ZMP
nrxn1b
Ensembl ID:
ZFIN IDs:
Description:
neurexin-1-beta [Source:RefSeq peptide;Acc:NP_001073428]
Human Orthologue:
NRXN1
Human Description:
neurexin 1 [Source:HGNC Symbol;Acc:8008]
Mouse Orthologue:
Nrxn1
Mouse Description:
neurexin I Gene [Source:MGI Symbol;Acc:MGI:1096391]
Alleles
There are 7 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa35390 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa35391 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa42109 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa18533 | Nonsense | Available for shipment | Available now |
| sa42110 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
| sa42111 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
| sa22192 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa35390
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000093098 | Nonsense | 23 | 1470 | 1 | 20 |
| ENSDART00000093166 | None | None | 448 | None | 7 |
Genomic Location (Zv9):
Chromosome 13 (position 605420)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 13 | 603403 |
| GRCz11 | 13 | 733694 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGGGTGCTCATCTGCTTTTTATCGGACTAATTGTATGTAAAGCGAACGCT[G/T]GATCTAGTCTCAGGTTTACAGGATCCGACGAACAATGGGTTGCGTTTCCG
Long Flanking Sequence:
GTCATACTCTGATTTGTAATTGATAACACATTAAAATCATAGTCATAATCTGATTACAAGTCATAATCATTTTATTCGATGTAGTTAATATAGTTTAAGCTAAGAATAACTTAGTAACTGTAATAAATCTGGGTTTTTTATTAATTTACTAAGGAAAATTGATTGTAAAGTGTTAACTATTGTACTTTATCCATTTAATTTAGTTAAACGCTCTTTTTTTATATACAGTAAAGCAATACACTAGGTATTGTTTCGTTATTATACCTTTTAAAATAACCTTTTTTGCAGTTTAGCCCAATATTGTGATGATACCGTCTACCAATCTGCAATTAATTGCAACAATAACATCTGGTGCCACCTTAAACCTACTTTGGCATGCATAATTTGGAGATTTCCTATAGATTATTATTATTATAAACATGCCAAACATCTTCATGATGATTCTTCACTTGGGTGCTCATCTGCTTTTTATCGGACTAATTGTATGTAAAGCGAACGCT[G/T]GATCTAGTCTCAGGTTTACAGGATCCGACGAACAATGGGTTGCGTTTCCGATGTGGAACGCTTGCTGCGAGAGCGAAATGAGCTTCAGTGTGAAAACCACACATCTGAATGGCCTCCTGGTGTACTTTGATGACGAAGGCTTCTGCGATTTCCTCGAGCTGCACGTGCACGTTGGGAAACTCAGATTGTGCTTTTCTATTTTCTGTGCCGAGTCCACATGCGTGCTTTCTGACGTCGCCATCAATGACAACCGATGGCATTCGGTCTCGATTATGAGGAACTTCAGAAACACCACACTCATCGTGGACGACGAGGTAAAGTGGGAGGAGGTTAAATCCCAAAGGCGAGACATGACGGTTTTCAGCCACTTATTTTTAGGAGGGATTCCCTCAGAGCTGAGGTCGGTGTCTTTACAGCTGACGTCCAAGACTGTGAAAGATCACACTTCGTTTACGGGCTGGATAATGGATGTGAAAGTCAACGATTCTGAGCCTGCGATA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa35391
