Busch Lab

ZMP

lrpprc

Ensembl ID:
ENSDARG00000043970
ZFIN ID:
ZDB-GENE-030131-7887
Description:
leucine-rich PPR-motif containing [Source:RefSeq peptide;Acc:NP_001136064]
Human Orthologue:
LRPPRC
Human Description:
leucine-rich PPR-motif containing [Source:HGNC Symbol;Acc:15714]
Mouse Orthologue:
Lrpprc
Mouse Description:
leucine-rich PPR-motif containing Gene [Source:MGI Symbol;Acc:MGI:1919666]

Alleles

There are 7 alleles of this gene:

Allele Name Consequence Status Availability
sa17469 Nonsense Available for shipment Available now
sa22236 Essential Splice Site Available for shipment Available now
sa22237 Nonsense Available for shipment Available now
sa12060 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa17469
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000034230 Nonsense 409 1461 9 38
ENSDART00000126427 Nonsense 395 1447 9 38
ENSDART00000128868 Nonsense 384 795 9 23
Genomic Location (Zv9):
Chromosome 13 (position 10375319)
Other Location(s):
Assembly Chromosome Position
GRCz10 13 10677648
GRCz11 13 10810123
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CGGTCATGAAAAGACTGCCTTTTCKGTGCTGAAAAGCTWAACCGGGATGT[T/A]AGAYACACATMCGGGTGACACTCCAGATTTTGGMAACTTCTTTCTTCGCC
Long Flanking Sequence:
ATCTCTTGCATATCTCCTCTAGACTCTCGATGTGGTGGAGAACGCAGATTTCTTTCTGATGGACCGAGATCTGATGCAGTTGGTTTCCAGTCTGGCTAGAACTGGCCATGAGCAGCACGTGCCCGAGATTGTGTCACGTATGCGTCATGAGAGAGGATATGTGCCAGGTCTGACATCAGTTTGTCCCTGACCACTTACCACAGTGGTCCATAGTTAACCATAATGGTCGCAAATGTATTCATAACAGTATACTATTTGATGTGTTTTAAATATGAACTCAAACCAATTAGAGAAATGCGATACATAAAACATTGATGCCGTGAGATGAAGTTCTGGGATTTTGGGAAAGCCATTAATGATTGATAGATTTTTTTTATTTTGATCTTGATGCATCCGTTTGCTTCACTTTTTTTCAGATGCTATCAACCTTTGCTTGAATTTGATTACCCACGGTCATGAAAAGACTGCCTTTTCTGTGCTGAAAAGCTTAACCGGGATGT[T/A]AGACACACATACGGGTGACACTCCAGATTTTGGCAACTTCTTTCTTCGCCATTGCGTCAATATGGACAAGGTGAGGGACCCAAACATGACTGTTATGCATATAATTAACTTCTACCAAGCATTGTGCAATACTGAAGCCAGGTTTTTTTAAACTTCACACACATTCAGAATTGCCAACATAATAATTTACCAAACATTTGAGCTTAGACCAACACAACAGTTCATATAACAGACCCCCTAGTTTTTAGCGATTTTATGATTGCTGAATCCAATGTAAAATTAACAATTAACAACGATCCTGCAAAATTTGTTATTAAACACAGAATAATTACACAAAATGTAAATAATCTCATAAAATATCCAATTCAAAACCATAAAATCTAATTATATTTATTTCAGTTTGTAATTAATTGTTTTACATGACTTATTGACATTGCATATGCAGCGCATGTGATTTATTTAAGTGTCTCCTGAAAAATGACGTCTCACATGCACCCTCA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa22236
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > G
