAATAATGGAAGTATTATATTAATGTTTAATCAATATTCAGTATTGATAATATTTAATATGTAAAGTATTGACCTATAGGTAACTTACAAAAATCTTCAGAAATGGGCTAATATTCACATTCTCAGCCACATGAATTACCCATAGAAGAAAAAACACTGTTTTGACCAAATTTAG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa44784
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000114718 | Essential Splice Site | 661 | 956 | 13 | 17 |
| ENSDART00000136749 | None | None | 268 | None | 6 |
Genomic Location (Zv9):
Chromosome 13 (position 18807939)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 13 | 18627974 |
| GRCz11 | 13 | 18758966 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTCTTGCCCTTTGAGCTTGAAGCCTATGACATACTAAAAAGCCGGTCTGG[T/C]AAGAACCTGTTTTCTTTGAAAAAATAACTTTTTTATTTTAGTTGCTGCAA
Long Flanking Sequence:
GAGTCTCGTGTTTCACTCACATGTATTTTGGAACTGACAAGCATTTTGGTTTACTATAAAATGTTGCCCCGTCTAATCAACCAATCCAAAGAACTTTAACTAATTTAACCAGTGCCTGTTTTAGATATAAACAAATGATCTACAGCTTTGAAAACACTCCTAGATCACTGACTCCAAAAGTTTACACTGTAAACTAGGGCATGTCCTCTACCTGTTCTTCAGTTTCTGGTCGATCGTGTGGTTGAGGATCTAGTGCGCCCCCTGCTGGCCATCTTGGACAAGCCTGAGAAGCTTCTGTTGCTGAGGGAGGTCAGGTGAGCAGTGGAACAATGTCACCCTGTACAATACTTTATTTATATAAATCCTGCATATGTTTACACTATCCATTCTAACGCACTGTTTTGTAGAATGATCATTCCTGCCACAGATCTGGGCCGTTTTGACAGTATGGTCTTGCCCTTTGAGCTTGAAGCCTATGACATACTAAAAAGCCGGTCTGG[T/C]AAGAACCTGTTTTCTTTGAAAAAATAACTTTTTTATTTTAGTTGCTGCAATAAAGTAGGAACTATACAGAAATGTCAGTCAGAAATGTACATATACCTATGGTAGCCCGTTCTCGCCTTTGAAGTCGGAATTGCGAATTATTAAGTCAGAATTCTGAGTTATGAAGTCAGAATTGCGAGTTATGTCAGAATTCTGAGTTATAAAGTCACAGTTCTGATTTGCGAGTTATTAAGTCAAAATTCTGAGTTATAAAGTCAGAACTCTAAGCTAGAATTGTGAGTTATAAAGTCATAATTCTGAGTTAAAAAGTCAAAATTTAGAGTTATGAAGTCAGAATTGCGAGTTATTAAGTCAGAATTGCGAGTTAACTTAGAATTCTGAGTTGTTAAGTCAGAATTCCAAGTTAGTTATTATATCAGAATTTCGAGGTATAAAGTCAGAATTGCAAGTTATTAAGTAGGGATGGGCAGGGTAGGTATAGACAGTAATAACTGTGACGG
Associated Phenotype:
Not determined