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000093098 | Nonsense | 405 | 1470 | 5 | 20 |
| ENSDART00000093166 | None | None | 448 | None | 7 |
Genomic Location (Zv9):
Chromosome 13 (position 616792)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 13 | 614775 |
| GRCz11 | 13 | 745066 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGCACAGCCGACCTGCCCGAATCTCCTGTCAGCAACAACTTCATGGGCTG[T/A]CTGAGGGAGGTAAAGAAACTGCCACACCAAATCAGTGCAGGCTGTGTAGA
Long Flanking Sequence:
ATGGATTTGAGATGAAATGAACAAGATGTCCTGTCCAACTTCATCCTGTCACATGTAATTTGCATATATTGTCGTTTATCAGATGTCTATATGGGGACTCAAGTAATAAACAGAAGAGTGGGAGCCGCTCTAATATGGAAAAGTTTATTCCATTATTTTGGCGGTGGCACTGCAAAGTCATGATCACCTTCAGCCAATAGACTGGCATGATTCTGTAGGGCTTCAGATCTGATGTGCTTTCCATTGCATCATCATTATGCAGCATTCATATGAAAGAGACTGAAGGATCAGGAGTTCAGAAAGTATCCAGCTGCTCTCCTCCTCCTCCTCCTGTGGTTTGTTTTGCAGGTTACGATATCTGTGGACGGAATACTGACCACCACAGGATACACTCAGGAGGAGTACACCATGCTCGGCTCTGATGACTTTCTGTATGTCGGAGGGAGTCCCAGCACAGCCGACCTGCCCGAATCTCCTGTCAGCAACAACTTCATGGGCTG[T/A]CTGAGGGAGGTAAAGAAACTGCCACACCAAATCAGTGCAGGCTGTGTAGAGCTTAGAGTCACAATCGAATCACAATGAAGTGTGCTCATATTTGTAGATAGTTGTGTTTGTTATATGCAGTATATCTGTCACGTCATTATTTAGCAAAAATTAATATGCCCTCTACCTTTCATTTTTGTTAAAATTAAATACATTTTTATCTACCTTTAGGGTGGACCTATGAGTCTCTTGGGGCGGGGCTATCACTCATTTGAGGCAGAGCTACAAGTCAATTAGGGCGGAGCTAACTGTCATTTAGGATGTGGATCTTTGGGCAGGGCTACCAGTCATTTAGGGTGTGGCTATAAGTCATTTAGGGTGGGACTATCTGTGTTTTAGGGCAGGGCTGTCAGTCATTTAGGGTGTGGTTATCAGTCTTGTGGCAGGACTATTAGTGTTTAAGAAGGAGGCTATCGTTCATTTTGGGCAGGGCTATCAGTTATTTAGGGCATGGTTATCAG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa42109
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000093098 | Nonsense | 562 | 1470 | 7 | 20 |
| ENSDART00000093166 | None | None | 448 | None | 7 |
Genomic Location (Zv9):
Chromosome 13 (position 622569)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 13 | 620552 |
| GRCz11 | 13 | 750843 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCGTATTCTTCAGTGTTCTCTCTGAACCGCAGGCACCATCTCCATCAACT[C/A]AGTGCGCACCCCGTACCTGTGCCCCGGAGACAGCGAGCTCCTGGATCTGG
Long Flanking Sequence:
GTGTTCGTTGCCCTTGTCTGCTTGGTCCCTCACAGTATCCAATAAATTGTTACGATTTTTGACATGGAAGAAAAACCTCTCCTGACCTTTTTTTCTTGAACACGAATGAGATTGATTTAATATTCCAACAATATACATTTATGAATGGATTATGTCAAAGTGTTTCTAATGCGGCGGGCGTTTATAGGGCTGAGAGTAAATCTGACATTAGTCAAGGAGAAAAACTCCACAATGGTGTTATCAAGCCTTTCAGAAAGAGGAAAATAACAGTGTAAGAGTGATGTCATTTCAAAACGAAAATCTCGATTATTTCTTTTGCCCCAGTGTCAGATTATTTTGCTTGTTTTAAGCAAAAACTCACTTAATTTTAATGCATTATTTCTAATACCAAAATTATAGTTTTAATTTGTCCAGAAAACACTTCTTGATTTAAGAGTGTTCGAATATTAAGCGTATTCTTCAGTGTTCTCTCTGAACCGCAGGCACCATCTCCATCAACT[C/A]AGTGCGCACCCCGTACCTGTGCCCCGGAGACAGCGAGCTCCTGGATCTGGATGATCCCCTGTACCTGGGCGGCGTTCCGGAGAGCTCCAGTGGGACGGTGTTCCCCACTGGGGCCTGGAGCGCCCTGCTGAACTACGGGTACGTGGGCTGTGTGCGGGATCTGTTCATCGACGGGCGCAGTGTGGATGTCCGGCGCGCAGCAGAGCTGCAGAGAGCTGCAGGAGTGAAGCCGTCCTGCGGTAAAGAGCCGCCCGGGAAGTGTGTGAGCGAGCCCTGCCTGAACAGAGGAGTCTGCAGGGAGGGATGGAGCCGATATATCTGCGACTGCACCGGGACGGGATTCCTGGGACACTCCTGCGAGAGAGGTGTGTGTGTATGAGTGCGAGAGTGTGTTTGATAATGATAATGATGCGGATCTTTCCGTCTGCAGACGCCACCATCCTCTCTTTCGATGGCAGCAAGTTCCTGAAGGTGCAGTTTTCTGCAGCGATGCACACCGA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa18533
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000093098 | Nonsense | 897 | 1470 | 11 | 20 |
| ENSDART00000093166 | None | None | 448 | None | 7 |
Genomic Location (Zv9):
Chromosome 13 (position 632135)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 13 | 630118 |
| GRCz11 | 13 | 760409 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TGCTCCAGCTACGTGACGCTRCCGTCTTTACAGGCGTATTACTACATGTA[C/A]CTGTTTTTCCAGTTCAAGACCACCTCCGCAGACGGACTCAYACTCTAYAA
Long Flanking Sequence:
TACATGTCACTTTAAGCTGAACACTAGTGTCTTGAAGAATATCTAGTCTAATATTATGTGCTGTCATCATGGAGAAGAGGAAACACATCAGCTATTAGAGATGAGTTATTAACACTATTATGATTAGAAATGCGCTGAAGAAATCTGCTCTCTGTTAAACAGAAATTAATAATTCGGGAGGGCTAATAATTCTGACTTTTATACATAAAAACAGGAGAGATACCAGGCGACCACACGCAGCTAGAGTTTCACAACATCGAGACCGGCATCATTACAGGAAAACGCCAGTTACCCACAATGCCCTCCAACTTTATTGGACATCTCCAGAGCCTGATGTTTAATGGTAAGCCGTACATCGACCTGTGCAAGAACGGAGACATCGATTACTGCCAAACCAACGCTCCAATCGGCTTTAAGAGCATCATCGCAGATCCGGTGACGTTCAAGTCCTGCTCCAGCTACGTGACGCTGCCGTCTTTACAGGCGTATTACTACATGTA[C/A]CTGTTTTTCCAGTTCAAGACCACCTCCGCAGACGGACTCATACTCTATAATAGTGGAGATGGCAATGATTTTATCGCTGTAGAGCTGGTGAAAGGGTAAGTTATGGACAACACGGGCTCAATGGGAAAATGTGCTACTGCAAAACATTTGTTTCTAGGGTAGGGTTGCAAATAAAACACTTCAAAATCAATGATTACAGGCACAACGTTAAATATCGCTAAATAAAATGCGACATGTAAGCATTGCACTTTCAAGATGGCAACTTTCTCACAATGAACCAGAAGCTTTTATTAATCTTAGCTGTTAAAATAAAAGTTGTAAACATTTTCTGAAACAAAAATAGTAAATAATGAAATTCTGTTGCATTTTTTAGCTAATATTAAAGTAGTAGCTGTAATAAATGTGGTTATTTCACACTGTTGATTTGAATTAAATGCTTTTTAGCAGCTTCGGTTAATATGATAATATCGTATACTGTATTTTCTATACCATTTATTAAC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa42110