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000034230 Essential Splice Site 543 1461 12 38
ENSDART00000126427 Essential Splice Site 529 1447 12 38
ENSDART00000128868 Essential Splice Site 518 795 12 23
Genomic Location (Zv9):
Chromosome 13 (position 10389397)
Other Location(s):
Assembly Chromosome Position
GRCz10 13 10691726
GRCz11 13 10824201
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TATCCTGCCGTCTTTTCCATCATTGGACAATGCTAAGGCTTCTCTTAAGG[T/G]AACTGTACTGGATATGTGAATACATTGTTGGTTTATGTGACTGATTTGGA
Long Flanking Sequence:
ATATGTATATATATATATACTTATATATATATATATATATACATATATACATATATATATATATATATATATACACACATATATATATATATATATATATATATATATATATATATACATACACATACACATACACAAGTATGTATATGTTTATGTAATTTAATTATTTATTTGTTATGTAGATAGACATATGAAGTGTCCTATTTGTCACAAATTTAGTTAGTTTTAGTTTTAGTTAGTTAGTTAGTTTTGCTCAATAGACCTGCAGTCATCCATTCCTAAACTTACTTTGGTGCAGATGAAACCTTTGCATGCCATGATTTACATTTTATAATGCACATTTGATTTCACCAGTTTTTTTTTTGTTTCTTTCTTTTCAGCTATTATAGAAGTTCTGAGAGGCATGCAAGAAATGAGCGTCTCGCCAGATGTTGATGCTTTTAGTTTCTATATCCTGCCGTCTTTTCCATCATTGGACAATGCTAAGGCTTCTCTTAAGG[T/G]AACTGTACTGGATATGTGAATACATTGTTGGTTTATGTGACTGATTTGGAAAACTCTAACATGGGTTTGATAATTGCAGGAGGCCGGTGTTGACGTGAACACAGATGGCTTGATTGTGGCAGAATTACGAGTCCAAGCATATTCTGGAAACCTTGCAAAGCTACTATCTCTGAGTAAGCATTAGCTTCCATGAAAATTACTTTCCCTCAACCACTCTCTGTCAATTTTCCTTATACCTTTACATATATATGCTCATGTTCTTTCACAGACATAACTCTGTGGAGAGATTTATTTTTAGATGTACCCTGTATGATAGCACTAATCACTTAAAGGCTAATAGCCACCTCTCAGAACAGCACACACTAACAGACAGATATATGATCCATTAGGCTTTTTACGTTAGGGTTGTTAAAGTAAAGCACAGAGTCTCTTTATTTCATTCTTTTGCTTCAGGTTGCTTAATTGGAAGACTTCTAAACTTTCCTGTGTCATAAATTGTG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa22237
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000034230 Nonsense 1339 1461 35 38
ENSDART00000126427 Nonsense 1325 1447 35 38
ENSDART00000128868 None None 795 None 23
Genomic Location (Zv9):
Chromosome 13 (position 10475616)
Other Location(s):
Assembly Chromosome Position
GRCz10 13 10777945
GRCz11 13 10910420
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTGTTGAGAGTTTTGAGGTCTCTTGTGTTTCTCTGATTGCTTTAGCGCTG[T/A]GCGGCTGTCGGCGAGCAGAAGGACTTACTGTTCTCCTATGTGTTACGAGC
Long Flanking Sequence:
GAAATTCACCGTGCCTTCGTTTAACTTGCGTTATATTGTCCTGATTAAAGAGTGTGGAAATTGCACACCGACGCTTGAAAGCTCAGGAGCACGCCGATGCAATTCAAAGCCTTTATACGGCTAAGTGTAGATAATTGTACTTTAAATTGGGCGGACACTGTACATTTTAATTTTCATAAAGAAATAAGTGGTTATTTGCCTGACTCCCCTATTAGCTGTATAATTAACCCTCAACTATAGAGCACTGCGCTGAGTGCTAAAGGATGAAATGGAAGATGGATACGCTCAAAAACACACGTTCCCGTCATGCTGTTGTACACACACACACCTCTGTATGCTCCGTATTTTTACTGCCTGCTGTGTGGATTCAAGTAAATGGCAAGGGTTATGTTTTGCTCAAGGGCAGATACTGTGAACACGCTCAGGCGTTTTGATATGCGATAAATGTTTGTGTTGAGAGTTTTGAGGTCTCTTGTGTTTCTCTGATTGCTTTAGCGCTG[T/A]GCGGCTGTCGGCGAGCAGAAGGACTTACTGTTCTCCTATGTGTTACGAGCGTCCCAGCAGCCCGGACAGGTAAACAGAAGCTGTTTGTTTTTATATAGTCCATGCTTTTTGTTTAATTTATGCATGAGTTTTGATCGGAGGAGGAGAATGTTGCACTAAATGGGGACATAGTATGTGAATTAATTAATAAATACTGAATTAATAGCTTGAAGTTGTTTATGAATAATGATGGTTGATTGTCTTTTTGCAGGCTGCTAAAGTCATGAGTCTTATGGAACTGATTCCTGACATTCGAGAGAAGGAGGATATTTATTCGCAGCTGATGAAATGCCATGGTAAGACCACCATTTGGCAGGGGGATTTACAGTACAGAACTGTGCATCGGTGGTCCAATGTGGCAGTATAAATGTTGTTACAAAACATTTGAAGTTAAGGGTTTAAGGAAAATCTGTGTCCACAAAAAACAAAGATGTACCACTTATCTCTGAGTTGTTGATAAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa12060
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000034230 Nonsense 1355 1461 35 38
ENSDART00000126427 Nonsense 1341 1447 35 38
ENSDART00000128868 None None 795 None 23
Genomic Location (Zv9):
Chromosome 13 (position 10475662)
Other Location(s):
Assembly Chromosome Position
GRCz10 13 10777991
GRCz11 13 10910466
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GCTGTGCKGCTGTCGGCGAGCAGAAGGACTTACTGTTCTCCTATGTGTTA[C/T]GAGCGTCCCAGCAGCCCGGACAGGTAAACAGAAGCTGTTTGTTTTTATAT
Long Flanking Sequence:
AAAGAGTGTGGAAATTGCACACCGACGCTTGAAAGCTCAGGAGCACGCCGATGCAATTCAAAGCCTTTATACGGCTAAGTGTAGATAATTGTACTTTAAATTGGGCGGACACTGTACATTTTAATTTTCATAAAGAAATAAGTGGTTATTTGCCTGACTCCCCTATTAGCTGTATAATTAACCCTCAACTATAGAGCACTGCGCTGAGTGCTAAAGGATGAAATGGAAGATGGATACGCTCAAAAACACACGTTCCCGTCATGCTGTTGTACACACACACACCTCTGTATGCTCCGTATTTTTACTGCCTGCTGTGTGGATTCAAGTAAATGGCAAGGGTTATGTTTTGCTCAAGGGCAGATACTGTGAACACGCTCAGGCGTTTTGATATGCGATAAATGTTTGTGTTGAGAGTTTTGAGGTCTCTTGTGTTTCTCTGATTGCTTTAGCGCTGTGCGGCTGTCGGCGAGCAGAAGGACTTACTGTTCTCCTATGTGTTA[C/T]GAGCGTCCCAGCAGCCCGGACAGGTAAACAGAAGCTGTTTGTTTTTATATAGTCCATGCTTTTTGTTTAATTTATGCATGAGTTTTGATCGGAGGAGGAGAATGTTGCACTAAATGGGGACATAGTATGTGAATTAATTAATAAATACTGAATTAATAGCTTGAAGTTGTTTATGAATAATGATGGTTGATTGTCTTTTTGCAGGCTGCTAAAGTCATGAGTCTTATGGAACTGATTCCTGACATTCGAGAGAAGGAGGATATTTATTCGCAGCTGATGAAATGCCATGGTAAGACCACCATTTGGCAGGGGGATTTACAGTACAGAACTGTGCATCGGTGGTCCAATGTGGCAGTATAAATGTTGTTACAAAACATTTGAAGTTAAGGGTTTAAGGAAAATCTGTGTCCACAAAAAACAAAGATGTACCACTTATCTCTGAGTTGTTGATAATAGCATCAAATCAGCATATTAAAATGATTTCTGACAGATCATATGAT
Associated Phenotype:
Not determined