ZMP
six3a
Ensembl ID:
ZFIN ID:
Description:
homeobox protein SIX3 [Source:RefSeq peptide;Acc:NP_571437]
Human Orthologue:
SIX3
Human Description:
SIX homeobox 3 [Source:HGNC Symbol;Acc:10889]
Mouse Orthologue:
Six3
Mouse Description:
sine oculis-related homeobox 3 homolog (Drosophila) Gene [Source:MGI Symbol;Acc:MGI:102764]
Alleles
There is 1 allele of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa42147 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa42147
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000080808 | Essential Splice Site | 231 | 294 | 1 | 2 |
Genomic Location (Zv9):
Chromosome 13 (position 9825770)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 13 | 10128099 |
| GRCz11 | 13 | 10260574 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GGTTTAAAAACAGGAGACAACGAGACAGGGCAGCGGCAGCAAAAAACAGG[T/A]CAGTCATGTTATGTATTGATACGGTTCTACAGAAATTGTGTGCTTCAACA
Long Flanking Sequence:
GGGACATCGAGCGGCTGGGTCGCTTCCTATGGTCGCTTCCAGTGGCACCGGGTGCTTGCGAGGCGATCAACAAGCATGAATCCATCCTACGCGCCCGGGCTGTTGTCGCCTTTCACACCGGCAATTTTCGCGATCTCTACCACATTTTGGAGAACCACAAGTTTACCAAGGACTCGCATGGTAAACTACAAGCGATGTGGCTAGAGGCTCACTATCAGGAGGCCGAGAAACTACGCGGGCGTCCCCTAGGACCGGTTGATAAGTACAGGGTGCGAAAGAAGTTTCCCCTGCCTAGAACCATCTGGGACGGTGAGCAGAAGACGCATTGTTTCAAGGAGCGAACGCGGAGTCTGTTACGAGAGTGGTACCTTCAGGACCCCTACCCAAACCCCAGCAAGAAAAGGGAACTGGCTCAAGCCACTGGACTCACTCCTACACAGGTCGGAAATTGGTTTAAAAACAGGAGACAACGAGACAGGGCAGCGGCAGCAAAAAACAGG[T/A]CAGTCATGTTATGTATTGATACGGTTCTACAGAAATTGTGTGCTTCAACAGTGATATTAAATGTATACTTATTAATGATCTGTTGGGAAATACATAAACACAACGTAGGAAGTGATGCAGTTAAAACAAAATCAAATAGATTATAACGAATACAACAAATGAGGGAGCGAAAACGACGGCTTTTTAGTTGTGTAGGCTAAAATGTTTAGAAAGGCTTAACCAAACACTTTAAGCAAGATAGAACTATTTAATCGTTTTCCTTAAACTATAAATATAAGCTAATAAAAAATGTTTCCTCTGATTAAATTTTACATAATTAAAATAACACATAATCAAACGTGTTTATGCTTCTCAACACAGATATGCTGAGTTATAAAATAGCCTTTTATAGTCTTAGTCATGTGAAGGTTTCTATTTTAATTTACTAAGCTTTGGTCGTAAATTCACAATACATTTTTGCATAATACAAAAGAATAGATGTGGATAACTCCTAAATTTAG
Associated Phenotype:
Not determined