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000093098 | Essential Splice Site | 1050 | 1470 | 13 | 20 |
| ENSDART00000093166 | None | None | 448 | None | 7 |
Genomic Location (Zv9):
Chromosome 13 (position 634076)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 13 | 632059 |
| GRCz11 | 13 | 762350 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GATGACCGAAGCGCTGGTCTGTGTCGGGCAGATCGAGAGAGGATGTGAAG[G/T]TAATAAACGTTTTTTTAAAAACATTTTACGGTCAGTATTTGTTTTAGATT
Long Flanking Sequence:
CTTCCCTCTTTGGGATGGAACCACGAGGCGACGTTCATTCACAGAACGCAAGTTTCTGGAGGACACATACATCTGCAGAAGTGAGAGCAGATAAGGAGCAGCAAAGCCAGAAGTGGCTTTGTAAGCAAACATCAGAGCTTTGAATTTGATGCGAGCAGCAACTGGCAGCCAGTGCAAACGGATGAGCAGCGGAGTGACATGTGCTCTTTTAGCTTCATTCAAGAGGTTCATTATTAAGGCTAAACTGCTTTTATTAAGAAACTGTTGTTGCTTGTCAACTATAATCCAACTTCTTCTAATCCCGTATTCTCTGGCTGTGTTTGCAGGTGATTTGTTTGTGGGTGGTGTTCCAGAGCAGATGTATAAAGATCTGCCCAAGTTAGTTCATGCAAAAGAAGGGTTTCAGGGCTGTCTGGCGTCTGTGGATCTGAACGGGCGTTTGCCAGACCTGATGACCGAAGCGCTGGTCTGTGTCGGGCAGATCGAGAGAGGATGTGAAG[G/T]TAATAAACGTTTTTTTAAAAACATTTTACGGTCAGTATTTGTTTTAGATTAGAAATTGGGGAAAATATATACGTATTATAAGCCGATATCGCAGTAAGGGTAATCAATGACACATGAGTCTGCTGTGAATCCTTTCCTCATCTCTATTTTGCAACCCAGGCTCATTTTGAAAACGTAGTCCAGCGGACGTTTCTGGAGACCGCGAAAAATGTCCTGGGAGGTACGTATTTGTGCAGTTTTTGTTTTCGCGAATCCGCGAGAGGCCGCTGTGCGCGCTTTTTCGTATCCCAAACGTCTCTCGCGAGTGCCGTTTGCACCCGTGCTGTTCTCGCGTCAACCCACCAGAGGCCGCTGTCTGACTGACCGAATGATTGACTGCGCGACCGGCCAATCGGCTGACCCACCCTCCTCCTTCCCTGAACCCAACCAGTTTTACCGATTGACCCGCCCGCCCGCTCACTTCCCTAAACCCGAGCAACAATTTAGAAAAACCGTCTAGA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa42111
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000093098 | Essential Splice Site | 1235 | 1470 | 17 | 20 |
| ENSDART00000093166 | Essential Splice Site | 213 | 448 | 4 | 7 |
Genomic Location (Zv9):
Chromosome 13 (position 669411)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 13 | 667394 |
| GRCz11 | 13 | 797685 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GGTAGACTTCCATATCGGCGGCTAGTTGAAGAATCGCTACCGAAGAACGG[T/C]AAAAACCAGGATAAAGCTTAAGTAATACTATTTTAACAGTTTTAACAGTA
Long Flanking Sequence:
AAATCAGTGCATAGCGAGACCGAGCATTTACAGTGACCAAACACAAACCAAAACGTTTAAAGAGGTGCAGAACTCTTTCTTACTATTCTTTCTGTTTATTAAATTGACATGCTTATAAAGCAATAGTGCAAAATAAATATGTCTTACTGCAAATAGTGTTTGGACAACAGTTGCAGGATGACACTGTATATCTGTAACAAAATATAAAACATTCAAAGTATTTTAAACAGCCACTACAAATGTGCTAGGAGCCCTAGGAGGTTAATTCTGTATATATATAGTCATCTGTACACAGTCTATGCTGCTATAAACTAAATTAAGTGTAAAATATATGTAAATGTAAACATAAGAGCTTAAGTATTCAGTTTTTAACCTTTGACCTTGTAATTTAACCAATGAAATGTCTTTTTAAACTTTAAAGGACACATTGATAGTCACCGGCTGGGAACTGGTAGACTTCCATATCGGCGGCTAGTTGAAGAATCGCTACCGAAGAACGG[T/C]AAAAACCAGGATAAAGCTTAAGTAATACTATTTTAACAGTTTTAACAGTAGTATTTTTGCTTTAAAGCAATAATTTAATCATTAATTGATATTAAAGTAAGCTATTTAAATAGGGCACGCTTGGAATAATGTATTAATGATAACTAGTTTGTTTAAACACTCAGTTAAAGGGACTGTACATTTAAAATAATTTCAACTATATATAATGTAAAGATTTTTGATAAATTAATTAAGTGTAATGTAAAATTTTGATCTAATAACTGTAGCATGTGTCTGTGATGAATTAAGAACCTGGCACAGTAAATAGACCATATTTAATCATGTGATTTAGAAATAAAACAATAAATAGTATTTCAATATATATATTTTAAAGTAACAAGCTTGAGTCCCTTTAACAAGATTTTACATCAATAAAAATGAGATAAATGATAATAAGTTATTTAAATGCATGTCTGATTTGAGATTTTAATATGCAGTGTGCCTCCGCCGTCGCTGTTCTG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa22192
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000093098 | Nonsense | 1437 | 1470 | 20 | 20 |
| ENSDART00000093166 | Nonsense | 415 | 448 | 7 | 7 |
Genomic Location (Zv9):
Chromosome 13 (position 679900)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 13 | 677883 |
| GRCz11 | 13 | 808174 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TACCGCAACCGAGACGAGGGGTCGTACCATGTGGACGAGAGCAGAAACTA[C/A]ATCTGCAACTCCAACGGAGCCGCGCTGAAGGAGAAAAACACTGCAGACGA
Long Flanking Sequence:
AAAGTGATTGACAGGTGGTGATTATGTGTGTGTCTTGCCTTTATTCATTTACTGTATGATTTGTTTATGGGTAAAACAAAGACCATGCAGGTCAGGTAGTTTAAACGGTAGGCTACAAATAATTAATTGGTCATTAATTAATGAATTATTCATAATCGAAAATCGAATCGAATCGTGCCTTTAGAATCGAAAATGTAATCGAATCGAGGATTTGGAGGATCGTGACACCCTTAATATCTACTGTGAAAGCGCTATACTAGTTAACTTGAATTGACTAAAGGGACCCTGTGTTGTTTTGTTCCTCCAGCGGGCCCCACAGGCCCCGCGATCAGCAGTTTTCCAGGCCCGGCGGAGGTTTTCCGGGAGTCCAACGGCACCACAGGGATGGTGGTGGGCATCGTGGCGGGCGCGGCGCTCTGCATCCTCATCCTGCTCTACGCCATGTACAAATACCGCAACCGAGACGAGGGGTCGTACCATGTGGACGAGAGCAGAAACTA[C/A]ATCTGCAACTCCAACGGAGCCGCGCTGAAGGAGAAAAACACTGCAGACGACGACAGCGGGAGCAAGAGCAAGAAGAACAAAAACAAGGAGTATTACGTGTGATCCAATAATCCTGCAAACACTCAGAGTTTGTGTCTTGTTTCTAGAGCAGATATCTAAAACCTCTTTAATCAAGAAGTATCTTCTAGATGAGCACTAAATGTAGTGTTGTTCTCAGAAATAATGAGTCAAAATGAAGGGAGTTTCTCATTAAAACAAGCAGAATAATCTGACACTGGGGGAAGCAGAATTCACGACACACTGAGGACTGAACACAGGAGGTCAGTATATACACAATGTTTTATCAACAAAGTTAATAATGAAGCTTAACTGAGTTTGTGGAGATTAAGGACACACGACACATAAACATGAGTCCAGGAAGACGAGGAACACAGGGACGCTAGAACAGGAGAAAAGCTGGAGAGGGATTGGATGAAACTCAATGGCTGTTTCTCAATTCT
Associated Phenotype:
Not determined